>ref|NM_185417.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 501

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 36  agtcgccggagcagatcag 54
           |||||||||||||||||||
Sbjct: 404 agtcgccggagcagatcag 422

>ref|NM_186291.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 495

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 36  agtcgccggagcagatcag 54
           |||||||||||||||||||
Sbjct: 395 agtcgccggagcagatcag 413

>ref|NM_186284.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 474

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 36  agtcgccggagcagatcag 54
           |||||||||||||||||||
Sbjct: 377 agtcgccggagcagatcag 395

>gb|AY600991.1| Oryza sativa (japonica cultivar-group) skp1-like protein (osk2)
           mRNA, complete cds
          Length = 566

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 36  agtcgccggagcagatcag 54
           |||||||||||||||||||
Sbjct: 457 agtcgccggagcagatcag 475

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 13     gatctgcccgccgacaatg 31
              |||||||||||||||||||
Sbjct: 386820 gatctgcccgccgacaatg 386838

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 18      gcccgccgacaatggcgga 36
               |||||||||||||||||||
Sbjct: 3342131 gcccgccgacaatggcgga 3342113

>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
               complete sequence
          Length = 1476513

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 15      tctgcccgccgacaatggc 33
               |||||||||||||||||||
Sbjct: 1162712 tctgcccgccgacaatggc 1162694

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 36      agtcgccggagcagatcag 54
               |||||||||||||||||||
Sbjct: 2343964 agtcgccggagcagatcag 2343982



 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 36      agtcgccggagcagatcag 54
               |||||||||||||||||||
Sbjct: 2318097 agtcgccggagcagatcag 2318079

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 36     agtcgccggagcagatcag 54
              |||||||||||||||||||
Sbjct: 785973 agtcgccggagcagatcag 785955

>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0541H01
          Length = 157519

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    agtcgccggagcagatcag 54
             |||||||||||||||||||
Sbjct: 69107 agtcgccggagcagatcag 69089

>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077B15
          Length = 139345

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    agtcgccggagcagatcag 54
             |||||||||||||||||||
Sbjct: 46972 agtcgccggagcagatcag 46990



 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    agtcgccggagcagatcag 54
             |||||||||||||||||||
Sbjct: 21105 agtcgccggagcagatcag 21087

>ref|NM_211947.1| Eremothecium gossypii AGR219Wp (AGR219W), mRNA
          Length = 1329

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 15  tctgcccgccgacaatggc 33
           |||||||||||||||||||
Sbjct: 316 tctgcccgccgacaatggc 298

>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1343_B12
          Length = 121362

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     agtcgccggagcagatcag 54
              |||||||||||||||||||
Sbjct: 117663 agtcgccggagcagatcag 117681



 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    agtcgccggagcagatcag 54
             |||||||||||||||||||
Sbjct: 91796 agtcgccggagcagatcag 91778

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 13      gatctgcccgccgacaatggcg 34
               |||| |||||||||||||||||
Sbjct: 3492984 gatcagcccgccgacaatggcg 3493005

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 37      gtcgccggagcagatcag 54
               ||||||||||||||||||
Sbjct: 2323141 gtcgccggagcagatcag 2323158



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 37      gtcgccggagcagatcag 54
               ||||||||||||||||||
Sbjct: 2173103 gtcgccggagcagatcag 2173120



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 37      gtcgccggagcagatcag 54
               ||||||||||||||||||
Sbjct: 2109203 gtcgccggagcagatcag 2109186



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 37      gtcgccggagcagatcag 54
               ||||||||||||||||||
Sbjct: 1937901 gtcgccggagcagatcag 1937884



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 37      gtcgccggagcagatcag 54
               ||||||||||||||||||
Sbjct: 1644814 gtcgccggagcagatcag 1644831



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 37      gtcgccggagcagatcag 54
               ||||||||||||||||||
Sbjct: 1551370 gtcgccggagcagatcag 1551387



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 37      gtcgccggagcagatcag 54
               ||||||||||||||||||
Sbjct: 1490040 gtcgccggagcagatcag 1490057



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 37      gtcgccggagcagatcag 54
               ||||||||||||||||||
Sbjct: 1426405 gtcgccggagcagatcag 1426388



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 37      gtcgccggagcagatcag 54
               ||||||||||||||||||
Sbjct: 1028825 gtcgccggagcagatcag 1028842



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 37     gtcgccggagcagatcag 54
              ||||||||||||||||||
Sbjct: 962325 gtcgccggagcagatcag 962342



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 37     gtcgccggagcagatcag 54
              ||||||||||||||||||
Sbjct: 781665 gtcgccggagcagatcag 781682



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 37     gtcgccggagcagatcag 54
              ||||||||||||||||||
Sbjct: 606059 gtcgccggagcagatcag 606076



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 37     gtcgccggagcagatcag 54
              ||||||||||||||||||
Sbjct: 547738 gtcgccggagcagatcag 547755



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 37     gtcgccggagcagatcag 54
              ||||||||||||||||||
Sbjct: 435356 gtcgccggagcagatcag 435373



 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 37    gtcgccggagcagatcag 54
             ||||||||||||||||||
Sbjct: 57601 gtcgccggagcagatcag 57618

>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 31     ggcggagtcgccggagcagatc 52
              ||||||||||||||||| ||||
Sbjct: 781804 ggcggagtcgccggagccgatc 781825

>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 19     cccgccgacaatggcggagtcg 40
              ||||||||||||||||| ||||
Sbjct: 419822 cccgccgacaatggcggcgtcg 419801

>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 5      ccgctccagatctgcccg 22
              ||||||||||||||||||
Sbjct: 266658 ccgctccagatctgcccg 266641

>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 5      ccgctccagatctgcccg 22
              ||||||||||||||||||
Sbjct: 178126 ccgctccagatctgcccg 178109

>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 5      ccgctccagatctgcccg 22
              ||||||||||||||||||
Sbjct: 329426 ccgctccagatctgcccg 329443

>gb|DP000062.1| Sus scrofa target 117 genomic scaffold
          Length = 605739

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 11     cagatctgcccgccgaca 28
              ||||||||||||||||||
Sbjct: 370363 cagatctgcccgccgaca 370380

>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 28      aatggcggagtcgccggagcag 49
               |||||| |||||||||||||||
Sbjct: 2492693 aatggctgagtcgccggagcag 2492672

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 13      gatctgcccgccgacaatggcg 34
               |||| |||||||||||||||||
Sbjct: 4035806 gatcagcccgccgacaatggcg 4035827

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 37      gtcgccggagcagatcag 54
               ||||||||||||||||||
Sbjct: 1572669 gtcgccggagcagatcag 1572652

>gb|AE004854.1| Pseudomonas aeruginosa PAO1, section 415 of 529 of the complete
            genome
          Length = 11884

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 29   atggcggagtcgccggag 46
            ||||||||||||||||||
Sbjct: 987  atggcggagtcgccggag 1004

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 36      agtcgccggagcagatca 53
               ||||||||||||||||||
Sbjct: 3305514 agtcgccggagcagatca 3305531

>gb|AE005091.1| Halobacterium sp. NRC-1 section 122 of 170 of the complete genome
          Length = 12431

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 21   cgccgacaatggcggagtcgcc 42
            |||||||| |||||||||||||
Sbjct: 4685 cgccgacagtggcggagtcgcc 4706

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 31      ggcggagtcgccggagca 48
               ||||||||||||||||||
Sbjct: 1659825 ggcggagtcgccggagca 1659842


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 289,770
Number of Sequences: 3902068
Number of extensions: 289770
Number of successful extensions: 113245
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112304
Number of HSP's gapped (non-prelim): 941
length of query: 54
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 34
effective length of database: 17,155,003,908
effective search space: 583270132872
effective search space used: 583270132872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)