ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl25a08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 135 bits (68), Expect = 8e-29 Identities = 119/136 (87%) Strand = Plus / Plus Query: 134 ggtttggcgacatggtctggggcaaggtgaagtctcatccgtggtggccgggccacgtct 193 |||| ||||||||||||||||||||||| ||||| || ||||||||||| |||||||||| Sbjct: 28712 ggttcggcgacatggtctggggcaaggtcaagtcccacccgtggtggcccggccacgtct 28771 Query: 194 acagcctcaccctctccgacgacccggaggtgcatcgcggctaccgccatggcctcgtcc 253 ||||| |||||||| || |||| |||||| | || ||||||||| | |||||||||| Sbjct: 28772 acagcatcaccctcaccagcgacggggaggttcgccggggctaccgcgacggcctcgtcc 28831 Query: 254 tcgtcgccttcttcgg 269 |||||||||||||||| Sbjct: 28832 tcgtcgccttcttcgg 28847 Score = 71.9 bits (36), Expect = 1e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 7 aagcccaaaccgggagaccccgcacctaaatctagggtttcgcttcccctccgcaggatg 66 ||||||||| || ||||||||||| | |||||||||||||||| ||| |||||||||||| Sbjct: 28522 aagcccaaatcgagagaccccgcaaccaaatctagggtttcgcctcctctccgcaggatg 28581 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 gccgccgccggctccggcgccg 97 |||||||||||||||||||||| Sbjct: 28627 gccgccgccggctccggcgccg 28648
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 135 bits (68), Expect = 8e-29 Identities = 119/136 (87%) Strand = Plus / Minus Query: 134 ggtttggcgacatggtctggggcaaggtgaagtctcatccgtggtggccgggccacgtct 193 |||| ||||||||||||||||||||||| ||||| || ||||||||||| |||||||||| Sbjct: 117199 ggttcggcgacatggtctggggcaaggtcaagtcccacccgtggtggcccggccacgtct 117140 Query: 194 acagcctcaccctctccgacgacccggaggtgcatcgcggctaccgccatggcctcgtcc 253 ||||| |||||||| || |||| |||||| | || ||||||||| | |||||||||| Sbjct: 117139 acagcatcaccctcaccagcgacggggaggttcgccggggctaccgcgacggcctcgtcc 117080 Query: 254 tcgtcgccttcttcgg 269 |||||||||||||||| Sbjct: 117079 tcgtcgccttcttcgg 117064 Score = 71.9 bits (36), Expect = 1e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 7 aagcccaaaccgggagaccccgcacctaaatctagggtttcgcttcccctccgcaggatg 66 ||||||||| || ||||||||||| | |||||||||||||||| ||| |||||||||||| Sbjct: 117389 aagcccaaatcgagagaccccgcaaccaaatctagggtttcgcctcctctccgcaggatg 117330 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 76 gccgccgccggctccggcgccg 97 |||||||||||||||||||||| Sbjct: 117284 gccgccgccggctccggcgccg 117263
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 135 bits (68), Expect = 8e-29 Identities = 119/136 (87%) Strand = Plus / Plus Query: 134 ggtttggcgacatggtctggggcaaggtgaagtctcatccgtggtggccgggccacgtct 193 |||| ||||||||||||||||||||||| ||||| || ||||||||||| |||||||||| Sbjct: 2750386 ggttcggcgacatggtctggggcaaggtcaagtcccacccgtggtggcccggccacgtct 2750445 Query: 194 acagcctcaccctctccgacgacccggaggtgcatcgcggctaccgccatggcctcgtcc 253 ||||| |||||||| || |||| |||||| | || ||||||||| | |||||||||| Sbjct: 2750446 acagcatcaccctcaccagcgacggggaggttcgccggggctaccgcgacggcctcgtcc 2750505 Query: 254 tcgtcgccttcttcgg 269 |||||||||||||||| Sbjct: 2750506 tcgtcgccttcttcgg 2750521 Score = 71.9 bits (36), Expect = 1e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 7 aagcccaaaccgggagaccccgcacctaaatctagggtttcgcttcccctccgcaggatg 66 ||||||||| || ||||||||||| | |||||||||||||||| ||| |||||||||||| Sbjct: 2750196 aagcccaaatcgagagaccccgcaaccaaatctagggtttcgcctcctctccgcaggatg 2750255 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 gccgccgccggctccggcgccg 97 |||||||||||||||||||||| Sbjct: 2750301 gccgccgccggctccggcgccg 2750322 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 14684242 ccgccgccgccggcgccggcgccg 14684265
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 91.7 bits (46), Expect = 1e-15 Identities = 112/134 (83%) Strand = Plus / Plus Query: 134 ggtttggcgacatggtctggggcaaggtgaagtctcatccgtggtggccgggccacgtct 193 |||| ||||||||| ||| ||||||||| ||||| || || |||||||| |||||||||| Sbjct: 5006322 ggttcggcgacatgatctagggcaaggtcaagtcccacccatggtggcccggccacgtct 5006381 Query: 194 acagcctcaccctctccgacgacccggaggtgcatcgcggctaccgccatggcctcgtcc 253 ||||| |||||||| || ||||| |||||| | ||||||||| | ||||| |||| Sbjct: 5006382 acagcatcaccctccccaacgacggggaggtttgctggggctaccgcaacggccttgtcc 5006441 Query: 254 tcgtcgccttcttc 267 |||||||||||||| Sbjct: 5006442 tcgtcgccttcttc 5006455 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcg 94 ||||||||||||||||||||| Sbjct: 24658388 ccgccgccgccggctccggcg 24658408 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 gccatggcctcgtcctcgtcgcct 262 ||||||||| |||||||||||||| Sbjct: 19744448 gccatggccacgtcctcgtcgcct 19744471
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 91.7 bits (46), Expect = 1e-15 Identities = 112/134 (83%) Strand = Plus / Plus Query: 134 ggtttggcgacatggtctggggcaaggtgaagtctcatccgtggtggccgggccacgtct 193 |||| ||||||||| ||| ||||||||| ||||| || || |||||||| |||||||||| Sbjct: 48436 ggttcggcgacatgatctagggcaaggtcaagtcccacccatggtggcccggccacgtct 48495 Query: 194 acagcctcaccctctccgacgacccggaggtgcatcgcggctaccgccatggcctcgtcc 253 ||||| |||||||| || ||||| |||||| | ||||||||| | ||||| |||| Sbjct: 48496 acagcatcaccctccccaacgacggggaggtttgctggggctaccgcaacggccttgtcc 48555 Query: 254 tcgtcgccttcttc 267 |||||||||||||| Sbjct: 48556 tcgtcgccttcttc 48569
>ref|XM_450767.1| Oryza sativa (japonica cultivar-group), mRNA Length = 252 Score = 50.1 bits (25), Expect = 0.004 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 76 gccgccgccggctccggc-gccgtcgtgcccgccggc 111 |||||||||||||||||| |||||||||||| ||||| Sbjct: 186 gccgccgccggctccggcggccgtcgtgcccaccggc 150
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.004 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 76 gccgccgccggctccggc-gccgtcgtgcccgccggc 111 |||||||||||||||||| |||||||||||| ||||| Sbjct: 12659409 gccgccgccggctccggcggccgtcgtgcccaccggc 12659445 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggc 93 |||||||||||||||||||| Sbjct: 21980204 ccgccgccgccggctccggc 21980185 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||| ||||||||||||||| Sbjct: 11816074 ccgccgccaccggctccggcgccg 11816097
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 50.1 bits (25), Expect = 0.004 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 76 gccgccgccggctccggc-gccgtcgtgcccgccggc 111 |||||||||||||||||| |||||||||||| ||||| Sbjct: 125347 gccgccgccggctccggcggccgtcgtgcccaccggc 125383
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccgtcg 100 |||||||||||||| |||||||||||| Sbjct: 66481 ccgccgccgccggcgccggcgccgtcg 66455
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccgtcg 100 |||||||||||||| |||||||||||| Sbjct: 29294 ccgccgccgccggcgccggcgccgtcg 29320
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccgtcg 100 |||||||||||||| |||||||||||| Sbjct: 7116074 ccgccgccgccggcgccggcgccgtcg 7116100 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 23340474 ccgccgccgccggcgccggcgccg 23340497
>dbj|AK100802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K14, full insert sequence Length = 2509 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccgtcg 100 |||||||||||||| |||||||||||| Sbjct: 1839 ccgccgccgccggcgccggcgccgtcg 1813
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccgtcg 100 |||||||||||||| |||||||||||| Sbjct: 7182045 ccgccgccgccggcgccggcgccgtcg 7182071 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 23650384 ccgccgccgccggcgccggcgccg 23650407
>gb|AC107703.10| Mus musculus, clone RP23-472H1, complete sequence Length = 215019 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 191 tctacagcctcaccctctccga 212 |||||||||||||||||||||| Sbjct: 170048 tctacagcctcaccctctccga 170027
>emb|X57276.1|ZMBPERU Z.mays B-Peru gene for a regulatory protein Length = 1970 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 ggctccggcgccgtcgtgcccg 106 |||||||||||||||||||||| Sbjct: 1762 ggctccggcgccgtcgtgcccg 1783
>gb|AC159630.2| Mus musculus BAC clone RP24-173F2 from chromosome 12, complete sequence Length = 163528 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 191 tctacagcctcaccctctccga 212 |||||||||||||||||||||| Sbjct: 11317 tctacagcctcaccctctccga 11296
>gb|AF466203.1| Zea mays clone ZMBBb_0092E12, partial sequence Length = 147198 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 ggctccggcgccgtcgtgcccg 106 |||||||||||||||||||||| Sbjct: 26567 ggctccggcgccgtcgtgcccg 26588
>gb|U27483.1|SHU27483 Suid herpesvirus 1 glycoprotein gII mRNA, partial cds Length = 399 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Minus Query: 243 tggcctcgtcctcgtcgccttcttcg 268 ||||||||||| |||||||||||||| Sbjct: 172 tggcctcgtccacgtcgccttcttcg 147
>ref|NM_122647.2| Arabidopsis thaliana unknown protein AT5G27650 mRNA, complete cds Length = 3461 Score = 42.1 bits (21), Expect = 0.92 Identities = 33/37 (89%) Strand = Plus / Plus Query: 146 tggtctggggcaaggtgaagtctcatccgtggtggcc 182 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 631 tggtttggggaaaggtaaagtctcatccttggtggcc 667
>ref|XM_481492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 507 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cccgccgccgccggctccggcgccg 97 |||||||||||||| |||||||||| Sbjct: 383 cccgccgccgccggatccggcgccg 407
>ref|NM_187037.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1406 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 ccgccggctccggcgccgtcg 100 ||||||||||||||||||||| Sbjct: 958 ccgccggctccggcgccgtcg 938
>ref|XM_506302.1| PREDICTED Oryza sativa (japonica cultivar-group), P0030H06.108 mRNA Length = 1423 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 ccgccggctccggcgccgtcg 100 ||||||||||||||||||||| Sbjct: 972 ccgccggctccggcgccgtcg 952
>ref|XM_478588.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2356 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 gccgccgccggctccggcgccgtcg 100 |||||||||||| |||||||||||| Sbjct: 895 gccgccgccggcgccggcgccgtcg 919
>gb|AC163622.4| Mus musculus BAC clone RP24-566G6 from chromosome y, complete sequence Length = 166756 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 ctaaatctagggtttcgcttc 52 ||||||||||||||||||||| Sbjct: 114405 ctaaatctagggtttcgcttc 114425
>gb|AC140187.3| Mus musculus BAC clone RP24-364N20 from chromosome Y, complete sequence Length = 151358 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 ctaaatctagggtttcgcttc 52 ||||||||||||||||||||| Sbjct: 142266 ctaaatctagggtttcgcttc 142246
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 cgccatggcctcgtcctcgtc 258 ||||||||||||||||||||| Sbjct: 2319971 cgccatggcctcgtcctcgtc 2319991
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ccgccgccggctccggcgccg 97 ||||||||||||||||||||| Sbjct: 938766 ccgccgccggctccggcgccg 938786
>gb|AC151827.5| Mus musculus BAC clone RP24-453P17 from chromosome y, complete sequence Length = 166980 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 ctaaatctagggtttcgcttc 52 ||||||||||||||||||||| Sbjct: 17749 ctaaatctagggtttcgcttc 17769
>gb|AE006008.1| Caulobacter crescentus CB15 section 334 of 359 of the complete genome Length = 14619 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccccgccgccgccggctccgg 92 ||||||||||||||||||||| Sbjct: 271 ccccgccgccgccggctccgg 251
>gb|AE005964.1| Caulobacter crescentus CB15 section 290 of 359 of the complete genome Length = 10554 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 cgccgccggctccggcgccgt 98 ||||||||||||||||||||| Sbjct: 5906 cgccgccggctccggcgccgt 5926
>dbj|AK133222.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932418G15 product:zinc finger protein 2, Y linked, full insert sequence Length = 2817 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 ctaaatctagggtttcgcttc 52 ||||||||||||||||||||| Sbjct: 172 ctaaatctagggtttcgcttc 152
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 gccgccgccggctccggcgccgtcg 100 |||||||||||| |||||||||||| Sbjct: 21306967 gccgccgccggcgccggcgccgtcg 21306991 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 ccgccggctccggcgccgtcg 100 ||||||||||||||||||||| Sbjct: 15179253 ccgccggctccggcgccgtcg 15179233 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggctggccccgccgccgccg 85 |||||||||||||||||||| Sbjct: 14479883 ggctggccccgccgccgccg 14479864 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 73 cccgccgccgccggctccggcgccgtcg 100 ||||||||||||| ||||| |||||||| Sbjct: 5756504 cccgccgccgccgtctccgccgccgtcg 5756531
>gb|AC069018.17|AC069018 Mus musculus BAC MGS3-563C15 (Genome Systems Mouse BAC Library) complete sequence Length = 157665 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 ctaaatctagggtttcgcttc 52 ||||||||||||||||||||| Sbjct: 37160 ctaaatctagggtttcgcttc 37180
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 accgccatggcctcgtcctcg 256 ||||||||||||||||||||| Sbjct: 276301 accgccatggcctcgtcctcg 276281 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccggctccggcgccg 97 |||||||||||||||||||| Sbjct: 2236323 cgccgccggctccggcgccg 2236342
>gb|AC069556.4|AC069556 Genomic Sequence For Arabidopsis thaliana Clone T1G16 From Chromosome V, complete sequence Length = 93672 Score = 42.1 bits (21), Expect = 0.92 Identities = 33/37 (89%) Strand = Plus / Plus Query: 146 tggtctggggcaaggtgaagtctcatccgtggtggcc 182 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 6290 tggtttggggaaaggtaaagtctcatccttggtggcc 6326
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 cgccgccgccggctccggcgc 95 ||||||||||||||||||||| Sbjct: 4177055 cgccgccgccggctccggcgc 4177075
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcg 94 ||||||||||||||||||||| Sbjct: 141581 ccgccgccgccggctccggcg 141601
>dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0030H06 Length = 147890 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 ccgccggctccggcgccgtcg 100 ||||||||||||||||||||| Sbjct: 46002 ccgccggctccggcgccgtcg 45982
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 gccgccgccggctccggcgccgtcg 100 |||||||||||| |||||||||||| Sbjct: 27135 gccgccgccggcgccggcgccgtcg 27159
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458H05 Length = 136299 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 gccgccgccggctccggcgccgtcg 100 |||||||||||| |||||||||||| Sbjct: 93252 gccgccgccggcgccggcgccgtcg 93276
>dbj|AK107021.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A01, full insert sequence Length = 1128 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcg 94 ||||||||||||||||||||| Sbjct: 96 ccgccgccgccggctccggcg 116
>dbj|AK100722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116H24, full insert sequence Length = 2354 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 gccgccgccggctccggcgccgtcg 100 |||||||||||| |||||||||||| Sbjct: 895 gccgccgccggcgccggcgccgtcg 919
>dbj|AK099317.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144B01, full insert sequence Length = 1423 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 ccgccggctccggcgccgtcg 100 ||||||||||||||||||||| Sbjct: 972 ccgccggctccggcgccgtcg 952
>dbj|AK072251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004H21, full insert sequence Length = 1406 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 ccgccggctccggcgccgtcg 100 ||||||||||||||||||||| Sbjct: 958 ccgccggctccggcgccgtcg 938
>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM, complete sequence Length = 107931 Score = 42.1 bits (21), Expect = 0.92 Identities = 33/37 (89%) Strand = Plus / Plus Query: 146 tggtctggggcaaggtgaagtctcatccgtggtggcc 182 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 95324 tggtttggggaaaggtaaagtctcatccttggtggcc 95360
>ref|NM_009571.1| Mus musculus zinc finger protein 2, Y linked (Zfy2), mRNA Length = 2794 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 ctaaatctagggtttcgcttc 52 ||||||||||||||||||||| Sbjct: 132 ctaaatctagggtttcgcttc 112
>gb|U15737.1|MMZFYII1 Mus musculus Zfy2 gene, promoter and exon 1A Length = 505 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 ctaaatctagggtttcgcttc 52 ||||||||||||||||||||| Sbjct: 391 ctaaatctagggtttcgcttc 371
>gb|M24401.1|MUSZFY2A Mus musculus zinc finger protein (Zfy-2) mRNA, complete cds Length = 2794 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 ctaaatctagggtttcgcttc 52 ||||||||||||||||||||| Sbjct: 132 ctaaatctagggtttcgcttc 112
>ref|XM_509956.1| PREDICTED: Pan troglodytes similar to Glia maturation factor, beta (LOC452914), mRNA Length = 513 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cccgccgccgccggctccgg 92 |||||||||||||||||||| Sbjct: 177 cccgccgccgccggctccgg 158
>ref|NM_194782.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNAa0087H07.6), mRNA Length = 2187 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 231 cggctaccgccatggcctcgtcctcgtc 258 ||||| ||||||||||| |||||||||| Sbjct: 345 cggctgccgccatggccgcgtcctcgtc 372
>ref|XM_466171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1074 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccgtcgt 101 |||||||||||| ||||| ||||||||| Sbjct: 422 ccgccgccgccgcctccgccgccgtcgt 449
>ref|NM_197134.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0051D19.6), mRNA Length = 1762 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ctggccccgccgccgccggc 87 |||||||||||||||||||| Sbjct: 576 ctggccccgccgccgccggc 557
>ref|NM_190382.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1419 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tggctggccccgccgccgcc 84 |||||||||||||||||||| Sbjct: 395 tggctggccccgccgccgcc 376
>ref|NM_191403.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccggctccggcgccg 97 |||||||||||||||||||| Sbjct: 122 cgccgccggctccggcgccg 141
>ref|NM_192592.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 597 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gccgccgccggctccggcgccgtc 99 |||||||||||| ||||||||||| Sbjct: 137 gccgccgccggcgccggcgccgtc 160
>ref|XM_469220.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1470 Score = 40.1 bits (20), Expect = 3.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccgtcgtgccc 105 |||||||||||| | ||| ||||||||||||| Sbjct: 79 ccgccgccgccgccgccgccgccgtcgtgccc 48
>ref|XM_477796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 450 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggctggccccgccgccgccg 85 |||||||||||||||||||| Sbjct: 88 ggctggccccgccgccgccg 69
>ref|XM_477073.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 cccgccgccgccggctccggcgccgtcg 100 ||||||||||||| ||||| |||||||| Sbjct: 740 cccgccgccgccgtctccgccgccgtcg 713
>ref|NM_004933.2| Homo sapiens cadherin 15, M-cadherin (myotubule) (CDH15), mRNA Length = 2875 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gctggccccgccgccgccgg 86 |||||||||||||||||||| Sbjct: 1523 gctggccccgccgccgccgg 1542
>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16, complete sequence Length = 139615 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 100536 ccgccgccgccggcgccggcgccg 100559
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 19696 ccgccgccgccggcgccggcgccg 19719
>gb|AC146718.2| Oryza sativa chromosome 3 B1130H05 genomic sequence, complete sequence Length = 49565 Score = 40.1 bits (20), Expect = 3.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccgtcgtgccc 105 |||||||||||| | ||| ||||||||||||| Sbjct: 34677 ccgccgccgccgccgccgccgccgtcgtgccc 34646
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 ccggcgccgtcgtgcccgccggcg 112 ||||||||| |||||||||||||| Sbjct: 1631684 ccggcgccgccgtgcccgccggcg 1631707 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ccccgccgccgccggctccg 91 |||||||||||||||||||| Sbjct: 1385133 ccccgccgccgccggctccg 1385152
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 70 ggccccgccgccgccggctccggcgccg 97 ||||||||||||| |||||||| ||||| Sbjct: 2144886 ggccccgccgccgtcggctccgccgccg 2144913
>gb|AY425710.1| Triticum aestivum sucrose-phosphate synthase (SPS10) mRNA, partial cds Length = 641 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 183 ccgccgccgccggccccggcgccg 160
>gb|BC008951.2| Homo sapiens cadherin 15, M-cadherin (myotubule), mRNA (cDNA clone MGC:3599 IMAGE:3027886), complete cds Length = 2827 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gctggccccgccgccgccgg 86 |||||||||||||||||||| Sbjct: 1498 gctggccccgccgccgccgg 1517
>gb|AY518936.1| Toxoplasma gondii eukaryotic initiation factor-2 alpha kinase-A mRNA, complete cds Length = 15219 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccg 97 ||||| |||||||||||||||||| Sbjct: 10565 ccgcctccgccggctccggcgccg 10542
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccgtcgtgccc 105 |||||||||||| | ||| ||||||||||||| Sbjct: 26151149 ccgccgccgccgccgccgccgccgtcgtgccc 26151180
>gb|AC009113.8| Homo sapiens chromosome 16 clone RP11-46C24, complete sequence Length = 138740 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gctggccccgccgccgccgg 86 |||||||||||||||||||| Sbjct: 74713 gctggccccgccgccgccgg 74694
>ref|XM_845645.1| PREDICTED: Canis familiaris similar to eomesodermin, transcript variant 2 (LOC485636), mRNA Length = 2184 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 70 ggccccgccgccgccggctccggcgccg 97 |||||||||||||||| |||| |||||| Sbjct: 681 ggccccgccgccgccgcctcccgcgccg 654
>ref|XM_542755.2| PREDICTED: Canis familiaris similar to eomesodermin, transcript variant 1 (LOC485636), mRNA Length = 2818 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 70 ggccccgccgccgccggctccggcgccg 97 |||||||||||||||| |||| |||||| Sbjct: 693 ggccccgccgccgccgcctcccgcgccg 666
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ctggccccgccgccgccggc 87 |||||||||||||||||||| Sbjct: 43795 ctggccccgccgccgccggc 43776
>emb|CR725111.2|CNS0GMFX Tetraodon nigroviridis full-length cDNA Length = 1570 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggctggccccgccgccgccg 85 |||||||||||||||||||| Sbjct: 1412 ggctggccccgccgccgccg 1393
>emb|CR724549.2|CNS0GM0B Tetraodon nigroviridis full-length cDNA Length = 1572 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggctggccccgccgccgccg 85 |||||||||||||||||||| Sbjct: 1412 ggctggccccgccgccgccg 1393
>emb|CR694532.2|CNS0FYUO Tetraodon nigroviridis full-length cDNA Length = 1523 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggctggccccgccgccgccg 85 |||||||||||||||||||| Sbjct: 1392 ggctggccccgccgccgccg 1373
>emb|CR692481.2|CNS0FX9P Tetraodon nigroviridis full-length cDNA Length = 781 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 446 ccgccgccgccggcgccggcgccg 423
>emb|CR692201.2|CNS0FX1X Tetraodon nigroviridis full-length cDNA Length = 1520 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggctggccccgccgccgccg 85 |||||||||||||||||||| Sbjct: 1413 ggctggccccgccgccgccg 1394
>emb|CR667359.2|CNS0FDWL Tetraodon nigroviridis full-length cDNA Length = 1412 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggctggccccgccgccgccg 85 |||||||||||||||||||| Sbjct: 1282 ggctggccccgccgccgccg 1263
>gb|AY118108.1| Leptosphaeria maculans isocitrate lyase (icl1) and predicted protein genes; and ribose-phosphate pyrophosphokinase (prs5) gene, partial cds Length = 5841 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ccgccgccggctccggcgcc 96 |||||||||||||||||||| Sbjct: 3052 ccgccgccggctccggcgcc 3033
>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034K24, complete sequence Length = 142852 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 46501 ccgccgccgccggcgccggcgccg 46478
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ccccgccgccgccggctccg 91 |||||||||||||||||||| Sbjct: 2602 ccccgccgccgccggctccg 2621
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ccccgccgccgccggctccg 91 |||||||||||||||||||| Sbjct: 72289 ccccgccgccgccggctccg 72308
>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence, complete sequence Length = 139187 Score = 40.1 bits (20), Expect = 3.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccgtcgtgccc 105 |||||||||||| | ||| ||||||||||||| Sbjct: 5401 ccgccgccgccgccgccgccgccgtcgtgccc 5370
>dbj|AB207101.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds, strain: K1 Length = 45779 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 23454 ccgccgccgccggcgccggcgccg 23477
>dbj|AB097474.1| Oryza sativa (japonica cultivar-group) transposon AnacB13 DNA, complete sequence Length = 1348 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 gccgccggctccggcgccgtcgtg 102 ||||||||| |||||||||||||| Sbjct: 485 gccgccggcgccggcgccgtcgtg 462
>gb|AC099733.2| Oryza sativa chromosome 10 clone OSJNAa0087H07, complete sequence Length = 132268 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 cggctaccgccatggcctcgtcctcgtc 258 ||||| ||||||||||| |||||||||| Sbjct: 62170 cggctgccgccatggccgcgtcctcgtc 62143
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 gccgccggctccggcgccgtcgtg 102 ||||||||| |||||||||||||| Sbjct: 36271 gccgccggcgccggcgccgtcgtg 36248
>gb|AC018478.4| Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone BACH57F14, complete sequence Length = 103809 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccatggcctcgtcctcgt 257 |||||||||||||||||||| Sbjct: 72166 cgccatggcctcgtcctcgt 72185
>gb|AC010668.7| Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone BACR44L03, complete sequence Length = 172190 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccatggcctcgtcctcgt 257 |||||||||||||||||||| Sbjct: 11956 cgccatggcctcgtcctcgt 11975
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 gcctcgtcctcgtcgccttcttcg 268 ||||| |||||||||||||||||| Sbjct: 2710437 gcctcttcctcgtcgccttcttcg 2710460
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gccatggcctcgtcctcgtc 258 |||||||||||||||||||| Sbjct: 26359144 gccatggcctcgtcctcgtc 26359125 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 25873853 ccgccgccgccggcgccggcgccg 25873876 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 cgccgccggctccggcgccgtcgt 101 |||||||||| ||||||||||||| Sbjct: 22170559 cgccgccggcgccggcgccgtcgt 22170582
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 ctggccccgccgccgccggc 87 |||||||||||||||||||| Sbjct: 18169333 ctggccccgccgccgccggc 18169352 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 gccgccggctccggcgccgtcgtg 102 ||||||||| |||||||||||||| Sbjct: 17895770 gccgccggcgccggcgccgtcgtg 17895793 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 cggctaccgccatggcctcgtcctcgtc 258 ||||| ||||||||||| |||||||||| Sbjct: 2333170 cggctgccgccatggccgcgtcctcgtc 2333143
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccgtcgtgccc 105 |||||||||||| | ||| ||||||||||||| Sbjct: 26242458 ccgccgccgccgccgccgccgccgtcgtgccc 26242489
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccgtcgt 101 |||||||||||| ||||| ||||||||| Sbjct: 20843545 ccgccgccgccgcctccgccgccgtcgt 20843518
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tggctggccccgccgccgcc 84 |||||||||||||||||||| Sbjct: 35162253 tggctggccccgccgccgcc 35162272 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccggctccggcgccg 97 |||||||||||||||||||| Sbjct: 32433550 cgccgccggctccggcgccg 32433569 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gccgccgccggctccggcgccgtc 99 |||||||||||| ||||||||||| Sbjct: 23164333 gccgccgccggcgccggcgccgtc 23164356
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tggctggccccgccgccgcc 84 |||||||||||||||||||| Sbjct: 41337 tggctggccccgccgccgcc 41356
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cgccggctccggcgccgtcg 100 |||||||||||||||||||| Sbjct: 3272324 cgccggctccggcgccgtcg 3272305
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccggctccggcgccg 97 |||||||||||||||||||| Sbjct: 21071 cgccgccggctccggcgccg 21090
>dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0673E01 Length = 125909 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggctggccccgccgccgccg 85 |||||||||||||||||||| Sbjct: 100214 ggctggccccgccgccgccg 100195
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 73 cccgccgccgccggctccggcgccgtcg 100 ||||||||||||| ||||| |||||||| Sbjct: 63532 cccgccgccgccgtctccgccgccgtcg 63559
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 ctcatccgtggtggccgggccacg 190 ||||||||||| |||||||||||| Sbjct: 339751 ctcatccgtgggggccgggccacg 339728
>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1143G03 Length = 137770 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccggctccggcgccg 97 |||||||||||||||||||| Sbjct: 113047 cgccgccggctccggcgccg 113066
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0551A03 Length = 173027 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 gccatggcctcgtcctcgtcgcct 262 ||||||||| |||||||||||||| Sbjct: 11493 gccatggccacgtcctcgtcgcct 11516
>dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B21 Length = 143722 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 gccatggcctcgtcctcgtcgcct 262 ||||||||| |||||||||||||| Sbjct: 128904 gccatggccacgtcctcgtcgcct 128927
>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710A02 Length = 157201 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gccgccgccggctccggcgccgtc 99 |||||||||||| ||||||||||| Sbjct: 96492 gccgccgccggcgccggcgccgtc 96515
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggc 93 |||||||||||||||||||| Sbjct: 22268 ccgccgccgccggctccggc 22249
>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1065_E04 Length = 115865 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggc 93 |||||||||||||||||||| Sbjct: 110921 ccgccgccgccggctccggc 110902
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1506_A04 Length = 114998 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||| ||||||||||||||| Sbjct: 58892 ccgccgccaccggctccggcgccg 58915
>dbj|BS000237.1| Pan troglodytes chromosome 22 clone:PTB-044B23, map 22, complete sequences Length = 144611 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ggccacgtctacagcctcac 203 |||||||||||||||||||| Sbjct: 14932 ggccacgtctacagcctcac 14951
>dbj|BS000236.1| Pan troglodytes chromosome 22 clone:PTB-058L13, map 22, complete sequences Length = 160456 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ggccacgtctacagcctcac 203 |||||||||||||||||||| Sbjct: 154560 ggccacgtctacagcctcac 154579
>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_H01 Length = 121377 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccgtcgt 101 |||||||||||| ||||| ||||||||| Sbjct: 86006 ccgccgccgccgcctccgccgccgtcgt 85979
>dbj|AK120965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040E06, full insert sequence Length = 2486 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 1759 ccgccgccgccggcgccggcgccg 1782
>dbj|AK111253.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-E03, full insert sequence Length = 684 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 gccgccgccggctccggcgccgtc 99 |||||||||||| ||||||||||| Sbjct: 257 gccgccgccggcgccggcgccgtc 234
>dbj|AK109476.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C03, full insert sequence Length = 2019 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ctggccccgccgccgccggc 87 |||||||||||||||||||| Sbjct: 486 ctggccccgccgccgccggc 467
>dbj|AK101993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079H04, full insert sequence Length = 1218 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggc 93 |||||||||||||||||||| Sbjct: 111 ccgccgccgccggctccggc 92
>emb|AL359792.3|CNS05TF1 Human chromosome 14 DNA sequence BAC R-794A8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180353 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cccgccgccgccggctccgg 92 |||||||||||||||||||| Sbjct: 111597 cccgccgccgccggctccgg 111578
>dbj|AK067865.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124K14, full insert sequence Length = 2169 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 cgccgccggctccggcgccgtcgt 101 |||||||||| ||||||||||||| Sbjct: 86 cgccgccggcgccggcgccgtcgt 63
>dbj|AK067126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096O03, full insert sequence Length = 1817 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 cgccgccggctccggcgccgtcgt 101 |||||||||| ||||||||||||| Sbjct: 85 cgccgccggcgccggcgccgtcgt 62
>dbj|AK064237.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A08, full insert sequence Length = 1529 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tggctggccccgccgccgcc 84 |||||||||||||||||||| Sbjct: 136 tggctggccccgccgccgcc 117
>gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete sequence Length = 77605 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 39186 ccgccgccgccggcgccggcgccg 39163
>gb|AE003843.5| Drosophila melanogaster chromosome 4, section 3 of 5 of the complete sequence Length = 328561 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccatggcctcgtcctcgt 257 |||||||||||||||||||| Sbjct: 58285 cgccatggcctcgtcctcgt 58304
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 2533083 ccgccgccgccggcgccggcgccg 2533060
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 ctggccccgccgccgccggc 87 |||||||||||||||||||| Sbjct: 18178586 ctggccccgccgccgccggc 18178605 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 gccgccggctccggcgccgtcgtg 102 ||||||||| |||||||||||||| Sbjct: 17905023 gccgccggcgccggcgccgtcgtg 17905046 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 cggctaccgccatggcctcgtcctcgtc 258 ||||| ||||||||||| |||||||||| Sbjct: 2333121 cggctgccgccatggccgcgtcctcgtc 2333094
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gccatggcctcgtcctcgtc 258 |||||||||||||||||||| Sbjct: 26287314 gccatggcctcgtcctcgtc 26287295 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 25802029 ccgccgccgccggcgccggcgccg 25802052 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 cgccgccggctccggcgccgtcgt 101 |||||||||| ||||||||||||| Sbjct: 22098904 cgccgccggcgccggcgccgtcgt 22098927
>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155585 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 cgccgccggctccggcgccgtcgt 101 |||||||||| ||||||||||||| Sbjct: 82451 cgccgccggcgccggcgccgtcgt 82428
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gccatggcctcgtcctcgtc 258 |||||||||||||||||||| Sbjct: 123128 gccatggcctcgtcctcgtc 123109
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gccatggcctcgtcctcgtc 258 |||||||||||||||||||| Sbjct: 73418 gccatggcctcgtcctcgtc 73399
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||||||||||| ||||||||| Sbjct: 95304 ccgccgccgccggcgccggcgccg 95327
>dbj|AP004959.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT21I12, TM0136, complete sequence Length = 81332 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgccgccggctccggcgccg 97 |||||| ||||||||||||||||| Sbjct: 61402 ccgccggcgccggctccggcgccg 61425
>dbj|AP000355.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1896H10 Length = 173785 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gctggccccgccgccgccgg 86 |||||||||||||||||||| Sbjct: 57348 gctggccccgccgccgccgg 57367
>dbj|D83542.1|HUMC15A Homo sapiens mRNA for cadherin-15, complete cds Length = 2833 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gctggccccgccgccgccgg 86 |||||||||||||||||||| Sbjct: 1523 gctggccccgccgccgccgg 1542 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,044,498 Number of Sequences: 3902068 Number of extensions: 2044498 Number of successful extensions: 64800 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 60658 Number of HSP's gapped (non-prelim): 4128 length of query: 278 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 256 effective length of database: 17,147,199,772 effective search space: 4389683141632 effective search space used: 4389683141632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
