ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl24g05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NDRG1_MOUSE (Q62433) Protein NDRG1 (N-myc downstream-regulated g... 31 0.68
2TRFL_CAMDR (Q9TUM0) Lactotransferrin precursor (EC 3.4.21.-) (La... 31 0.68
3YXBA_BACSU (P46325) Hypothetical protein yxbA 30 1.2
4TRFL_HORSE (O77811) Lactotransferrin precursor (EC 3.4.21.-) (La... 30 1.2
5WTF23_SCHPO (O94409) Hypothetical protein wtf23 30 1.5
6WTF19_SCHPO (O74486) Hypothetical protein wtf19 30 1.5
7MFAP3_RAT (Q6AYF7) Microfibril-associated glycoprotein 3 precursor 29 2.6
8MFAP3_MOUSE (Q922T2) Microfibril-associated glycoprotein 3 precu... 29 2.6
9YMJB_CAEEL (P34487) Hypothetical protein F59B2.12 29 3.4
10CWC15_SCHPO (P78794) Pre-mRNA-splicing factor cwc15 (Complexed w... 29 3.4
11ZN592_MOUSE (Q8BHZ4) Zinc finger protein 592 (Zfp-592) 28 4.4
12SEN2_NEUCR (Q9P6Y2) Probable tRNA-splicing endonuclease subunit ... 28 5.7
13MCM4_SCHPO (P29458) DNA replication licensing factor mcm4 (Minic... 28 5.7
14CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-bind... 28 5.7
15ROK1_ASPOR (Q2UQW3) ATP-dependent RNA helicase rok1 (EC 3.6.1.-) 28 5.7
16EXBD_SYNY3 (P72942) Putative biopolymer transport exbD protein 28 5.7
17CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-bind... 28 5.7
18E2AK2_MOUSE (Q03963) Interferon-induced, double-stranded RNA-act... 28 5.7
19ANR11_HUMAN (Q6UB99) Ankyrin repeat domain-containing protein 11... 28 5.7
20PYRF_BACHD (Q9K9W2) Orotidine 5'-phosphate decarboxylase (EC 4.1... 28 5.7
21KIC1_YEAST (P38692) Serine/threonine-protein kinase KIC1 (EC 2.7... 28 5.7
22SYA_METMA (Q8PWU0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 28 5.7
23SIR2_KLULA (P33294) NAD-dependent histone deacetylase SIR2 (EC 3... 28 7.5
24RAD50_HALSA (Q9HRW3) DNA double-strand break repair rad50 ATPase 28 7.5
25PYRF_STAS1 (Q49WY5) Orotidine 5'-phosphate decarboxylase (EC 4.1... 28 7.5
26ZN592_HUMAN (Q92610) Zinc finger protein 592 28 7.5
27BET1_SCHPO (O13932) Protein transport protein bet1 28 7.5
28Y059_NPVOP (O10316) Hypothetical 19.9 kDa protein (ORF62) 28 7.5
29MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog) (SMA... 27 9.8
30HIS8_LISIN (Q92A83) Histidinol-phosphate aminotransferase (EC 2.... 27 9.8
31UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (E... 27 9.8
32FBW1B_HUMAN (Q9UKB1) F-box/WD-repeat protein 11 (F-box/WD-repeat... 27 9.8
33SMG1_HUMAN (Q96Q15) Serine/threonine-protein kinase SMG1 (EC 2.7... 27 9.8
34SYA_METAC (Q8TU79) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 27 9.8

>NDRG1_MOUSE (Q62433) Protein NDRG1 (N-myc downstream-regulated gene 1 protein)|
           (Protein Ndr1)
          Length = 394

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
 Frame = +1

Query: 46  PSKQAEEVALKV-GLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTD-----ST 207
           P+K AE     V G+    SAS     L  SR  +G  V+S+E   S + +++     S 
Sbjct: 298 PAKLAEAFKYFVQGMGYMPSAS--MTRLMRSRTASGSSVTSLEGTRSRSHTSEGPRSRSH 355

Query: 208 AVNGIHSKINNLPDSRNHLSPNRGKNQRNKG 300
              G  S+ +   D+R +++PN G    N G
Sbjct: 356 TSEGSRSRSHTSEDARLNITPNSGATGNNAG 386



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>TRFL_CAMDR (Q9TUM0) Lactotransferrin precursor (EC 3.4.21.-) (Lactoferrin)|
          Length = 708

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 122 WSGPSEALSSKVRPTFSATSSACLDGK 42
           W+GP E L   V   FSA+   C+DGK
Sbjct: 157 WTGPPEPLQKAVAKFFSASCVPCVDGK 183



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>YXBA_BACSU (P46325) Hypothetical protein yxbA|
          Length = 89

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 7   LNDETTIDDSDGLPS-KQAEEVALKVGLTLEESASDGPDHLD 129
           +N+ T +  +  +PS K  + + ++ G+TL E ASD  +H+D
Sbjct: 2   INESTVLSKNPEMPSRKYLKSIIIEPGITLNEMASDIYNHID 43



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>TRFL_HORSE (O77811) Lactotransferrin precursor (EC 3.4.21.-) (Lactoferrin)|
           (Fragment)
          Length = 695

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -3

Query: 158 TLFPFVGLELSKWSGPSEALSSKVRPTFSATSSACLDGK 42
           TL P++      W+GP E L   V   FSA+   C DGK
Sbjct: 137 TLRPYLN-----WTGPPEPLQKAVANFFSASCVPCADGK 170



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>WTF23_SCHPO (O94409) Hypothetical protein wtf23|
          Length = 368

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +1

Query: 37  DGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDST 207
           D L +K   E+ L+ G   E ++ DG      S   N K    M ANN + F+TD +
Sbjct: 13  DELSAKNDNEIDLEKGPLPEYNSEDGSTLPPYSENINLKDPKQMGANNPNLFNTDES 69



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>WTF19_SCHPO (O74486) Hypothetical protein wtf19|
          Length = 393

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +1

Query: 37  DGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDST 207
           D L +K   E+ L+ G   E ++ DG      S   N K    M ANN + F+TD +
Sbjct: 13  DELSAKNDNEIDLEKGPLPEYNSEDGSTLPPYSENINLKDPKQMGANNPNLFNTDES 69



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>MFAP3_RAT (Q6AYF7) Microfibril-associated glycoprotein 3 precursor|
          Length = 347

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 28  DDSDGLPSKQAEEVALKVGLTLE-ESASDGPDHLDSS 135
           D  DG  S+Q +E+A++V + L+ E+ S G D  DSS
Sbjct: 292 DSDDGSLSEQGQEIAVQVSVHLQSETKSIGTDSQDSS 328



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>MFAP3_MOUSE (Q922T2) Microfibril-associated glycoprotein 3 precursor|
          Length = 349

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 28  DDSDGLPSKQAEEVALKVGLTLE-ESASDGPDHLDSS 135
           D  DG  S+Q +E+A++V + L+ E+ S G D  DSS
Sbjct: 292 DSDDGSLSEQGQEIAVQVSVHLQSETKSIGTDSQDSS 328



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>YMJB_CAEEL (P34487) Hypothetical protein F59B2.12|
          Length = 918

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 23/92 (25%), Positives = 40/92 (43%)
 Frame = +1

Query: 7   LNDETTIDDSDGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSS 186
           +   +T + +D     +A + A   G   E+   +G   L+ S   +G++  S   NN++
Sbjct: 362 IKSHSTSNKTDNYALDEANQSA---GSISEQIGKNGQRSLNESSIESGRKAESR--NNTA 416

Query: 187 AFSTDSTAVNGIHSKINNLPDSRNHLSPNRGK 282
           A + DS   NG  S  ++   S   L  N  K
Sbjct: 417 ADTLDSVDANGTVSSSHSKSASGTSLDENHNK 448



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>CWC15_SCHPO (P78794) Pre-mRNA-splicing factor cwc15 (Complexed with cdc5|
           protein 15) (Cell cycle control protein cwf15)
          Length = 265

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +1

Query: 4   RLNDETTIDDSDGLPSKQAE---EVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEA 174
           +L +  T   +D  P+   E   +  L+  L  +E ASD  D +DSS   +   +   + 
Sbjct: 82  KLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKT 141

Query: 175 NNSSAFSTDST 207
            ++S  S DS+
Sbjct: 142 ESNSQESVDSS 152



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>ZN592_MOUSE (Q8BHZ4) Zinc finger protein 592 (Zfp-592)|
          Length = 1262

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +1

Query: 7   LNDETTIDDSDGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSS 186
           +++  ++  S   P   A  V +K   + +ES     DH+  S   NG R S +  ++  
Sbjct: 48  IDENVSLSHSGSAPDVPAVSVIVK-NTSRQESFEAEKDHIAPSLLHNGFRGSDLPPDSHH 106

Query: 187 AFSTDSTAVNG 219
               DST +NG
Sbjct: 107 CGKFDSTFING 117



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>SEN2_NEUCR (Q9P6Y2) Probable tRNA-splicing endonuclease subunit sen-2 (EC|
           3.1.27.9) (tRNA-intron endonuclease sen-2)
          Length = 633

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
 Frame = +1

Query: 43  LPSKQAEEVALKVGLTLEESA------SDGPDHLDSSRPTNGK-RVSSMEANNSSAFSTD 201
           LP+   + VAL V   L E A      S   D L++S  TN +   S+ EAN+S++ S+ 
Sbjct: 301 LPNSLVDLVALSVVSVLSEDAGVDEDESSTEDQLEASALTNDEPETSATEANDSTSSSSP 360

Query: 202 STAVNGIHSKINNLPDSRNHLSPNRGKNQRNKGISIISYTE 324
                      + LPDS+          +R K +   S  E
Sbjct: 361 --------PHTDGLPDSQPTQENVPATPERRKSVRFSSTVE 393



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>MCM4_SCHPO (P29458) DNA replication licensing factor mcm4 (Minichromosome|
           maintenance protein 4) (Cell division control protein
           21)
          Length = 931

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +1

Query: 91  LEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDSTAVNGIHSKIN-NLPDSRNHLS 267
           L ES+S GP+   SSR     + + +  ++SS  +  ST    IHS +  + P  R  + 
Sbjct: 61  LFESSSPGPNIPQSSRSHLLSQRNDLFLDSSSQRTPRSTRRGDIHSSVQMSTPSRRREVD 120

Query: 268 PNR 276
           P R
Sbjct: 121 PQR 123



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>CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-binding protein A)|
            (Fibrinogen receptor A)
          Length = 935

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 23/96 (23%), Positives = 40/96 (41%)
 Frame = +1

Query: 10   NDETTIDDSDGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSA 189
            +D  +  DSD      +E  +     +  +SASD     DS   ++    S+ +  + + 
Sbjct: 797  SDSDSESDSDSDSDSDSESDSDSDSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDND 856

Query: 190  FSTDSTAVNGIHSKINNLPDSRNHLSPNRGKNQRNK 297
              +DS + +   S  N +P +    SP  G N  NK
Sbjct: 857  SDSDSNSDSESGSNNNVVPPN----SPKNGTNASNK 888



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>ROK1_ASPOR (Q2UQW3) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)|
          Length = 725

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 21/74 (28%), Positives = 25/74 (33%)
 Frame = +1

Query: 85  LTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDSTAVNGIHSKINNLPDSRNHL 264
           LT       GP    +S P+ GK  +     NS A        NG   K  +  D     
Sbjct: 7   LTRSTKFKTGPSSSSASLPSTGKAENPQLFRNSEAEKLLEEQKNGKKRKRGSAADEPEER 66

Query: 265 SPNRGKNQRNKGIS 306
            PN      NKG S
Sbjct: 67  EPNLDFFSSNKGSS 80



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>EXBD_SYNY3 (P72942) Putative biopolymer transport exbD protein|
          Length = 269

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +1

Query: 145 NGKRVSSMEANNSSAFSTDSTAVNGIHSKINNLPDSRNHLSPNRGKN 285
           NG        NNS+   + +   N  ++ +  +PD+  ++SPN G N
Sbjct: 190 NGANPGMSNFNNSNPGGSGAGVPNFSNTPLPGMPDANGNVSPNPGMN 236



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>CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-binding protein A)|
            (Fibrinogen receptor A)
          Length = 989

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 23/96 (23%), Positives = 40/96 (41%)
 Frame = +1

Query: 10   NDETTIDDSDGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSA 189
            +D  +  DSD      +E  +     +  +SASD     DS   ++    S+ +  + + 
Sbjct: 851  SDSDSESDSDSDSDSDSESDSDSDSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDND 910

Query: 190  FSTDSTAVNGIHSKINNLPDSRNHLSPNRGKNQRNK 297
              +DS + +   S  N +P +    SP  G N  NK
Sbjct: 911  SDSDSNSDSESGSNNNVVPPN----SPKNGTNASNK 942



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>E2AK2_MOUSE (Q03963) Interferon-induced, double-stranded RNA-activated protein|
           kinase (EC 2.7.11.1) (Interferon-inducible RNA-dependent
           protein kinase) (Protein kinase RNA-activated) (PKR)
           (p68 kinase) (P1/eIF-2A protein kinase)
           (Serine/threonine-protein
          Length = 515

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
 Frame = +1

Query: 82  GLTLEES----ASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDSTAV-NGIHSKINNLP 246
           G+T +E+    A +    L  S P      SS+  +  S FS+ S+   NG+        
Sbjct: 142 GVTKQEAKQLAAKEAYQKLLKSPPKTAGTSSSVVTSTFSGFSSSSSMTSNGVSQSAPGSF 201

Query: 247 DSRNHLSPNRGKNQRNKGISI 309
            S N  +   G+N+R  G+ +
Sbjct: 202 SSENVFTNGLGENKRKSGVKV 222



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>ANR11_HUMAN (Q6UB99) Ankyrin repeat domain-containing protein 11 (Ankyrin|
           repeat-containing cofactor 1)
          Length = 2664

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 23/86 (26%), Positives = 40/86 (46%)
 Frame = +1

Query: 40  GLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDSTAVNG 219
           G P  + ++VAL + +T EESA+   D    + P +  + +  +    ++ S     VN 
Sbjct: 109 GYPLSERQQVALLMQMTAEESANSPVD----TTPKHPSQSTVCQKGTPNSASKTKDKVN- 163

Query: 220 IHSKINNLPDSRNHLSPNRGKNQRNK 297
              K N   ++R H +  RG  +R K
Sbjct: 164 ---KRNERGETRLHRAAIRGDARRIK 186



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>PYRF_BACHD (Q9K9W2) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP|
           decarboxylase) (OMPDCase) (OMPdecase)
          Length = 234

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -3

Query: 206 VESVENADELLASIEETLFPFVGLELSKWSGPS 108
           VE+ +N  ELL ++ + LF  VG+EL    GP+
Sbjct: 11  VENRQNMQELLKTLPKPLFVKVGMELFYSEGPA 43



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>KIC1_YEAST (P38692) Serine/threonine-protein kinase KIC1 (EC 2.7.11.1) (Kinase|
           that interacts with CDC31) (N-rich kinase 1)
          Length = 1080

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = +1

Query: 49  SKQAEEVALKVGLTLEESAS--DGPDHLDSSRPTNGKRVSSMEANNSSAFSTDSTAVNGI 222
           SK+ E  A K  L L E        + +++  P   K +SS+ A NSS      +  N +
Sbjct: 472 SKRLESKAPKQLLELFEDNEIITAENDVNTEAPKISKSISSLNAGNSSRDDFIPSISNEV 531

Query: 223 HSKINNLPDSRNHLSP 270
           +  INN    R HL P
Sbjct: 532 NGNINN-NKMRPHLPP 546



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>SYA_METMA (Q8PWU0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 926

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +1

Query: 7   LNDETTIDDSDGLPSKQAEEVALKVGLTLE 96
           L+  T + DS G+P + A+EVA ++G+ +E
Sbjct: 446 LSQLTELYDSHGIPPEMAKEVAAEIGVGVE 475



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>SIR2_KLULA (P33294) NAD-dependent histone deacetylase SIR2 (EC 3.5.1.-)|
           (Regulatory protein SIR2) (Silent information regulator
           2)
          Length = 670

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 21/83 (25%), Positives = 33/83 (39%)
 Frame = +1

Query: 13  DETTIDDSDGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAF 192
           +ET  D+ D +  +  E+   +V      +ASD      S+  +     SS + N+ S  
Sbjct: 76  EETKADELDEVVDEYEEK---EVSSNFNGTASDHVGITSSNTGSTALAASSADTNSGSGN 132

Query: 193 STDSTAVNGIHSKINNLPDSRNH 261
            T + A NG  S     P    H
Sbjct: 133 GTGTMATNGTLSDRQYAPQKPEH 155



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>RAD50_HALSA (Q9HRW3) DNA double-strand break repair rad50 ATPase|
          Length = 883

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 171 LHRGDSLSIRRSRTVQMVWPI*STLFQG*ANLQCHFFGLLRW*AITVINCGFV 13
           +HR    S  R++T   V    +    G  +++ H  GLLR  A   +NC +V
Sbjct: 83  VHRRIRASGGRAQTAACVLETPTDRIDGVTDVEAHISGLLRMDAEAFVNCAYV 135



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>PYRF_STAS1 (Q49WY5) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP|
           decarboxylase) (OMPDCase) (OMPdecase)
          Length = 230

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 203 ESVENADELLASIEETLFPFVGLELSKWSGPSEALSSKVR 84
           +S E  D+ L    E LF  +G+EL   +GP    S K R
Sbjct: 12  DSTEAVDQFLDQFNEPLFVKIGMELFYQTGPQLIASIKDR 51



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>ZN592_HUMAN (Q92610) Zinc finger protein 592|
          Length = 1267

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +1

Query: 7   LNDETTIDDSDGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSS 186
           +++  ++  S   P   A  V +K   + +ES     DH+  S   NG R S +  +  +
Sbjct: 48  MDESVSLSHSGSAPDVPAVSVIVK-NTSRQESFEAEKDHITPSLLHNGFRGSDLPPDPHN 106

Query: 187 AFSTDSTAVNG 219
               DST +NG
Sbjct: 107 CGKFDSTFMNG 117



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>BET1_SCHPO (O13932) Protein transport protein bet1|
          Length = 117

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
 Frame = +1

Query: 106 SDGPDHLDSSRPTNGKRVSSMEANNSSA------FSTDSTAVNGIHSKINNLPDSRNHL- 264
           S  P HLDS    N +R+S +     S         T+ T+   +   +N+  DS   L 
Sbjct: 21  SQSPQHLDSLENENDERISKLTGKVKSLKELTMNIGTEITSSTKLMESMNDSFDSTKSLL 80

Query: 265 --SPNRGKN-QRNKGISI 309
             +  R KN  +N GISI
Sbjct: 81  SGTMTRLKNVSKNGGISI 98



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>Y059_NPVOP (O10316) Hypothetical 19.9 kDa protein (ORF62)|
          Length = 176

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
 Frame = +1

Query: 25  IDDSDGLPSKQAEEVALKVGLTLEESASDGPDHL---DSSRPTNGKRVSSMEANNSSAFS 195
           ++D   +P + A E+ ++  ++   S SDGP      D +RP   KR  S  +++SSA S
Sbjct: 55  VNDLQWIPRRAAYEI-IRDDMS---SDSDGPAASPPGDHARPNRDKRRVSYSSSDSSARS 110

Query: 196 TDSTAVN--GIHSKINNLPDSRNHL 264
           +D   ++  G   ++ +   S +HL
Sbjct: 111 SDDQLISARGSDDQLISTRSSDDHL 135



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>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)|
            (SMART/HDAC1-associated repressor protein)
          Length = 3664

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 61   EEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEAN 177
            +E A+      E S+ D P +LD+  PT G   S  E+N
Sbjct: 1710 KEAAMMPAGVEEGSSGDQPPYLDAKPPTPGASFSQAESN 1748



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>HIS8_LISIN (Q92A83) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 360

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +1

Query: 46  PSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNS 183
           P K+ EEV  ++GLT     S   + L +S     K+V++++AN+S
Sbjct: 15  PGKREEEVMAELGLTKITKLSSNENPLGTS-----KKVAAIQANSS 55



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>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 42)
           (Ubiquitin-specific-processing protease 42)
           (Deubiquitinating enzyme 42)
          Length = 1325

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 17/71 (23%), Positives = 31/71 (43%)
 Frame = +1

Query: 79  VGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDSTAVNGIHSKINNLPDSRN 258
           +G  L       P HL+ + P      SSM + N ++    ++ VN   + + N   +R+
Sbjct: 452 IGPQLPSHMIKNPPHLNGTGPLKDTPSSSMSSPNGNSSVNRASPVNA-SASVQNWSVNRS 510

Query: 259 HLSPNRGKNQR 291
            + P   K Q+
Sbjct: 511 SVIPEHPKKQK 521



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>FBW1B_HUMAN (Q9UKB1) F-box/WD-repeat protein 11 (F-box/WD-repeat protein 1B)|
           (F-box and WD-repeats protein beta-TrCP2)
          Length = 542

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 92  WKRVLQMGQTIWTVLDLRMERESPLWR 172
           W+RV+  G  +W  L  RM R  PLW+
Sbjct: 154 WQRVISEGM-LWKKLIERMVRTDPLWK 179



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>SMG1_HUMAN (Q96Q15) Serine/threonine-protein kinase SMG1 (EC 2.7.11.1) (SMG-1)|
           (hSMG-1) (Lambda/iota protein kinase C-interacting
           protein) (Lambda-interacting protein) (61E3.4)
          Length = 3657

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = +1

Query: 97  ESASDGPDHL--DSSRPTNGKRVSSMEANNSSAFSTDSTAVNGIHSKINNLPDSRNHLSP 270
           +SAS  P +L   SSR   G     ++ +NS+  S        +H+ I N  D +   S 
Sbjct: 29  DSASADPGNLKYSSSRDRGGSSSYGLQPSNSAVVSRQRHDDTRVHADIQN--DEKGGYSV 86

Query: 271 NRGKNQRNKG 300
           N G  +   G
Sbjct: 87  NGGSGENTYG 96



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>SYA_METAC (Q8TU79) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 925

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 7   LNDETTIDDSDGLPSKQAEEVALKVGLTLE 96
           L+  T + DS G+P + A+EVA  +G+ +E
Sbjct: 446 LSQLTELYDSHGIPPEMAKEVAADIGVGVE 475


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.301    0.122    0.323 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,671,544
Number of Sequences: 219361
Number of extensions: 799364
Number of successful extensions: 1421
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
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