>gb|DQ091784.1| Oncorhynchus mykiss MHC class I alpha 1 antigen (Onmy-UHA) gene,
           Onmy-UHA*0102 allele, exon 2 and partial cds
          Length = 236

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 acatggccactgcaagagat 280
           ||||||||||||||||||||
Sbjct: 203 acatggccactgcaagagat 222

>gb|DQ091783.1| Oncorhynchus mykiss MHC class I alpha 1 antigen (Onmy-UHA) gene,
           Onmy-UHA*0101 allele, exon 2 and partial cds
          Length = 236

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 acatggccactgcaagagat 280
           ||||||||||||||||||||
Sbjct: 203 acatggccactgcaagagat 222

>gb|DQ091782.1| Oncorhynchus mykiss MHC class I alpha 1 antigen (Onmy-UHA) gene,
           Onmy-UHA*0103 allele, exon 2 and partial cds
          Length = 236

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 acatggccactgcaagagat 280
           ||||||||||||||||||||
Sbjct: 203 acatggccactgcaagagat 222


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,572,357
Number of Sequences: 3902068
Number of extensions: 1572357
Number of successful extensions: 20550
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20547
Number of HSP's gapped (non-prelim): 3
length of query: 363
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 341
effective length of database: 17,147,199,772
effective search space: 5847195122252
effective search space used: 5847195122252
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)