>7LESS_DROVI (P20806) Protein sevenless (EC 2.7.10.1)|
          Length = 2594

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 35/109 (32%), Positives = 45/109 (41%), Gaps = 11/109 (10%)
 Frame = -2

Query: 331  CSLQYFVLSKLHPYCTPHSSPPLNWINRQLDLSKNEEAQDQEMNKRSLHSTVDLTLRVMR 152
            CSLQ   LS       P    P+  +N QL+LS +  +   E+  RSLHS   LTL + +
Sbjct: 1727 CSLQLPALS-----AAPDCPLPVPGLNYQLNLSSSSRSAQLEL--RSLHSAAGLTLNISQ 1779

Query: 151  TPLVHADRLEEAQES---GRIGGHKL--------PRIANPSAPDLISGR 38
                 A  L     S    ++G   L           A PSAP   SGR
Sbjct: 1780 LQPYQAYELRAQVGSYYQQQLGQEPLQLPVLTLHTAAATPSAPRNFSGR 1828

>SYFA_BARQU (Q6G0Y4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 361

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = -2

Query: 271 PPLNWI-NRQLDL--SKNEEAQDQEMNKRSLHSTVDLTLRVMRTPL 143
           P LN + NR L+L   K +  + Q MNKR    TVD+TL V  +PL
Sbjct: 58  PVLNGLKNRVLELWVQKRDLLRRQAMNKRLSRETVDVTLPVRSSPL 103

>Y8I5_ENCCU (Q8SU92) Hypothetical protein ECU10_1850|
          Length = 268

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
 Frame = +2

Query: 107 RFLRLLQPIRMD----------QWSSHN-PQG*INSTVQ*PLVHFLVLGFFILAQVQLSV 253
           RF+ LL P               W SHN P+G +++T+   L + L L F I++ + ++ 
Sbjct: 56  RFITLLLPFSYSAVQYAVLLHTNWKSHNKPEGILHTTLYYTL-NLLFLAFSIISILSITT 114

Query: 254 DPIQRWR 274
            PI +W+
Sbjct: 115 LPINKWK 121

>Y304_ENCCU (Q8SW83) Hypothetical protein ECU03_0040|
          Length = 268

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
 Frame = +2

Query: 146 WSSHN-PQG*INSTVQ*PLVHFLVLGFFILAQVQLSVDPIQRWR 274
           W SHN P+G +++T+   L + L+L F I++ + ++  PI +W+
Sbjct: 79  WKSHNKPEGILHTTLYYTL-NLLLLAFSIISILSITTLPINKWK 121

>GP53_BPSP1 (O48407) Putative gene 53 protein|
          Length = 221

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -2

Query: 247 QLDLSKNEEAQDQEMNKRSLHSTVDLTLRVMRTPLVHADRLEEAQE 110
           +L +  N+E Q  +  ++SL S  + TL    +P   AD LEE +E
Sbjct: 94  RLQILVNKEVQGSQSTQQSLSSVFESTLEKYNSPDDFADYLEETEE 139

>TRPB_CHLTE (Q8KF11) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 400

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 13/80 (16%)
 Frame = -2

Query: 226 EEAQDQEMNKRSLHSTVDLTLR--VMR-TPLVHADRLEEAQESGRI----------GGHK 86
           EE   +  N    H T+D  LR  V R TPL HA RL E Q   +I          G HK
Sbjct: 36  EEEYLKAKNDPEFHQTLDNLLRHYVGRPTPLYHASRLSEKQGGAQIWLKREDLCHTGAHK 95

Query: 85  LPRIANPSAPDLISGREGRR 26
              I N     L++ R G++
Sbjct: 96  ---INNALGQVLLAKRMGKK 112

>RS14_LEIXX (Q6ABY6) 30S ribosomal protein S14|
          Length = 101

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -2

Query: 157 MRTPLVHADRLEEAQESGRIGGHKLPRIANP---SAPDLISGREGRRSSK 17
           ++  LV  +  +E++E+ R+G  KLPR A+P      D + GR     SK
Sbjct: 27  LKKALVDPNGTDESREAARLGLQKLPRDASPIRVRNRDAVDGRPRGNLSK 76

>OPSR_ORYLA (P87367) Red-sensitive opsin (Red cone photoreceptor pigment)|
           (KFH-R)
          Length = 357

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +3

Query: 138 WTNGVLITLKVRSTVLCSDLLFISWSWASSFLLKSSCLLIQFKGGDECGVQ 290
           W  G ++   V S V C+  +F  WS      LK+SC    F G D+ GVQ
Sbjct: 165 WAIGGIVFSWVWSAVWCAPPVF-GWSRYWPHGLKTSCGPDVFSGSDDPGVQ 214

>NET1_MOUSE (O09118) Netrin-1 precursor|
          Length = 604

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 50  KIRGRRICNSGELVASNPPRFLR-LLQPIRMDQWSSHN 160
           ++R   +CNS +   ++PP FL  L  P  +  W S N
Sbjct: 87  RVRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCWQSEN 124

>UBP10_MOUSE (P52479) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 10)
           (Ubiquitin-specific-processing protease 10)
           (Deubiquitinating enzyme 10)
          Length = 792

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = -1

Query: 332 LLSAVFRAFKASSILYSTLISTFELDQQTAGLEQE*RSPGPRNEQEVTAQ 183
           LLS        S+   S LI   EL+    G E E    GP+N+  +T Q
Sbjct: 539 LLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSEDEWEQVGPKNKTSITRQ 588

>USPE_PHOLL (P60005) Universal stress protein E|
          Length = 314

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 229 NEEAQDQEMNKRSLHSTVDLTLRVMRTPLVH 137
           NEE+   E+N + +  T +L  +VM+ P +H
Sbjct: 164 NEESYHHELNLKLVKETQELANQVMKNPEIH 194

>TAAR1_PANTR (Q5QD29) Trace amine-associated receptor 1 (Trace amine receptor 1)|
           (TaR-1)
          Length = 339

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 165 KVRSTVLCSDLLFISWSWASSFLLKSSCLLIQFKGGDE 278
           K+   V+C  ++FISWS  + F      L + FKG +E
Sbjct: 134 KINILVICV-MIFISWSVPAVFAFGMIFLELNFKGAEE 170

>ILVE_RICCN (Q92I26) Probable branched-chain-amino-acid aminotransferase (EC|
           2.6.1.42) (BCAT)
          Length = 290

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +3

Query: 33  PSLPEIRSGAEGFAIRGSLWPPIRPDSCASSSRSAWTNGVLITLKVRSTVL 185
           PS+P  RS  +G  +  S W    PDS    S+SA    + IT K  +  L
Sbjct: 125 PSMP--RSFEKGINLHVSRWRKAMPDSTPVQSKSAAQYNMAITSKKEAKAL 173

>SYS_TREDE (Q73KB2) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 422

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = -2

Query: 253 NRQLDLSKNEEAQDQEMNKRSLHSTVDLTLRVMRTPLVHADRLEEAQESGRIGGHKLPRI 74
           N Q D + N ++  Q+++       VD    +          L EA+++      K+P +
Sbjct: 46  NLQKDRNDNSQSMKQKLSPEERQKLVDQGKAIKEKIAQVEAELAEAEKALHEAVSKIPNM 105

Query: 73  ANPSAP 56
           A+P AP
Sbjct: 106 AHPEAP 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,435,380
Number of Sequences: 219361
Number of extensions: 889439
Number of successful extensions: 2897
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2897
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)