ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl24g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome... 46 0.038
2gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome... 46 0.038
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.038
4dbj|AK120528.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.038
5dbj|AK108139.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.038
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.038
7gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 2.3
8gb|AC009116.8| Homo sapiens chromosome 16 clone RP11-477D3, comp... 40 2.3
9gb|AC025280.5| Homo sapiens chromosome 16 clone RP11-254F19, com... 40 2.3
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.3
12emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268... 40 2.3
13ref|XM_466909.1| Oryza sativa (japonica cultivar-group), mRNA 38 9.3
14ref|XM_472277.1| Oryza sativa (japonica cultivar-group), predic... 38 9.3
15gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome... 38 9.3
16gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 38 9.3
17gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 38 9.3
18ref|XM_814404.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 9.3
19gb|AY354515.1| Streptomyces sp. HK803 PlmR5 (plmR5), PlmR4 (plmR... 38 9.3
20emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 38 9.3
21emb|AL731643.4|OSJN00284 Oryza sativa genomic DNA, chromosome 4,... 38 9.3
22emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4,... 38 9.3
23gb|AE012371.1| Xanthomonas campestris pv. campestris str. ATCC 3... 38 9.3
24gb|AC099019.1| Drosophila melanogaster, chromosome 2R, region 58... 38 9.3
25gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 38 9.3
26gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 38 9.3
27dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
28dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
30dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
31dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
32dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
33dbj|AK109846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.3
34dbj|AK063500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.3
35dbj|AK061098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.3
36gb|AE003456.3| Drosophila melanogaster chromosome 2R, section 64... 38 9.3
37gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 38 9.3
38emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa... 38 9.3
39emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 38 9.3
40emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa... 38 9.3
41gb|AC002473.1|AC002473 Drosophila melanogaster (P1 DS02833 (D61)... 38 9.3 
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0038F07, complete sequence
          Length = 175703

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 162   cggatgccgcgcgacctgtcacggtcg 188
             |||||||||||||||||||| ||||||
Sbjct: 11127 cggatgccgcgcgacctgtcgcggtcg 11101
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>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16,
              complete sequence
          Length = 175425

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 162    cggatgccgcgcgacctgtcacggtcg 188
              |||||||||||||||||||| ||||||
Sbjct: 161364 cggatgccgcgcgacctgtcgcggtcg 161338
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 162      cggatgccgcgcgacctgtcacggtcg 188
                |||||||||||||||||||| ||||||
Sbjct: 19292576 cggatgccgcgcgacctgtcgcggtcg 19292550



 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 9        agcccgccgccgtcgccat 27
                |||||||||||||||||||
Sbjct: 13118666 agcccgccgccgtcgccat 13118648
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>dbj|AK120528.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127F10, full
           insert sequence
          Length = 2885

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 162 cggatgccgcgcgacctgtcacggtcg 188
           |||||||||||||||||||| ||||||
Sbjct: 178 cggatgccgcgcgacctgtcgcggtcg 204
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>dbj|AK108139.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-E06, full
           insert sequence
          Length = 574

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 162 cggatgccgcgcgacctgtcacggtcg 188
           |||||||||||||||||||| ||||||
Sbjct: 219 cggatgccgcgcgacctgtcgcggtcg 245
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 162      cggatgccgcgcgacctgtcacggtcg 188
                |||||||||||||||||||| ||||||
Sbjct: 19452125 cggatgccgcgcgacctgtcgcggtcg 19452099



 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 9        agcccgccgccgtcgccat 27
                |||||||||||||||||||
Sbjct: 13198845 agcccgccgccgtcgccat 13198827
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 29      gatgcccgcgcgccgtcccc 48
               ||||||||||||||||||||
Sbjct: 3028960 gatgcccgcgcgccgtcccc 3028941
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>gb|AC009116.8| Homo sapiens chromosome 16 clone RP11-477D3, complete sequence
          Length = 172533

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      ctccagcccgccgccgtcgc 24
              ||||||||||||||||||||
Sbjct: 161274 ctccagcccgccgccgtcgc 161255
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>gb|AC025280.5| Homo sapiens chromosome 16 clone RP11-254F19, complete sequence
          Length = 174714

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      ctccagcccgccgccgtcgc 24
              ||||||||||||||||||||
Sbjct: 151398 ctccagcccgccgccgtcgc 151417
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 15       ccgccgtcgccattgatgcc 34
                ||||||||||||||||||||
Sbjct: 27225171 ccgccgtcgccattgatgcc 27225152



 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 7        ccagcccgccgccgtcgcc 25
                |||||||||||||||||||
Sbjct: 25648586 ccagcccgccgccgtcgcc 25648568



 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 10       gcccgccgccgtcgccatt 28
                |||||||||||||||||||
Sbjct: 22631609 gcccgccgccgtcgccatt 22631627
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 15       ccgccgtcgccattgatgcc 34
                ||||||||||||||||||||
Sbjct: 27150771 ccgccgtcgccattgatgcc 27150752



 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 7        ccagcccgccgccgtcgcc 25
                |||||||||||||||||||
Sbjct: 25576762 ccagcccgccgccgtcgcc 25576744



 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 10       gcccgccgccgtcgccatt 28
                |||||||||||||||||||
Sbjct: 22559800 gcccgccgccgtcgccatt 22559818
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>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146585

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ccgccgtcgccattgatgcc 34
             ||||||||||||||||||||
Sbjct: 38203 ccgccgtcgccattgatgcc 38184
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>ref|XM_466909.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1587

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 92  ccgtccccgatctccccgc 110
           |||||||||||||||||||
Sbjct: 435 ccgtccccgatctccccgc 453
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>ref|XM_472277.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 711

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 4   tctccagcccgccgccgtcgcca 26
           ||||||||||||||||| |||||
Sbjct: 100 tctccagcccgccgccgccgcca 78
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>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0086N07 map S790A, complete sequence
          Length = 178523

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     agcccgccgccgtcgccat 27
             |||||||||||||||||||
Sbjct: 65414 agcccgccgccgtcgccat 65432
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     ttgatgcccgcgcgccgtc 45
              |||||||||||||||||||
Sbjct: 902444 ttgatgcccgcgcgccgtc 902426
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 27      ttgatgcccgcgcgccgtc 45
               |||||||||||||||||||
Sbjct: 1945053 ttgatgcccgcgcgccgtc 1945035
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>ref|XM_814404.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507641.220) partial mRNA
          Length = 2316

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   gtccccgatctccccgcac 112
            |||||||||||||||||||
Sbjct: 1375 gtccccgatctccccgcac 1393
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>gb|AY354515.1| Streptomyces sp. HK803 PlmR5 (plmR5), PlmR4 (plmR4), PlmR3 (plmR3),
            PlmR2 (plmR2), Plm8 (plm8), Plm4 (plm4), Plm5 (plm5),
            Plm6 (plm6), Plm7 (plm7), PlmT8 (plmT8), PlmT7 (plmT7),
            PlmT6 (plmT6), PlmT5 (plmT5), PlmT4 (plmT4), PlmT3
            (plmT3), PlmT2 (plmT2), PlmT1 (plmT1), Plm1 (plm1),
            Plm2-3 (plm2-3), PlmJK (plmJK), PlmL (plmL), ChcA (chcA),
            PlmM (plmM), PlmR1 (plmR1), PlmI (plmI), PlmS2 (plmS2),
            PlmS3 (plmS3), and PlmS4 (plmS4) genes, complete cds
          Length = 76196

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 5    ctccagcccgccgccgtcg 23
            |||||||||||||||||||
Sbjct: 1402 ctccagcccgccgccgtcg 1420
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 27      ttgatgcccgcgcgccgtc 45
               |||||||||||||||||||
Sbjct: 2431783 ttgatgcccgcgcgccgtc 2431801
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>emb|AL731643.4|OSJN00284 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085C10,
              complete sequence
          Length = 202924

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 7      ccagcccgccgccgtcgcc 25
              |||||||||||||||||||
Sbjct: 181896 ccagcccgccgccgtcgcc 181878
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>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19,
             complete sequence
          Length = 188317

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 4     tctccagcccgccgccgtcgcca 26
             ||||||||||||||||| |||||
Sbjct: 98754 tctccagcccgccgccgccgcca 98732
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>gb|AE012371.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 279
            of 460 of the complete genome
          Length = 10772

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 129  gtgccgggcaccgcggtgg 147
            |||||||||||||||||||
Sbjct: 5019 gtgccgggcaccgcggtgg 5001
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>gb|AC099019.1| Drosophila melanogaster, chromosome 2R, region 58C-58D, BAC clone
             BACR02O12, complete sequence
          Length = 171594

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    attgatgcccgcgcgccgt 44
             |||||||||||||||||||
Sbjct: 78711 attgatgcccgcgcgccgt 78693
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 8       cagcccgccgccgtcgcca 26
               |||||||||||||||||||
Sbjct: 2504357 cagcccgccgccgtcgcca 2504339
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 129     gtgccgggcaccgcggtgg 147
               |||||||||||||||||||
Sbjct: 1830574 gtgccgggcaccgcggtgg 1830592
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 4        tctccagcccgccgccgtcgcca 26
                ||||||||||||||||| |||||
Sbjct: 19006829 tctccagcccgccgccgccgcca 19006807



 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 7       ccagcccgccgccgtcgcc 25
               |||||||||||||||||||
Sbjct: 7793560 ccagcccgccgccgtcgcc 7793542
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 92       ccgtccccgatctccccgc 110
                |||||||||||||||||||
Sbjct: 25411902 ccgtccccgatctccccgc 25411920



 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 12       ccgccgccgtcgccattga 30
                |||||||||||||||||||
Sbjct: 10753308 ccgccgccgtcgccattga 10753326
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 12       ccgccgccgtcgccattgatgcc 34
                |||||||||||||||| ||||||
Sbjct: 23508339 ccgccgccgtcgccatggatgcc 23508317
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>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025A05
          Length = 154298

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 12    ccgccgccgtcgccattgatgcc 34
             |||||||||||||||| ||||||
Sbjct: 71644 ccgccgccgtcgccatggatgcc 71622
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>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1643_A10
          Length = 130037

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 92    ccgtccccgatctccccgc 110
             |||||||||||||||||||
Sbjct: 67564 ccgtccccgatctccccgc 67582
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>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1115_D03
          Length = 169378

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    ccgccgccgtcgccattga 30
             |||||||||||||||||||
Sbjct: 92789 ccgccgccgtcgccattga 92807
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>dbj|AK109846.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E10, full
           insert sequence
          Length = 1898

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 12  ccgccgccgtcgccattgatgcc 34
           |||||||||||||||| ||||||
Sbjct: 114 ccgccgccgtcgccatggatgcc 136
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>dbj|AK063500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-E03, full
           insert sequence
          Length = 1587

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 92  ccgtccccgatctccccgc 110
           |||||||||||||||||||
Sbjct: 435 ccgtccccgatctccccgc 453
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>dbj|AK061098.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A08, full
           insert sequence
          Length = 1015

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 10  gcccgccgccgtcgccatt 28
           |||||||||||||||||||
Sbjct: 142 gcccgccgccgtcgccatt 160
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>gb|AE003456.3| Drosophila melanogaster chromosome 2R, section 64 of 73 of the complete
              sequence
          Length = 288451

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 26     attgatgcccgcgcgccgt 44
              |||||||||||||||||||
Sbjct: 169515 attgatgcccgcgcgccgt 169533
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 156     tccagccggatgccgcgcg 174
               |||||||||||||||||||
Sbjct: 4650661 tccagccggatgccgcgcg 4650679
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>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 167131

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     ccagcccgccgccgtcgcc 25
             |||||||||||||||||||
Sbjct: 15824 ccagcccgccgccgtcgcc 15806
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>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127003

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     ccagcccgccgccgtcgcc 25
             |||||||||||||||||||
Sbjct: 25132 ccagcccgccgccgtcgcc 25150
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>emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa0027H05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138368

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    gcccgccgccgtcgccatt 28
             |||||||||||||||||||
Sbjct: 76729 gcccgccgccgtcgccatt 76747
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>gb|AC002473.1|AC002473 Drosophila melanogaster (P1 DS02833 (D61)) DNA sequence, complete
            sequence
          Length = 71504

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 26   attgatgcccgcgcgccgt 44
            |||||||||||||||||||
Sbjct: 2990 attgatgcccgcgcgccgt 3008


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 949,180
Number of Sequences: 3902068
Number of extensions: 949180
Number of successful extensions: 84415
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81862
Number of HSP's gapped (non-prelim): 2553
length of query: 188
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 166
effective length of database: 17,147,199,772
effective search space: 2846435162152
effective search space used: 2846435162152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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