ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl25a01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030E22, complete sequence Length = 135468 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 163 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 222 ||||||||||||||||| || ||||||||| | |||||| |||||||||| ||||||| Sbjct: 122601 aagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccgcgacgacatc 122660 Query: 223 cagtacatcaacgacgagctctgcagcatgcaggccttcctca 265 ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 122661 cagtacatcaacgacgagctcgccagcatgcaggccttcctca 122703 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 143 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 202 |||||||||| || || | ||||||||||| |||||| || ||||||||| | || ||| Sbjct: 112263 ccgtgaagtcgctcgtcaacaagctgggcaccctcctggcgcaggagtacaccctcatct 112322 Query: 203 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 262 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 112323 ccggcgtccgcgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 112382 Query: 263 tca 265 ||| Sbjct: 112383 tca 112385 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 143 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 202 |||||||||| || || | |||||||||||||||||| || ||||||||| | || ||| Sbjct: 16502 ccgtgaagtccctcgtcaacaagctgggcagcctcctcgcgcaggagtacaccctcatct 16443 Query: 203 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 262 ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 16442 ccggcgtccacgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 16383 Query: 263 tca 265 ||| Sbjct: 16382 tca 16380 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 163 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 222 ||||| ||||||||||| |||||||||||| | || ||| | ||||| ||| |||| ||| Sbjct: 81610 aagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcgagatc 81551 Query: 223 cagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaacctcggc 276 ||||||||||| |||||||| ||||||||| ||||||||| |||||||||| Sbjct: 81550 cagtacatcaaggacgagctggccagcatgcacgccttcctcctcaacctcggc 81497
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 163 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 222 ||||||||||||||||| || ||||||||| | |||||| |||||||||| ||||||| Sbjct: 22565456 aagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccgcgacgacatc 22565515 Query: 223 cagtacatcaacgacgagctctgcagcatgcaggccttcctca 265 ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 22565516 cagtacatcaacgacgagctcgccagcatgcaggccttcctca 22565558 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 143 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 202 |||||||||| || || | ||||||||||| |||||| || ||||||||| | || ||| Sbjct: 22555118 ccgtgaagtcgctcgtcaacaagctgggcaccctcctggcgcaggagtacaccctcatct 22555177 Query: 203 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 262 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 22555178 ccggcgtccgcgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 22555237 Query: 263 tca 265 ||| Sbjct: 22555238 tca 22555240 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 143 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 202 |||||||||| || || | |||||||||||||||||| || ||||||||| | || ||| Sbjct: 22459357 ccgtgaagtccctcgtcaacaagctgggcagcctcctcgcgcaggagtacaccctcatct 22459298 Query: 203 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 262 ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 22459297 ccggcgtccacgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 22459238 Query: 263 tca 265 ||| Sbjct: 22459237 tca 22459235 Score = 95.6 bits (48), Expect = 9e-17 Identities = 90/104 (86%) Strand = Plus / Plus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 |||||||||||| ||| || ||||||||||| ||||| || | |||||||| || |||| Sbjct: 27109028 gcaagctgggcaaccttcttgcccaggagtattctctggtcagcggcgtccgtggtgaca 27109087 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcctc 264 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 27109088 tccagtacatcaatgacgagcttgccagcatgcaggccttcctc 27109131 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 163 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 222 ||||| ||||||||||| |||||||||||| | || ||| | ||||| ||| |||| ||| Sbjct: 22524465 aagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcgagatc 22524406 Query: 223 cagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaacctcggc 276 ||||||||||| |||||||| ||||||||| ||||||||| |||||||||| Sbjct: 22524405 cagtacatcaaggacgagctggccagcatgcacgccttcctcctcaacctcggc 22524352 Score = 89.7 bits (45), Expect = 5e-15 Identities = 93/109 (85%) Strand = Plus / Plus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 ||||| |||| | |||||| |||||||||||||| || ||| | || ||||||||||||| Sbjct: 16218488 gcaagttgggaaacctcctcgcccaggagtacgcgctcatcaggggtgtccgcggcgaca 16218547 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaa 269 |||||||||||| ||||||| | |||||| || |||||||||||||| Sbjct: 16218548 tccagtacatcagcgacgagatggccagcatccacgccttcctcaccaa 16218596 Score = 75.8 bits (38), Expect = 8e-11 Identities = 101/122 (82%) Strand = Plus / Plus Query: 121 gtggtgggagcttcgcaatccaccgtgaagtctctggtgagcaagctgggcagcctccta 180 |||||||| |||||| | ||||| ||| ||||||| ||| |||||| || || | || Sbjct: 27017965 gtggtgggtgcttcggaggccaccatgaggtctctgctgaccaagctcgggggcttactc 27018024 Query: 181 gcccaggagtacgctctgatccgtggcgtccgcggcgacatccagtacatcaacgacgag 240 |||| ||||||||||| |||||||||||||| || ||||||||||||||| ||||||| Sbjct: 27018025 tcccaagagtacgctctcatccgtggcgtccggggagacatccagtacatccgcgacgag 27018084 Query: 241 ct 242 || Sbjct: 27018085 ct 27018086 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 ggcgccggcgacgaggagcacgacg 298 |||||||||||||||||| |||||| Sbjct: 23339018 ggcgccggcgacgaggaggacgacg 23338994 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gcatgcaggccttcctcacc 267 |||||||||||||||||||| Sbjct: 7116200 gcatgcaggccttcctcacc 7116181
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 163 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 222 ||||||||||||||||| || ||||||||| | |||||| |||||||||| ||||||| Sbjct: 22875367 aagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccgcgacgacatc 22875426 Query: 223 cagtacatcaacgacgagctctgcagcatgcaggccttcctca 265 ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 22875427 cagtacatcaacgacgagctcgccagcatgcaggccttcctca 22875469 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 143 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 202 |||||||||| || || | ||||||||||| |||||| || ||||||||| | || ||| Sbjct: 22865029 ccgtgaagtcgctcgtcaacaagctgggcaccctcctggcgcaggagtacaccctcatct 22865088 Query: 203 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 262 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 22865089 ccggcgtccgcgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 22865148 Query: 263 tca 265 ||| Sbjct: 22865149 tca 22865151 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 143 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 202 |||||||||| || || | |||||||||||||||||| || ||||||||| | || ||| Sbjct: 22769268 ccgtgaagtccctcgtcaacaagctgggcagcctcctcgcgcaggagtacaccctcatct 22769209 Query: 203 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 262 ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 22769208 ccggcgtccacgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 22769149 Query: 263 tca 265 ||| Sbjct: 22769148 tca 22769146 Score = 95.6 bits (48), Expect = 9e-17 Identities = 90/104 (86%) Strand = Plus / Plus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 |||||||||||| ||| || ||||||||||| ||||| || | |||||||| || |||| Sbjct: 27436081 gcaagctgggcaaccttcttgcccaggagtattctctggtcagcggcgtccgtggtgaca 27436140 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcctc 264 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 27436141 tccagtacatcaatgacgagcttgccagcatgcaggccttcctc 27436184 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 163 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 222 ||||| ||||||||||| |||||||||||| | || ||| | ||||| ||| |||| ||| Sbjct: 22834376 aagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcgagatc 22834317 Query: 223 cagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaacctcggc 276 ||||||||||| |||||||| ||||||||| ||||||||| |||||||||| Sbjct: 22834316 cagtacatcaaggacgagctggccagcatgcacgccttcctcctcaacctcggc 22834263 Score = 89.7 bits (45), Expect = 5e-15 Identities = 93/109 (85%) Strand = Plus / Plus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 ||||| |||| | |||||| |||||||||||||| || ||| | || ||||||||||||| Sbjct: 16308470 gcaagttgggaaacctcctcgcccaggagtacgcgctcatcaggggtgtccgcggcgaca 16308529 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaa 269 |||||||||||| ||||||| | |||||| || |||||||||||||| Sbjct: 16308530 tccagtacatcagcgacgagatggccagcatccacgccttcctcaccaa 16308578 Score = 75.8 bits (38), Expect = 8e-11 Identities = 101/122 (82%) Strand = Plus / Plus Query: 121 gtggtgggagcttcgcaatccaccgtgaagtctctggtgagcaagctgggcagcctccta 180 |||||||| |||||| | ||||| ||| ||||||| ||| |||||| || || | || Sbjct: 27345018 gtggtgggtgcttcggaggccaccatgaggtctctgctgaccaagctcgggggcttactc 27345077 Query: 181 gcccaggagtacgctctgatccgtggcgtccgcggcgacatccagtacatcaacgacgag 240 |||| ||||||||||| |||||||||||||| || ||||||||||||||| ||||||| Sbjct: 27345078 tcccaagagtacgctctcatccgtggcgtccggggagacatccagtacatccgcgacgag 27345137 Query: 241 ct 242 || Sbjct: 27345138 ct 27345139 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 ggcgccggcgacgaggagcacgacg 298 |||||||||||||||||| |||||| Sbjct: 23648928 ggcgccggcgacgaggaggacgacg 23648904 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gcatgcaggccttcctcacc 267 |||||||||||||||||||| Sbjct: 7182171 gcatgcaggccttcctcacc 7182152
>dbj|AK065351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020O22, full insert sequence Length = 3275 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 143 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 202 |||||||||| || || | ||||||||||| |||||| || ||||||||| | || ||| Sbjct: 94 ccgtgaagtcgctcgtcaacaagctgggcaccctcctggcgcaggagtacaccctcatct 153 Query: 203 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 262 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 154 ccggcgtccgcgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 213 Query: 263 tca 265 ||| Sbjct: 214 tca 216
>gb|AC145395.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0047M04, complete sequence Length = 109523 Score = 95.6 bits (48), Expect = 9e-17 Identities = 90/104 (86%) Strand = Plus / Plus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 |||||||||||| ||| || ||||||||||| ||||| || | |||||||| || |||| Sbjct: 60081 gcaagctgggcaaccttcttgcccaggagtattctctggtcagcggcgtccgtggtgaca 60140 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcctc 264 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 60141 tccagtacatcaatgacgagcttgccagcatgcaggccttcctc 60184
>dbj|AK108692.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D06, full insert sequence Length = 2265 Score = 95.6 bits (48), Expect = 9e-17 Identities = 90/104 (86%) Strand = Plus / Plus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 |||||||||||| ||| || ||||||||||| ||||| || | |||||||| || |||| Sbjct: 70 gcaagctgggcaaccttcttgcccaggagtattctctggtcagcggcgtccgtggtgaca 129 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcctc 264 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 130 tccagtacatcaatgacgagcttgccagcatgcaggccttcctc 173
>dbj|AK073759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065D18, full insert sequence Length = 3778 Score = 95.6 bits (48), Expect = 9e-17 Identities = 90/104 (86%) Strand = Plus / Plus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 |||||||||||| ||| || ||||||||||| ||||| || | |||||||| || |||| Sbjct: 439 gcaagctgggcaaccttcttgcccaggagtattctctggtcagcggcgtccgtggtgaca 498 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcctc 264 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 499 tccagtacatcaatgacgagcttgccagcatgcaggccttcctc 542
>ref|NM_194733.1| Oryza sativa (japonica cultivar-group) putative disease resistance protein (OSJNBb0004A06.5), mRNA Length = 1023 Score = 93.7 bits (47), Expect = 3e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 |||||||||||| ||| || ||||||||||| | ||||||| | |||||||| || |||| Sbjct: 50 gcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtgaca 109 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcct 263 |||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 110 tccagtacatcagtgacgagctcgccagcatgaaggccttcct 152
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 93.7 bits (47), Expect = 3e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 |||||||||||| ||| || ||||||||||| | ||||||| | |||||||| || |||| Sbjct: 1934627 gcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtgaca 1934568 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcct 263 |||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 1934567 tccagtacatcagtgacgagctcgccagcatgaaggccttcct 1934525
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 93.7 bits (47), Expect = 3e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 |||||||||||| ||| || ||||||||||| | ||||||| | |||||||| || |||| Sbjct: 25356 gcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtgaca 25297 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcct 263 |||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 25296 tccagtacatcagtgacgagctcgccagcatgaaggccttcct 25254
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 93.7 bits (47), Expect = 3e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 |||||||||||| ||| || ||||||||||| | ||||||| | |||||||| || |||| Sbjct: 1934627 gcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtgaca 1934568 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcct 263 |||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 1934567 tccagtacatcagtgacgagctcgccagcatgaaggccttcct 1934525
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 93.7 bits (47), Expect = 3e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 |||||||||||| ||| || ||||||||||| | ||||||| | |||||||| || |||| Sbjct: 1934578 gcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtgaca 1934519 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcct 263 |||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 1934518 tccagtacatcagtgacgagctcgccagcatgaaggccttcct 1934476
>dbj|AK119331.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-B07, full insert sequence Length = 3124 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 163 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 222 ||||| ||||||||||| |||||||||||| | || ||| | ||||| ||| |||| ||| Sbjct: 161 aagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcgagatc 220 Query: 223 cagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaacctcggc 276 ||||||||||| |||||||| ||||||||| ||||||||| |||||||||| Sbjct: 221 cagtacatcaaggacgagctggccagcatgcacgccttcctcctcaacctcggc 274
>gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079H11, complete sequence Length = 143925 Score = 89.7 bits (45), Expect = 5e-15 Identities = 93/109 (85%) Strand = Plus / Plus Query: 161 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 220 ||||| |||| | |||||| |||||||||||||| || ||| | || ||||||||||||| Sbjct: 83699 gcaagttgggaaacctcctcgcccaggagtacgcgctcatcaggggtgtccgcggcgaca 83758 Query: 221 tccagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaa 269 |||||||||||| ||||||| | |||||| || |||||||||||||| Sbjct: 83759 tccagtacatcagcgacgagatggccagcatccacgccttcctcaccaa 83807
>gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0049B20, complete sequence Length = 131337 Score = 75.8 bits (38), Expect = 8e-11 Identities = 101/122 (82%) Strand = Plus / Plus Query: 121 gtggtgggagcttcgcaatccaccgtgaagtctctggtgagcaagctgggcagcctccta 180 |||||||| |||||| | ||||| ||| ||||||| ||| |||||| || || | || Sbjct: 71253 gtggtgggtgcttcggaggccaccatgaggtctctgctgaccaagctcgggggcttactc 71312 Query: 181 gcccaggagtacgctctgatccgtggcgtccgcggcgacatccagtacatcaacgacgag 240 |||| ||||||||||| |||||||||||||| || ||||||||||||||| ||||||| Sbjct: 71313 tcccaagagtacgctctcatccgtggcgtccggggagacatccagtacatccgcgacgag 71372 Query: 241 ct 242 || Sbjct: 71373 ct 71374
>dbj|AK103659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135H03, full insert sequence Length = 2323 Score = 75.8 bits (38), Expect = 8e-11 Identities = 101/122 (82%) Strand = Plus / Plus Query: 121 gtggtgggagcttcgcaatccaccgtgaagtctctggtgagcaagctgggcagcctccta 180 |||||||| |||||| | ||||| ||| ||||||| ||| |||||| || || | || Sbjct: 336 gtggtgggtgcttcggaggccaccatgaggtctctgctgaccaagctcgggggcttactc 395 Query: 181 gcccaggagtacgctctgatccgtggcgtccgcggcgacatccagtacatcaacgacgag 240 |||| ||||||||||| |||||||||||||| || ||||||||||||||| ||||||| Sbjct: 396 tcccaagagtacgctctcatccgtggcgtccggggagacatccagtacatccgcgacgag 455 Query: 241 ct 242 || Sbjct: 456 ct 457
>gb|AF151964.1|AF151964 Pseudomonas putida strain KT2440 proline permease (putP) gene, complete cds Length = 3859 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 153 tctggtgagcaagctgggcagcc 175 ||||||||||||||||||||||| Sbjct: 1753 tctggtgagcaagctgggcagcc 1775
>gb|AF153207.1|AF153207 Pseudomonas putida proline dehydrogenase (putA) and proline permease (putP) genes, complete cds Length = 8660 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 153 tctggtgagcaagctgggcagcc 175 ||||||||||||||||||||||| Sbjct: 6554 tctggtgagcaagctgggcagcc 6576
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 153 tctggtgagcaagctgggcagcc 175 ||||||||||||||||||||||| Sbjct: 5628716 tctggtgagcaagctgggcagcc 5628694
>ref|XM_550383.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1365 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 cgccggcgacgaggagcacgacgcc 300 |||||||||||||||| |||||||| Sbjct: 64 cgccggcgacgaggaggacgacgcc 40
>ref|XM_470023.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1395 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 gcgccggcgacgaggagcacg 295 ||||||||||||||||||||| Sbjct: 56 gcgccggcgacgaggagcacg 36
>gb|AC102101.7| Mus musculus chromosome 15, clone RP23-74N15, complete sequence Length = 191261 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cagcctcctagcccaggagta 191 ||||||||||||||||||||| Sbjct: 20725 cagcctcctagcccaggagta 20705
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 gcgccggcgacgaggagcacg 295 ||||||||||||||||||||| Sbjct: 33389321 gcgccggcgacgaggagcacg 33389301 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tcaaactcgaaaatggatct 119 |||||||||||||||||||| Sbjct: 16759852 tcaaactcgaaaatggatct 16759833 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tctctggtgagcaagctggg 170 |||||||||||||||||||| Sbjct: 2773502 tctctggtgagcaagctggg 2773483
>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034K24, complete sequence Length = 142852 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 274 ggcgccggcgacgaggagcacgacg 298 |||||||||||||||||| |||||| Sbjct: 47957 ggcgccggcgacgaggaggacgacg 47981
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 aacctcggcgccggcgacgag 288 ||||||||||||||||||||| Sbjct: 2751007 aacctcggcgccggcgacgag 2751027
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 gcgccggcgacgaggagcacg 295 ||||||||||||||||||||| Sbjct: 108790 gcgccggcgacgaggagcacg 108810
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 gcgccggcgacgaggagcacg 295 ||||||||||||||||||||| Sbjct: 33479831 gcgccggcgacgaggagcacg 33479811 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tcaaactcgaaaatggatct 119 |||||||||||||||||||| Sbjct: 16753485 tcaaactcgaaaatggatct 16753466 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tctctggtgagcaagctggg 170 |||||||||||||||||||| Sbjct: 2773612 tctctggtgagcaagctggg 2773593
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 cgccggcgacgaggagcacgacgcc 300 |||||||||||||||| |||||||| Sbjct: 4080379 cgccggcgacgaggaggacgacgcc 4080355
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 cgccggcgacgaggagcacgacgcc 300 |||||||||||||||| |||||||| Sbjct: 47122 cgccggcgacgaggaggacgacgcc 47098
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 cgccggcgacgaggagcacgacgcc 300 |||||||||||||||| |||||||| Sbjct: 27350 cgccggcgacgaggaggacgacgcc 27326
>dbj|AK120965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040E06, full insert sequence Length = 2486 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 ggcgccggcgacgaggagcacgacg 298 |||||||||||||||||| |||||| Sbjct: 917 ggcgccggcgacgaggaggacgacg 893
>dbj|AK100198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N20, full insert sequence Length = 1464 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 gcgccggcgacgaggagcacg 295 ||||||||||||||||||||| Sbjct: 71 gcgccggcgacgaggagcacg 51
>dbj|AK073308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024I21, full insert sequence Length = 1198 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 gcgccggcgacgaggagcacg 295 ||||||||||||||||||||| Sbjct: 76 gcgccggcgacgaggagcacg 56
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 tggtgagcaagctgggcagcc 175 ||||||||||||||||||||| Sbjct: 5304752 tggtgagcaagctgggcagcc 5304732
>gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete sequence Length = 77605 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 274 ggcgccggcgacgaggagcacgacg 298 |||||||||||||||||| |||||| Sbjct: 40646 ggcgccggcgacgaggaggacgacg 40670
>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete sequence Length = 70311 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 274 ggcgccggcgacgaggagcacgacg 298 |||||||||||||||||| |||||| Sbjct: 26950 ggcgccggcgacgaggaggacgacg 26974
>gb|AC158921.17| Mus musculus chromosome 15, clone RP23-120K5, complete sequence Length = 218949 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cagcctcctagcccaggagta 191 ||||||||||||||||||||| Sbjct: 218304 cagcctcctagcccaggagta 218284
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aatccaccgtgaagtctctg 156 |||||||||||||||||||| Sbjct: 1033094 aatccaccgtgaagtctctg 1033113
>ref|XM_475385.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 243 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ggcgccggcgacgaggagca 293 |||||||||||||||||||| Sbjct: 141 ggcgccggcgacgaggagca 160
>ref|XM_478383.1| Oryza sativa (japonica cultivar-group), mRNA Length = 567 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 cctcggcgccggcgacgaggagca 293 |||| ||||||||||||||||||| Sbjct: 19 cctccgcgccggcgacgaggagca 42
>ref|NM_186249.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3393 Score = 40.1 bits (20), Expect = 4.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 205 ggcgtccgcggcgacatccagtacatcaacgacgag 240 ||||||||||||||| | |||| |||||| |||||| Sbjct: 97 ggcgtccgcggcgacgtgcagttcatcaaggacgag 132
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gcatgcaggccttcctcacc 267 |||||||||||||||||||| Sbjct: 66355 gcatgcaggccttcctcacc 66374
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gcatgcaggccttcctcacc 267 |||||||||||||||||||| Sbjct: 29420 gcatgcaggccttcctcacc 29401
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ggcgccggcgacgaggagca 293 |||||||||||||||||||| Sbjct: 38633 ggcgccggcgacgaggagca 38652
>gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosome 18, complete sequence Length = 173054 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 agctgggcagcctcctagcc 183 |||||||||||||||||||| Sbjct: 143398 agctgggcagcctcctagcc 143417
>gb|AY257538.1| Pseudomonas aeruginosa strain C plasmid pKLC102, complete sequence Length = 103532 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 accaacctcggcgccggcgacgag 288 ||||||||||||||||||| |||| Sbjct: 14617 accaacctcggcgccggcggcgag 14640
>gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome 18, complete sequence Length = 186726 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 agctgggcagcctcctagcc 183 |||||||||||||||||||| Sbjct: 137206 agctgggcagcctcctagcc 137187
>gb|AC123550.5| Mus musculus BAC clone RP24-289C13 from chromosome 7, complete sequence Length = 169206 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 tctcagcactaatttctgggcaca 43 ||||| |||||||||||||||||| Sbjct: 114235 tctcaccactaatttctgggcaca 114212
>gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 genomic sequence, complete sequence Length = 129167 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tcaaactcgaaaatggatct 119 |||||||||||||||||||| Sbjct: 110645 tcaaactcgaaaatggatct 110626
>emb|AL589923.11| Human DNA sequence from clone RP11-374O2 on chromosome 9 Contains part of a novel gene, complete sequence Length = 104685 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tggatctggtggtgggagct 132 |||||||||||||||||||| Sbjct: 39659 tggatctggtggtgggagct 39640
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 cggcgccggcgacgaggagc 292 |||||||||||||||||||| Sbjct: 2122688 cggcgccggcgacgaggagc 2122707
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aatccaccgtgaagtctctg 156 |||||||||||||||||||| Sbjct: 1043905 aatccaccgtgaagtctctg 1043924
>gb|DQ372923.1| Bacteriophage mu1/6, complete genome Length = 38194 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ctcggcgccggcgacgagga 290 |||||||||||||||||||| Sbjct: 25929 ctcggcgccggcgacgagga 25910
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aatccaccgtgaagtctctg 156 |||||||||||||||||||| Sbjct: 1045104 aatccaccgtgaagtctctg 1045123
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 cctcggcgccggcgacgagg 289 |||||||||||||||||||| Sbjct: 2264681 cctcggcgccggcgacgagg 2264700 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cggcgacgaggagcacgacg 298 |||||||||||||||||||| Sbjct: 1696289 cggcgacgaggagcacgacg 1696308
>gb|AC154108.3| Mus musculus BAC clone RP23-74K24 from chromosome 7, complete sequence Length = 222515 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 tctcagcactaatttctgggcaca 43 ||||| |||||||||||||||||| Sbjct: 158755 tctcaccactaatttctgggcaca 158778
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 cctcggcgccggcgacgaggagca 293 |||| ||||||||||||||||||| Sbjct: 19638006 cctccgcgccggcgacgaggagca 19637983 Score = 40.1 bits (20), Expect = 4.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 205 ggcgtccgcggcgacatccagtacatcaacgacgag 240 ||||||||||||||| | |||| |||||| |||||| Sbjct: 2185849 ggcgtccgcggcgacgtgcagttcatcaaggacgag 2185814
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 cggcgccggcgacgaggagc 292 |||||||||||||||||||| Sbjct: 7836408 cggcgccggcgacgaggagc 7836389
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ggcgccggcgacgaggagca 293 |||||||||||||||||||| Sbjct: 22683434 ggcgccggcgacgaggagca 22683453
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aatccaccgtgaagtctctg 156 |||||||||||||||||||| Sbjct: 1036550 aatccaccgtgaagtctctg 1036569
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tctctggtgagcaagctggg 170 |||||||||||||||||||| Sbjct: 45458 tctctggtgagcaagctggg 45439
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tctctggtgagcaagctggg 170 |||||||||||||||||||| Sbjct: 118421 tctctggtgagcaagctggg 118402
>gb|AF033217.1|AF033217 Anopheles farauti 6 internal transcribed spacer 2, complete sequence Length = 565 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cggcgacgaggagcacgacg 298 |||||||||||||||||||| Sbjct: 523 cggcgacgaggagcacgacg 542
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 cggcgccggcgacgaggagc 292 |||||||||||||||||||| Sbjct: 50790 cggcgccggcgacgaggagc 50771
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 cggcgccggcgacgaggagc 292 |||||||||||||||||||| Sbjct: 148906 cggcgccggcgacgaggagc 148887
>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041J06 Length = 138157 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 cctcggcgccggcgacgaggagca 293 |||| ||||||||||||||||||| Sbjct: 76656 cctccgcgccggcgacgaggagca 76633
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 40.1 bits (20), Expect = 4.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 205 ggcgtccgcggcgacatccagtacatcaacgacgag 240 ||||||||||||||| | |||| |||||| |||||| Sbjct: 53751 ggcgtccgcggcgacgtgcagttcatcaaggacgag 53716
>dbj|AK111286.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-H09, full insert sequence Length = 657 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ggcgccggcgacgaggagca 293 |||||||||||||||||||| Sbjct: 298 ggcgccggcgacgaggagca 317
>dbj|AK100802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K14, full insert sequence Length = 2509 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gcatgcaggccttcctcacc 267 |||||||||||||||||||| Sbjct: 1713 gcatgcaggccttcctcacc 1732
>emb|BX510324.7| Zebrafish DNA sequence from clone DKEY-18C8 in linkage group 20, complete sequence Length = 164369 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 gtaaatatccatcatcatcccatc 69 |||||||||||||||| ||||||| Sbjct: 131368 gtaaatatccatcatcttcccatc 131345
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aatccaccgtgaagtctctg 156 |||||||||||||||||||| Sbjct: 1308630 aatccaccgtgaagtctctg 1308649
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tccatcatcatcccatccat 72 |||||||||||||||||||| Sbjct: 2824539 tccatcatcatcccatccat 2824558
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aatccaccgtgaagtctctg 156 |||||||||||||||||||| Sbjct: 1223813 aatccaccgtgaagtctctg 1223832
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aatccaccgtgaagtctctg 156 |||||||||||||||||||| Sbjct: 907337 aatccaccgtgaagtctctg 907356
>emb|AL845530.7| Mouse DNA sequence from clone RP23-281B6 on chromosome 2, complete sequence Length = 189809 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gagctctgcagcatgcaggc 257 |||||||||||||||||||| Sbjct: 112936 gagctctgcagcatgcaggc 112955
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aatccaccgtgaagtctctg 156 |||||||||||||||||||| Sbjct: 2235633 aatccaccgtgaagtctctg 2235614
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aatccaccgtgaagtctctg 156 |||||||||||||||||||| Sbjct: 1064325 aatccaccgtgaagtctctg 1064344 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,570,208 Number of Sequences: 3902068 Number of extensions: 2570208 Number of successful extensions: 54243 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52783 Number of HSP's gapped (non-prelim): 1453 length of query: 334 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 312 effective length of database: 17,147,199,772 effective search space: 5349926328864 effective search space used: 5349926328864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
