ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl24g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF448724.1| Sinorhizobium meliloti phage PBC5, complete genome 46 0.024
2ref|XM_954450.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.094
3ref|XM_325935.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.094
4gb|AY787925.1| Homo sapiens ubiquitin-like, containing PHD and R... 42 0.37
5gb|AC027319.5| Homo sapiens chromosome 19 clone CTC-518P12, comp... 42 0.37
6dbj|AK092964.1| Homo sapiens cDNA FLJ35645 fis, clone SPLEN2012611 42 0.37
7gb|AC083822.24| Homo sapiens 3 BAC RP11-106N22 (Roswell Park Can... 42 0.37
8gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome... 40 1.5
9gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome... 40 1.5
10gb|AY252634.1| Gerridae sp. WCW-Wellsboro 28S ribosomal RNA gene... 40 1.5
11ref|NM_214511.1| Strongylocentrotus purpuratus alpha2(IV)-like c... 40 1.5
12ref|XM_790428.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 1.5
13gb|AF031590.1| Streptomyces coelicolor thioredoxin (trxA) gene, ... 40 1.5
14emb|X76730.1|SPCOLP4 S.purpuratus mRNA for alpha2(IV)-like collagen 40 1.5
15emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 1.5
16dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.5
17dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 1.5
18gb|AY648147.1| Trepobates subnitidus 28S ribosomal RNA gene, par... 40 1.5
19gb|AF187159.1|AF187159 Streptomyces coelicolor TrxB (trxB) gene,... 40 1.5
20ref|NM_196488.1| Oryza sativa (japonica cultivar-group) putative... 38 5.8
21ref|NM_186143.1| Oryza sativa (japonica cultivar-group), mRNA 38 5.8
22ref|XM_472901.1| Oryza sativa (japonica cultivar-group), predic... 38 5.8
23gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome... 38 5.8
24ref|XM_870063.1| PREDICTED: Bos taurus similar to Beta-glucuroni... 38 5.8
25gb|AY359242.1| Pseudendoclonium akinetum mitochondrion, complete... 38 5.8
26emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chr... 38 5.8
27emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 38 5.8
28emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4,... 38 5.8
29gb|BC095844.1| Rattus norvegicus similar to CD27 antigen precurs... 38 5.8
30emb|CR450730.4| Zebrafish DNA sequence from clone DKEY-43P5 in l... 38 5.8
31ref|NM_001024335.1| Rattus norvegicus similar to CD27 antigen pr... 38 5.8
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
33dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
36dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
37dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
38gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 38 5.8
39dbj|AK119782.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.8
40dbj|AK064079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.8
41gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 5.8
42gb|AC087556.30| Mus musculus strain C57BL/6J chromosome 16 clone... 38 5.8
43emb|AJ133689.1|EBR133689 Epichloe bromicola size variable genomi... 38 5.8
44emb|AJ133688.1|EBR133688 Epichloe bromicola size variable genomi... 38 5.8 
>gb|AF448724.1| Sinorhizobium meliloti phage PBC5, complete genome
          Length = 57416

 Score = 46.1 bits (23), Expect = 0.024
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 24    ctcgcccgccgcgcccatggtttcctcgccc 54
             |||| ||||||||| ||||||||||||||||
Sbjct: 35429 ctcggccgccgcgcgcatggtttcctcgccc 35459
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>ref|XM_954450.1| Neurospora crassa OR74A hypothetical protein (NCU06081.1) partial
           mRNA
          Length = 828

 Score = 44.1 bits (22), Expect = 0.094
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 65  gggaggaggagggcggtggccc 86
           ||||||||||||||||||||||
Sbjct: 331 gggaggaggagggcggtggccc 310
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>ref|XM_325935.1| Neurospora crassa OR74A hypothetical protein (NCU06081.1) partial
           mRNA
          Length = 828

 Score = 44.1 bits (22), Expect = 0.094
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 65  gggaggaggagggcggtggccc 86
           ||||||||||||||||||||||
Sbjct: 331 gggaggaggagggcggtggccc 310
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>gb|AY787925.1| Homo sapiens ubiquitin-like, containing PHD and RING finger domains, 1
             (UHRF1) gene, complete cds
          Length = 52987

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    tagggaggaggagggcggtgg 83
             |||||||||||||||||||||
Sbjct: 35831 tagggaggaggagggcggtgg 35851
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>gb|AC027319.5| Homo sapiens chromosome 19 clone CTC-518P12, complete sequence
          Length = 152033

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 63   tagggaggaggagggcggtgg 83
            |||||||||||||||||||||
Sbjct: 7395 tagggaggaggagggcggtgg 7375
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>dbj|AK092964.1| Homo sapiens cDNA FLJ35645 fis, clone SPLEN2012611
          Length = 2008

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 66  ggaggaggagggcggtggccc 86
           |||||||||||||||||||||
Sbjct: 610 ggaggaggagggcggtggccc 630
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>gb|AC083822.24| Homo sapiens 3 BAC RP11-106N22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 67270

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    ggaggaggagggcggtggccc 86
             |||||||||||||||||||||
Sbjct: 54042 ggaggaggagggcggtggccc 54062
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>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0111O13, complete sequence
          Length = 126332

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    agggaggaggagggcggtgg 83
             ||||||||||||||||||||
Sbjct: 15613 agggaggaggagggcggtgg 15594
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>gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0069I13, complete sequence
          Length = 94252

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    agggaggaggagggcggtgg 83
             ||||||||||||||||||||
Sbjct: 52411 agggaggaggagggcggtgg 52392
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>gb|AY252634.1| Gerridae sp. WCW-Wellsboro 28S ribosomal RNA gene, partial
          sequence
          Length = 517

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 55 gcctcccctagggaggaggagggc 78
          |||| |||||||||||||||||||
Sbjct: 74 gccttccctagggaggaggagggc 97
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>ref|NM_214511.1| Strongylocentrotus purpuratus alpha2(IV)-like collagen (COLP4alpha),
            mRNA
          Length = 6143

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    ctactggctgaccaccaacg 20
            ||||||||||||||||||||
Sbjct: 5137 ctactggctgaccaccaacg 5156
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>ref|XM_790428.1| PREDICTED: Strongylocentrotus purpuratus similar to CoLlagen,
           Basement membrane type, LEThal LET-2, SUPpressor SUP-20
           (let-2) (LOC590841), mRNA
          Length = 1377

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 1   ctactggctgaccaccaacg 20
           ||||||||||||||||||||
Sbjct: 597 ctactggctgaccaccaacg 616
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>gb|AF031590.1| Streptomyces coelicolor thioredoxin (trxA) gene, partial cds;
            SpoOJ-like, Soj-like, GidB-like, Jag-like, inner membrane
            protein, and 9-10kDa protein-like genes, complete cds;
            RNase P protein (rnpA) gene, partial cds; and unknown
            gene
          Length = 6676

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    ctactggctgaccaccaacg 20
            ||||||||||||||||||||
Sbjct: 5493 ctactggctgaccaccaacg 5474
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>emb|X76730.1|SPCOLP4 S.purpuratus mRNA for alpha2(IV)-like collagen
          Length = 6143

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    ctactggctgaccaccaacg 20
            ||||||||||||||||||||
Sbjct: 5137 ctactggctgaccaccaacg 5156
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     ctactggctgaccaccaacg 20
             ||||||||||||||||||||
Sbjct: 47795 ctactggctgaccaccaacg 47814
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 64      agggaggaggagggcggtgg 83
               ||||||||||||||||||||
Sbjct: 2183182 agggaggaggagggcggtgg 2183163
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       ctactggctgaccaccaacg 20
               ||||||||||||||||||||
Sbjct: 5283955 ctactggctgaccaccaacg 5283936
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>gb|AY648147.1| Trepobates subnitidus 28S ribosomal RNA gene, partial sequence
          Length = 558

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 55  gcctcccctagggaggaggagggc 78
           |||| |||||||||||||||||||
Sbjct: 467 gccttccctagggaggaggagggc 444
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>gb|AF187159.1|AF187159 Streptomyces coelicolor TrxB (trxB) gene, partial cds; and TrxA
            (trxA), Orf205, ParB (parB), ParA (parA), GidB (gidB),
            Jag (jag), Orf431, Orf124, RNase P protein (rnpB),
            ribosomal protein rpmH (rpmH), DnaA (dnaA), and DnaN
            (dnaN) genes, complete cds
          Length = 12198

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    ctactggctgaccaccaacg 20
            ||||||||||||||||||||
Sbjct: 6166 ctactggctgaccaccaacg 6147
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>ref|NM_196488.1| Oryza sativa (japonica cultivar-group) putative proline
          transporter 1 (OSJNBa0032I20.1), mRNA
          Length = 1221

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 66 ggaggaggagggcggtggc 84
          |||||||||||||||||||
Sbjct: 27 ggaggaggagggcggtggc 45
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>ref|NM_186143.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 663

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 65  gggaggaggagggcggtgg 83
           |||||||||||||||||||
Sbjct: 645 gggaggaggagggcggtgg 627
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>ref|XM_472901.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 702

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 66  ggaggaggagggcggtggc 84
           |||||||||||||||||||
Sbjct: 427 ggaggaggagggcggtggc 409
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>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC
              nbxb0045B21, complete sequence
          Length = 152397

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     ggaggaggagggcggtggc 84
              |||||||||||||||||||
Sbjct: 151952 ggaggaggagggcggtggc 151970
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>ref|XM_870063.1| PREDICTED: Bos taurus similar to Beta-glucuronidase precursor
           (Beta-G1) (LOC515687), partial mRNA
          Length = 1733

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 64  agggaggaggagggcggtg 82
           |||||||||||||||||||
Sbjct: 151 agggaggaggagggcggtg 169
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>gb|AY359242.1| Pseudendoclonium akinetum mitochondrion, complete genome
          Length = 95880

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    tttgccctcgctccgcggc 108
             |||||||||||||||||||
Sbjct: 30000 tttgccctcgctccgcggc 30018
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>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the 3'
              end of the PEX14 gene for peroxisomal biogenesis factor 14,
              the 3' end of the gene for a novel protein (FLJ34970,
              FLJ20321, FLJ12223) and two CpG islands, complete sequence
          Length = 143285

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 64     agggaggaggagggcggtg 82
              |||||||||||||||||||
Sbjct: 135030 agggaggaggagggcggtg 135048
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>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 42     ggtttcctcgcccgcctcc 60
              |||||||||||||||||||
Sbjct: 209372 ggtttcctcgcccgcctcc 209390
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>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18,
              complete sequence
          Length = 176615

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     ggaggaggagggcggtggc 84
              |||||||||||||||||||
Sbjct: 147940 ggaggaggagggcggtggc 147922
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>gb|BC095844.1| Rattus norvegicus similar to CD27 antigen precursor - mouse, mRNA
           (cDNA clone MGC:112688 IMAGE:7389613), complete cds
          Length = 1602

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  ccctagggaggaggagggc 78
           |||||||||||||||||||
Sbjct: 744 ccctagggaggaggagggc 762
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>emb|CR450730.4| Zebrafish DNA sequence from clone DKEY-43P5 in linkage group 4,
             complete sequence
          Length = 121826

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    tagggaggaggagggcggt 81
             |||||||||||||||||||
Sbjct: 85160 tagggaggaggagggcggt 85178
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>ref|NM_001024335.1| Rattus norvegicus similar to CD27 antigen precursor - mouse
           (MGC112688), mRNA
          Length = 1602

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  ccctagggaggaggagggc 78
           |||||||||||||||||||
Sbjct: 744 ccctagggaggaggagggc 762
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 66       ggaggaggagggcggtggc 84
                |||||||||||||||||||
Sbjct: 23982967 ggaggaggagggcggtggc 23982949
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 66       ggaggaggagggcggtggc 84
                |||||||||||||||||||
Sbjct: 13984462 ggaggaggagggcggtggc 13984480



 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 66       ggaggaggagggcggtggc 84
                |||||||||||||||||||
Sbjct: 13983326 ggaggaggagggcggtggc 13983344
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 65     gggaggaggagggcggtgg 83
              |||||||||||||||||||
Sbjct: 411945 gggaggaggagggcggtgg 411963
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 65       gggaggaggagggcggtgg 83
                |||||||||||||||||||
Sbjct: 17447720 gggaggaggagggcggtgg 17447702
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>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0585H11
          Length = 149371

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 65    gggaggaggagggcggtgg 83
             |||||||||||||||||||
Sbjct: 14109 gggaggaggagggcggtgg 14127
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>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0040H05
          Length = 172623

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 65    gggaggaggagggcggtgg 83
             |||||||||||||||||||
Sbjct: 59717 gggaggaggagggcggtgg 59699
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>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete
           sequence
          Length = 144651

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 66  ggaggaggagggcggtggc 84
           |||||||||||||||||||
Sbjct: 591 ggaggaggagggcggtggc 609
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>dbj|AK119782.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F03, full
           insert sequence
          Length = 1547

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 66  ggaggaggagggcggtggc 84
           |||||||||||||||||||
Sbjct: 104 ggaggaggagggcggtggc 122
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>dbj|AK064079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-A10,
          full insert sequence
          Length = 1444

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 66 ggaggaggagggcggtggc 84
          |||||||||||||||||||
Sbjct: 76 ggaggaggagggcggtggc 94
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 66       ggaggaggagggcggtggc 84
                |||||||||||||||||||
Sbjct: 13992704 ggaggaggagggcggtggc 13992722



 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 66       ggaggaggagggcggtggc 84
                |||||||||||||||||||
Sbjct: 13990668 ggaggaggagggcggtggc 13990686
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>gb|AC087556.30| Mus musculus strain C57BL/6J chromosome 16 clone rp23-123l9, complete
              sequence
          Length = 219730

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 64     agggaggaggagggcggtggccc 86
              |||||||| ||||||||||||||
Sbjct: 149541 agggaggaagagggcggtggccc 149563
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>emb|AJ133689.1|EBR133689 Epichloe bromicola size variable genomic sequence (smaller allele),
           containing binding site of primers S1-F and OP-S1,
           strain V321
          Length = 390

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 20  gcatctcgcccgccgcgcc 38
           |||||||||||||||||||
Sbjct: 281 gcatctcgcccgccgcgcc 299
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>emb|AJ133688.1|EBR133688 Epichloe bromicola size variable genomic sequence (smaller allele),
           containing binding site of primers S1-F and OP-S1,
           strain A69,
          Length = 390

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 20  gcatctcgcccgccgcgcc 38
           |||||||||||||||||||
Sbjct: 281 gcatctcgcccgccgcgcc 299


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,481,039
Number of Sequences: 3902068
Number of extensions: 1481039
Number of successful extensions: 99110
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98502
Number of HSP's gapped (non-prelim): 608
length of query: 125
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 104
effective length of database: 17,151,101,840
effective search space: 1783714591360
effective search space used: 1783714591360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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