>HSF_XENLA (P41154) Heat shock factor protein (HSF) (Heat shock transcription|
           factor) (HSTF)
          Length = 451

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
 Frame = +2

Query: 8   SYPIQ---KSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           SYP+     SSA P+I+ ++ LP++S   PSP P P   ++PSP
Sbjct: 236 SYPVSGFTDSSAGPIISDVTELPESS---PSPSPCPSLEASPSP 276

>STK39_RAT (O88506) STE20/SPS1-related proline-alanine-rich protein kinase (EC|
           2.7.11.1) (Ste-20-related kinase)
           (Serine/threonine-protein kinase 39) (Pancreatic
           serine/threonine-protein kinase) (PS/TK) (PSTK1)
          Length = 553

 Score = 32.0 bits (71), Expect = 0.49
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 32  APPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           A P+ A  +  P  +T +P+P PAP  P+AP+P
Sbjct: 17  AAPVTAAAA-APAAATSAPAPAPAPAAPAAPAP 48

>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
          Length = 646

 Score = 32.0 bits (71), Expect = 0.49
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 14  PIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           P  +SS PP    + FLP    D   P P P  P+ P+P
Sbjct: 459 PSNQSSLPPPPPSMDFLPPPPPDPMFPPPPPAPPAPPAP 497

>GUNA_MICBI (P26414) Endoglucanase A precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase)
          Length = 456

 Score = 31.6 bits (70), Expect = 0.64
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 8   SYPIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           +Y +  ++APP     ++ P  +  +PSP P+  +P +PSP
Sbjct: 314 AYELAMNAAPP-----TYSPSPTPSTPSPSPSQSDPGSPSP 349

>CO4B_HUMAN (P0C0L5) Complement C4-B precursor (Basic complement C4) [Contains:|
            Complement C4 beta chain; Complement C4-B alpha chain;
            C4a anaphylatoxin; C4b-B; C4d-B; Complement C4 gamma
            chain]
          Length = 1744

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 71   TSTDSPSPCPAPRNPSAPSPQ 133
            + +++ SP PAPRNPS P PQ
Sbjct: 1236 SQSNAVSPTPAPRNPSDPMPQ 1256

>CO4A_HUMAN (P0C0L4) Complement C4-A precursor (Acidic complement C4) [Contains:|
            Complement C4 beta chain; Complement C4-A alpha chain;
            C4a anaphylatoxin; C4b-A; C4d-A; Complement C4 gamma
            chain]
          Length = 1744

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 71   TSTDSPSPCPAPRNPSAPSPQ 133
            + +++ SP PAPRNPS P PQ
Sbjct: 1236 SQSNAVSPTPAPRNPSDPMPQ 1256

>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +2

Query: 14  PIQKSSAPPLIACL---SFLPKTSTDSPSPCPAPRNPSAPSP 130
           P+  S APP  A     S  P T + SPSP P+P    +PSP
Sbjct: 320 PVPPSPAPPSPAPSPPPSPAPPTPSPSPSPSPSPSPSPSPSP 361



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +2

Query: 14  PIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           P   S APP  A  S  P +      P PAP +PS P+P
Sbjct: 96  PAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAP 134



 Score = 29.3 bits (64), Expect = 3.2
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +2

Query: 14  PIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           P   S APP  A  S  P +      P PAP +P+ PSP
Sbjct: 53  PAPPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSP 91



 Score = 28.9 bits (63), Expect = 4.1
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +2

Query: 14  PIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           P   S APP     S  P +      P PAP +P+ PSP
Sbjct: 58  PAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPAPPSP 96



 Score = 28.1 bits (61), Expect = 7.1
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +2

Query: 14  PIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           P   S APP  A  S  P +      P P+P  P +PSP
Sbjct: 101 PAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSP 139

>SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)|
          Length = 791

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 14  PIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           PI     PP+I   +F+P     +P P PAP  P  P P
Sbjct: 635 PIMAPRPPPMIVPTAFVPAPPV-APVPAPAPMPPVHPPP 672

>SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-associated|
           protein 114) (SAP 114) (SF3a120)
          Length = 793

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 14  PIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           PI     PP+I   +F+P     +P P PAP  P  P P
Sbjct: 637 PIMAPRPPPMIVPTAFVPAPPV-APVPAPAPMPPVHPPP 674

>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa
           DNA-pairing protein) (hPOMp
          Length = 707

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 17/39 (43%), Positives = 18/39 (46%)
 Frame = +2

Query: 8   SYPIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAP 124
           S P   SSAPP     S  P  S   P+P P P   SAP
Sbjct: 123 SAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAP 161

>GDA6_WHEAT (P04726) Alpha/beta-gliadin clone PW1215 precursor (Prolamin)|
          Length = 296

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 41  LIACLSFLPKTSTDSPSPCPAPRNPSAPSPQ 133
           L+A ++    T+   P P P P+NPS P PQ
Sbjct: 9   LLAIVATTATTAVRVPVPQPQPQNPSQPQPQ 39

>PRDM2_HUMAN (Q13029) PR domain zinc finger protein 2 (PR domain-containing|
            protein 2) (Retinoblastoma protein-interacting
            zinc-finger protein) (Zinc finger protein RIZ)
            (MTE-binding protein) (MTB-ZF) (GATA-3-binding protein
            G3B)
          Length = 1718

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 35   PPLIACLSFLPKTSTDSPSPCPAP-RNPSAPSP 130
            PPL+  +     +S+ SP PCP+P  N +A SP
Sbjct: 987  PPLLPTVPLPAPSSSASPHPCPSPLSNATAQSP 1019

>HXA5_HUMAN (P20719) Homeobox protein Hox-A5 (Hox-1C)|
          Length = 270

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +2

Query: 65  PKTSTDSPSPCPAPRNPSAPSP 130
           P TST SP P P P +  APSP
Sbjct: 89  PATSTHSPQPDPLPCSAVAPSP 110

>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 3/22 (13%)
 Frame = +2

Query: 74   STDSPSPCPA---PRNPSAPSP 130
            ST +PSP PA   PR+P AP+P
Sbjct: 1504 STQTPSPAPASDMPRSPGAPTP 1525

>SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor (SSG 185)|
          Length = 485

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 65  PKTSTDSPSPCPAPRNPSAPSP 130
           P  S+  PSP P+PR PS P P
Sbjct: 235 PTASSRPPSPPPSPRPPSPPPP 256

>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
           (ALL1-related protein)
          Length = 5262

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +2

Query: 29  SAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           S PP ++ LS LP  S  SP P  +P +P A SP
Sbjct: 645 SPPPEVSRLSPLPVVSRLSPPPEESPLSPPALSP 678

>CHEB2_PSEF5 (Q4KG36) Chemotaxis response regulator protein-glutamate|
           methylesterase 2 (EC 3.1.1.61)
          Length = 373

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 5   YSYPIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPS 127
           YS P  + ++ P  A  SF    S+ SP+P PAP   +AP+
Sbjct: 139 YSAPAPQPASAPAPAPSSF---ASSRSPAPAPAPARAAAPA 176

>HXA5_MOUSE (P09021) Homeobox protein Hox-A5 (Hox-1.3) (M2)|
          Length = 270

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +2

Query: 65  PKTSTDSPSPCPAPRNPSAPSP 130
           P TST SP P P P +  APSP
Sbjct: 89  PATSTHSPPPDPLPCSAVAPSP 110

>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing|
           mediator of retinoic acid and thyroid hormone receptor)
           (SMRT) (SMRTe) (Thyroid-,
           retinoic-acid-receptor-associated corepressor) (T3
           receptor-associating factor) (TRAC) (CTG repeat p
          Length = 2517

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 74  STDSPSPCPAPRNPSAPSP 130
           +T +P+P PAP +PSAP P
Sbjct: 802 ATGAPTPPPAPPSPSAPPP 820

>STK39_MOUSE (Q9Z1W9) STE20/SPS1-related proline-alanine-rich protein kinase (EC|
           2.7.11.1) (Ste-20-related kinase)
           (Serine/threonine-protein kinase 39)
          Length = 556

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 32  APPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           A P+ A  +  P  +T +P+P PAP   ++ +P
Sbjct: 17  AAPVTAAAATAPAAATSAPAPAPAPAPAASAAP 49

>ATX2L_MOUSE (Q7TQH0) Ataxin-2-like protein|
          Length = 1049

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = +2

Query: 14  PIQKSSAPPLIACLSFLPKTSTDSP----SPCPAPRNPSAPSP 130
           P  ++S PP  A L FLP      P    S  PAP + S P P
Sbjct: 427 PSGEASVPPTSAALPFLPVGRMYPPRSPKSAAPAPVSASCPEP 469

>WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)|
           (Protein kinase with no lysine 4) (Protein kinase,
           lysine-deficient 4)
          Length = 1222

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 11  YPIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAP 124
           YP   SS  PL +  S +P  S+  P   P P +PS P
Sbjct: 842 YPQAPSSLLPLSSSASQVPLPSSSLPISAPLPFSPSYP 879

>NOTC4_MOUSE (P31695) Neurogenic locus notch homolog protein 4 precursor (Notch 4)|
            [Contains: Transforming protein Int-3; Notch 4
            extracellular truncation; Notch 4 intracellular domain]
          Length = 1964

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 17/43 (39%), Positives = 19/43 (44%)
 Frame = +2

Query: 2    GYSYPIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
            G   P  K  +PPL ACLS        +P   PAP     PSP
Sbjct: 1096 GLCLPSPKPGSPPLCACLSGFGGPDCLTP---PAPPGCGPPSP 1135

>Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 intergenic|
           region
          Length = 224

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = +2

Query: 14  PIQKSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSP 130
           P    S PP     S +P T T SP P P P  P+ PSP
Sbjct: 100 PTPTPSPPP-----SPIPPTPTPSPPPSPIPPTPT-PSP 132

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 83  SPSPCPAPRNPSAPSPQ 133
           SPSP P+P  P APSP+
Sbjct: 88  SPSPKPSPPKPPAPSPK 104



 Score = 27.7 bits (60), Expect = 9.2
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +2

Query: 26  SSAPPLIACLSFLPKTSTD---SPSPCPAPRNPSAPSP 130
           S AP  +   S  PK S     +PSP P+P  P APSP
Sbjct: 78  SPAPKPVPPPSPSPKPSPPKPPAPSPKPSPPKPPAPSP 115

>SPR2K_MOUSE (O70562) Small proline-rich protein 2K|
          Length = 68

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +2

Query: 23  KSSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSPQ 133
           K    PL  C    P +    P PCP P+ P    PQ
Sbjct: 9   KQLCQPLPVCPPPKPCSPPKCPEPCPPPKCPETCPPQ 45

>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase E1) (Cellulase E1)
           (Endocellulase E1)
          Length = 562

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 2   GYSYPIQKSSAPPLIACLSFLPKTSTD-SPSPCPAPRNPSAPSP 130
           GY  PI+ S   P+ A  S   + S   SPSP P+P     P+P
Sbjct: 386 GYLAPIKSSIFDPVGASASPSSQPSPSVSPSPSPSPSASRTPTP 429

>PCL_DROME (Q24459) Polycomb protein Pcl (Polycomblike protein)|
          Length = 1043

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 18/59 (30%)
 Frame = +2

Query: 8   SYPIQKSSAPPLIACLSFL----------------PKTSTDSPSPCPAPRNP--SAPSP 130
           S P + S +PPL+A  S L                P T    PSP P P  P  +APSP
Sbjct: 289 SSPGKSSPSPPLLATQSLLKGVNSMKPSFKTVEAAPPTPPTPPSPPPPPPAPPVAAPSP 347

>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 86  PSPCPAPRNPSAPSPQ 133
           P PCP+P  P AP+P+
Sbjct: 152 PVPCPSPPKPPAPTPK 167

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +2

Query: 5   YSYPIQK--SSAPPLIACLSFLPKTSTDSPSPCPAPRNPSAPSPQ 133
           YS PIQ+  S +PP        PK  T SP P P  R  ++PSPQ
Sbjct: 589 YSPPIQRRYSPSPP--------PKRRTASPPPPPKRR--ASPSPQ 623

>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3703

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
 Frame = +2

Query: 14   PIQKSSAP----PLIACLSFLPKTSTDSPSP-CPAPRNPSAPS 127
            P QK++ P    P +  L  LP+    +P P CP P++  +PS
Sbjct: 2460 PEQKTNTPQQKLPQLVSLPSLPQPPPQAPPPQCPLPQSSPSPS 2502

>NO551_SOYBN (Q05544) Early nodulin 55-1 (N-55-1) (Fragment)|
          Length = 137

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 65  PKTSTDSPSPCPAPRNPSAPSP 130
           P  S+ SPSP P+P    +PSP
Sbjct: 78  PSPSSPSPSPSPSPSPSPSPSP 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,537,750
Number of Sequences: 219361
Number of extensions: 275772
Number of successful extensions: 3396
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3221
length of database: 80,573,946
effective HSP length: 19
effective length of database: 76,406,087
effective search space used: 1833746088
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)