Clone Name | bastl24g05 |
---|---|
Clone Library Name | barley_pub |
>NDRG1_MOUSE (Q62433) Protein NDRG1 (N-myc downstream-regulated gene 1 protein)| (Protein Ndr1) Length = 394 Score = 31.2 bits (69), Expect = 0.68 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Frame = +1 Query: 46 PSKQAEEVALKV-GLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTD-----ST 207 P+K AE V G+ SAS L SR +G V+S+E S + +++ S Sbjct: 298 PAKLAEAFKYFVQGMGYMPSAS--MTRLMRSRTASGSSVTSLEGTRSRSHTSEGPRSRSH 355 Query: 208 AVNGIHSKINNLPDSRNHLSPNRGKNQRNKG 300 G S+ + D+R +++PN G N G Sbjct: 356 TSEGSRSRSHTSEDARLNITPNSGATGNNAG 386
>TRFL_CAMDR (Q9TUM0) Lactotransferrin precursor (EC 3.4.21.-) (Lactoferrin)| Length = 708 Score = 31.2 bits (69), Expect = 0.68 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -3 Query: 122 WSGPSEALSSKVRPTFSATSSACLDGK 42 W+GP E L V FSA+ C+DGK Sbjct: 157 WTGPPEPLQKAVAKFFSASCVPCVDGK 183
>YXBA_BACSU (P46325) Hypothetical protein yxbA| Length = 89 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = +1 Query: 7 LNDETTIDDSDGLPS-KQAEEVALKVGLTLEESASDGPDHLD 129 +N+ T + + +PS K + + ++ G+TL E ASD +H+D Sbjct: 2 INESTVLSKNPEMPSRKYLKSIIIEPGITLNEMASDIYNHID 43
>TRFL_HORSE (O77811) Lactotransferrin precursor (EC 3.4.21.-) (Lactoferrin)| (Fragment) Length = 695 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -3 Query: 158 TLFPFVGLELSKWSGPSEALSSKVRPTFSATSSACLDGK 42 TL P++ W+GP E L V FSA+ C DGK Sbjct: 137 TLRPYLN-----WTGPPEPLQKAVANFFSASCVPCADGK 170
>WTF23_SCHPO (O94409) Hypothetical protein wtf23| Length = 368 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = +1 Query: 37 DGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDST 207 D L +K E+ L+ G E ++ DG S N K M ANN + F+TD + Sbjct: 13 DELSAKNDNEIDLEKGPLPEYNSEDGSTLPPYSENINLKDPKQMGANNPNLFNTDES 69
>WTF19_SCHPO (O74486) Hypothetical protein wtf19| Length = 393 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = +1 Query: 37 DGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDST 207 D L +K E+ L+ G E ++ DG S N K M ANN + F+TD + Sbjct: 13 DELSAKNDNEIDLEKGPLPEYNSEDGSTLPPYSENINLKDPKQMGANNPNLFNTDES 69
>MFAP3_RAT (Q6AYF7) Microfibril-associated glycoprotein 3 precursor| Length = 347 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +1 Query: 28 DDSDGLPSKQAEEVALKVGLTLE-ESASDGPDHLDSS 135 D DG S+Q +E+A++V + L+ E+ S G D DSS Sbjct: 292 DSDDGSLSEQGQEIAVQVSVHLQSETKSIGTDSQDSS 328
>MFAP3_MOUSE (Q922T2) Microfibril-associated glycoprotein 3 precursor| Length = 349 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +1 Query: 28 DDSDGLPSKQAEEVALKVGLTLE-ESASDGPDHLDSS 135 D DG S+Q +E+A++V + L+ E+ S G D DSS Sbjct: 292 DSDDGSLSEQGQEIAVQVSVHLQSETKSIGTDSQDSS 328
>YMJB_CAEEL (P34487) Hypothetical protein F59B2.12| Length = 918 Score = 28.9 bits (63), Expect = 3.4 Identities = 23/92 (25%), Positives = 40/92 (43%) Frame = +1 Query: 7 LNDETTIDDSDGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSS 186 + +T + +D +A + A G E+ +G L+ S +G++ S NN++ Sbjct: 362 IKSHSTSNKTDNYALDEANQSA---GSISEQIGKNGQRSLNESSIESGRKAESR--NNTA 416 Query: 187 AFSTDSTAVNGIHSKINNLPDSRNHLSPNRGK 282 A + DS NG S ++ S L N K Sbjct: 417 ADTLDSVDANGTVSSSHSKSASGTSLDENHNK 448
>CWC15_SCHPO (P78794) Pre-mRNA-splicing factor cwc15 (Complexed with cdc5| protein 15) (Cell cycle control protein cwf15) Length = 265 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Frame = +1 Query: 4 RLNDETTIDDSDGLPSKQAE---EVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEA 174 +L + T +D P+ E + L+ L +E ASD D +DSS + + + Sbjct: 82 KLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKT 141 Query: 175 NNSSAFSTDST 207 ++S S DS+ Sbjct: 142 ESNSQESVDSS 152
>ZN592_MOUSE (Q8BHZ4) Zinc finger protein 592 (Zfp-592)| Length = 1262 Score = 28.5 bits (62), Expect = 4.4 Identities = 19/71 (26%), Positives = 32/71 (45%) Frame = +1 Query: 7 LNDETTIDDSDGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSS 186 +++ ++ S P A V +K + +ES DH+ S NG R S + ++ Sbjct: 48 IDENVSLSHSGSAPDVPAVSVIVK-NTSRQESFEAEKDHIAPSLLHNGFRGSDLPPDSHH 106 Query: 187 AFSTDSTAVNG 219 DST +NG Sbjct: 107 CGKFDSTFING 117
>SEN2_NEUCR (Q9P6Y2) Probable tRNA-splicing endonuclease subunit sen-2 (EC| 3.1.27.9) (tRNA-intron endonuclease sen-2) Length = 633 Score = 28.1 bits (61), Expect = 5.7 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 7/101 (6%) Frame = +1 Query: 43 LPSKQAEEVALKVGLTLEESA------SDGPDHLDSSRPTNGK-RVSSMEANNSSAFSTD 201 LP+ + VAL V L E A S D L++S TN + S+ EAN+S++ S+ Sbjct: 301 LPNSLVDLVALSVVSVLSEDAGVDEDESSTEDQLEASALTNDEPETSATEANDSTSSSSP 360 Query: 202 STAVNGIHSKINNLPDSRNHLSPNRGKNQRNKGISIISYTE 324 + LPDS+ +R K + S E Sbjct: 361 --------PHTDGLPDSQPTQENVPATPERRKSVRFSSTVE 393
>MCM4_SCHPO (P29458) DNA replication licensing factor mcm4 (Minichromosome| maintenance protein 4) (Cell division control protein 21) Length = 931 Score = 28.1 bits (61), Expect = 5.7 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +1 Query: 91 LEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDSTAVNGIHSKIN-NLPDSRNHLS 267 L ES+S GP+ SSR + + + ++SS + ST IHS + + P R + Sbjct: 61 LFESSSPGPNIPQSSRSHLLSQRNDLFLDSSSQRTPRSTRRGDIHSSVQMSTPSRRREVD 120 Query: 268 PNR 276 P R Sbjct: 121 PQR 123
>CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 935 Score = 28.1 bits (61), Expect = 5.7 Identities = 23/96 (23%), Positives = 40/96 (41%) Frame = +1 Query: 10 NDETTIDDSDGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSA 189 +D + DSD +E + + +SASD DS ++ S+ + + + Sbjct: 797 SDSDSESDSDSDSDSDSESDSDSDSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDND 856 Query: 190 FSTDSTAVNGIHSKINNLPDSRNHLSPNRGKNQRNK 297 +DS + + S N +P + SP G N NK Sbjct: 857 SDSDSNSDSESGSNNNVVPPN----SPKNGTNASNK 888
>ROK1_ASPOR (Q2UQW3) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)| Length = 725 Score = 28.1 bits (61), Expect = 5.7 Identities = 21/74 (28%), Positives = 25/74 (33%) Frame = +1 Query: 85 LTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDSTAVNGIHSKINNLPDSRNHL 264 LT GP +S P+ GK + NS A NG K + D Sbjct: 7 LTRSTKFKTGPSSSSASLPSTGKAENPQLFRNSEAEKLLEEQKNGKKRKRGSAADEPEER 66 Query: 265 SPNRGKNQRNKGIS 306 PN NKG S Sbjct: 67 EPNLDFFSSNKGSS 80
>EXBD_SYNY3 (P72942) Putative biopolymer transport exbD protein| Length = 269 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/47 (27%), Positives = 23/47 (48%) Frame = +1 Query: 145 NGKRVSSMEANNSSAFSTDSTAVNGIHSKINNLPDSRNHLSPNRGKN 285 NG NNS+ + + N ++ + +PD+ ++SPN G N Sbjct: 190 NGANPGMSNFNNSNPGGSGAGVPNFSNTPLPGMPDANGNVSPNPGMN 236
>CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 989 Score = 28.1 bits (61), Expect = 5.7 Identities = 23/96 (23%), Positives = 40/96 (41%) Frame = +1 Query: 10 NDETTIDDSDGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSA 189 +D + DSD +E + + +SASD DS ++ S+ + + + Sbjct: 851 SDSDSESDSDSDSDSDSESDSDSDSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDND 910 Query: 190 FSTDSTAVNGIHSKINNLPDSRNHLSPNRGKNQRNK 297 +DS + + S N +P + SP G N NK Sbjct: 911 SDSDSNSDSESGSNNNVVPPN----SPKNGTNASNK 942
>E2AK2_MOUSE (Q03963) Interferon-induced, double-stranded RNA-activated protein| kinase (EC 2.7.11.1) (Interferon-inducible RNA-dependent protein kinase) (Protein kinase RNA-activated) (PKR) (p68 kinase) (P1/eIF-2A protein kinase) (Serine/threonine-protein Length = 515 Score = 28.1 bits (61), Expect = 5.7 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%) Frame = +1 Query: 82 GLTLEES----ASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDSTAV-NGIHSKINNLP 246 G+T +E+ A + L S P SS+ + S FS+ S+ NG+ Sbjct: 142 GVTKQEAKQLAAKEAYQKLLKSPPKTAGTSSSVVTSTFSGFSSSSSMTSNGVSQSAPGSF 201 Query: 247 DSRNHLSPNRGKNQRNKGISI 309 S N + G+N+R G+ + Sbjct: 202 SSENVFTNGLGENKRKSGVKV 222
>ANR11_HUMAN (Q6UB99) Ankyrin repeat domain-containing protein 11 (Ankyrin| repeat-containing cofactor 1) Length = 2664 Score = 28.1 bits (61), Expect = 5.7 Identities = 23/86 (26%), Positives = 40/86 (46%) Frame = +1 Query: 40 GLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDSTAVNG 219 G P + ++VAL + +T EESA+ D + P + + + + ++ S VN Sbjct: 109 GYPLSERQQVALLMQMTAEESANSPVD----TTPKHPSQSTVCQKGTPNSASKTKDKVN- 163 Query: 220 IHSKINNLPDSRNHLSPNRGKNQRNK 297 K N ++R H + RG +R K Sbjct: 164 ---KRNERGETRLHRAAIRGDARRIK 186
>PYRF_BACHD (Q9K9W2) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP| decarboxylase) (OMPDCase) (OMPdecase) Length = 234 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 206 VESVENADELLASIEETLFPFVGLELSKWSGPS 108 VE+ +N ELL ++ + LF VG+EL GP+ Sbjct: 11 VENRQNMQELLKTLPKPLFVKVGMELFYSEGPA 43
>KIC1_YEAST (P38692) Serine/threonine-protein kinase KIC1 (EC 2.7.11.1) (Kinase| that interacts with CDC31) (N-rich kinase 1) Length = 1080 Score = 28.1 bits (61), Expect = 5.7 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Frame = +1 Query: 49 SKQAEEVALKVGLTLEESAS--DGPDHLDSSRPTNGKRVSSMEANNSSAFSTDSTAVNGI 222 SK+ E A K L L E + +++ P K +SS+ A NSS + N + Sbjct: 472 SKRLESKAPKQLLELFEDNEIITAENDVNTEAPKISKSISSLNAGNSSRDDFIPSISNEV 531 Query: 223 HSKINNLPDSRNHLSP 270 + INN R HL P Sbjct: 532 NGNINN-NKMRPHLPP 546
>SYA_METMA (Q8PWU0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 926 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 7 LNDETTIDDSDGLPSKQAEEVALKVGLTLE 96 L+ T + DS G+P + A+EVA ++G+ +E Sbjct: 446 LSQLTELYDSHGIPPEMAKEVAAEIGVGVE 475
>SIR2_KLULA (P33294) NAD-dependent histone deacetylase SIR2 (EC 3.5.1.-)| (Regulatory protein SIR2) (Silent information regulator 2) Length = 670 Score = 27.7 bits (60), Expect = 7.5 Identities = 21/83 (25%), Positives = 33/83 (39%) Frame = +1 Query: 13 DETTIDDSDGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAF 192 +ET D+ D + + E+ +V +ASD S+ + SS + N+ S Sbjct: 76 EETKADELDEVVDEYEEK---EVSSNFNGTASDHVGITSSNTGSTALAASSADTNSGSGN 132 Query: 193 STDSTAVNGIHSKINNLPDSRNH 261 T + A NG S P H Sbjct: 133 GTGTMATNGTLSDRQYAPQKPEH 155
>RAD50_HALSA (Q9HRW3) DNA double-strand break repair rad50 ATPase| Length = 883 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = -2 Query: 171 LHRGDSLSIRRSRTVQMVWPI*STLFQG*ANLQCHFFGLLRW*AITVINCGFV 13 +HR S R++T V + G +++ H GLLR A +NC +V Sbjct: 83 VHRRIRASGGRAQTAACVLETPTDRIDGVTDVEAHISGLLRMDAEAFVNCAYV 135
>PYRF_STAS1 (Q49WY5) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP| decarboxylase) (OMPDCase) (OMPdecase) Length = 230 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -3 Query: 203 ESVENADELLASIEETLFPFVGLELSKWSGPSEALSSKVR 84 +S E D+ L E LF +G+EL +GP S K R Sbjct: 12 DSTEAVDQFLDQFNEPLFVKIGMELFYQTGPQLIASIKDR 51
>ZN592_HUMAN (Q92610) Zinc finger protein 592| Length = 1267 Score = 27.7 bits (60), Expect = 7.5 Identities = 19/71 (26%), Positives = 32/71 (45%) Frame = +1 Query: 7 LNDETTIDDSDGLPSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSS 186 +++ ++ S P A V +K + +ES DH+ S NG R S + + + Sbjct: 48 MDESVSLSHSGSAPDVPAVSVIVK-NTSRQESFEAEKDHITPSLLHNGFRGSDLPPDPHN 106 Query: 187 AFSTDSTAVNG 219 DST +NG Sbjct: 107 CGKFDSTFMNG 117
>BET1_SCHPO (O13932) Protein transport protein bet1| Length = 117 Score = 27.7 bits (60), Expect = 7.5 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 10/78 (12%) Frame = +1 Query: 106 SDGPDHLDSSRPTNGKRVSSMEANNSSA------FSTDSTAVNGIHSKINNLPDSRNHL- 264 S P HLDS N +R+S + S T+ T+ + +N+ DS L Sbjct: 21 SQSPQHLDSLENENDERISKLTGKVKSLKELTMNIGTEITSSTKLMESMNDSFDSTKSLL 80 Query: 265 --SPNRGKN-QRNKGISI 309 + R KN +N GISI Sbjct: 81 SGTMTRLKNVSKNGGISI 98
>Y059_NPVOP (O10316) Hypothetical 19.9 kDa protein (ORF62)| Length = 176 Score = 27.7 bits (60), Expect = 7.5 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Frame = +1 Query: 25 IDDSDGLPSKQAEEVALKVGLTLEESASDGPDHL---DSSRPTNGKRVSSMEANNSSAFS 195 ++D +P + A E+ ++ ++ S SDGP D +RP KR S +++SSA S Sbjct: 55 VNDLQWIPRRAAYEI-IRDDMS---SDSDGPAASPPGDHARPNRDKRRVSYSSSDSSARS 110 Query: 196 TDSTAVN--GIHSKINNLPDSRNHL 264 +D ++ G ++ + S +HL Sbjct: 111 SDDQLISARGSDDQLISTRSSDDHL 135
>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3664 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 61 EEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEAN 177 +E A+ E S+ D P +LD+ PT G S E+N Sbjct: 1710 KEAAMMPAGVEEGSSGDQPPYLDAKPPTPGASFSQAESN 1748
>HIS8_LISIN (Q92A83) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 360 Score = 27.3 bits (59), Expect = 9.8 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +1 Query: 46 PSKQAEEVALKVGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNS 183 P K+ EEV ++GLT S + L +S K+V++++AN+S Sbjct: 15 PGKREEEVMAELGLTKITKLSSNENPLGTS-----KKVAAIQANSS 55
>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)| (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42) Length = 1325 Score = 27.3 bits (59), Expect = 9.8 Identities = 17/71 (23%), Positives = 31/71 (43%) Frame = +1 Query: 79 VGLTLEESASDGPDHLDSSRPTNGKRVSSMEANNSSAFSTDSTAVNGIHSKINNLPDSRN 258 +G L P HL+ + P SSM + N ++ ++ VN + + N +R+ Sbjct: 452 IGPQLPSHMIKNPPHLNGTGPLKDTPSSSMSSPNGNSSVNRASPVNA-SASVQNWSVNRS 510 Query: 259 HLSPNRGKNQR 291 + P K Q+ Sbjct: 511 SVIPEHPKKQK 521
>FBW1B_HUMAN (Q9UKB1) F-box/WD-repeat protein 11 (F-box/WD-repeat protein 1B)| (F-box and WD-repeats protein beta-TrCP2) Length = 542 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 Query: 92 WKRVLQMGQTIWTVLDLRMERESPLWR 172 W+RV+ G +W L RM R PLW+ Sbjct: 154 WQRVISEGM-LWKKLIERMVRTDPLWK 179
>SMG1_HUMAN (Q96Q15) Serine/threonine-protein kinase SMG1 (EC 2.7.11.1) (SMG-1)| (hSMG-1) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein) (61E3.4) Length = 3657 Score = 27.3 bits (59), Expect = 9.8 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = +1 Query: 97 ESASDGPDHL--DSSRPTNGKRVSSMEANNSSAFSTDSTAVNGIHSKINNLPDSRNHLSP 270 +SAS P +L SSR G ++ +NS+ S +H+ I N D + S Sbjct: 29 DSASADPGNLKYSSSRDRGGSSSYGLQPSNSAVVSRQRHDDTRVHADIQN--DEKGGYSV 86 Query: 271 NRGKNQRNKG 300 N G + G Sbjct: 87 NGGSGENTYG 96
>SYA_METAC (Q8TU79) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 925 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +1 Query: 7 LNDETTIDDSDGLPSKQAEEVALKVGLTLE 96 L+ T + DS G+P + A+EVA +G+ +E Sbjct: 446 LSQLTELYDSHGIPPEMAKEVAADIGVGVE 475 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.301 0.122 0.323 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,671,544 Number of Sequences: 219361 Number of extensions: 799364 Number of successful extensions: 1421 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 1390 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1418 length of database: 80,573,946 effective HSP length: 85 effective length of database: 61,928,261 effective search space used: 1486278264 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.7 bits)