ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl24g04 |
|---|---|
| Clone Library Name | barley_pub |
>YLA4_CAEEL (Q05036) Hypothetical protein C30C11.4 in chromosome III| Length = 776 Score = 41.6 bits (96), Expect = 5e-04 Identities = 17/26 (65%), Positives = 23/26 (88%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSV+GFD+GN +C +GVARQ GI+V+ Sbjct: 1 MSVLGFDIGNLNCYIGVARQGGIEVI 26
>HSP74_HUMAN (P34932) Heat shock 70 kDa protein 4 (Heat shock 70-related protein| APG-2) (HSP70RY) Length = 840 Score = 35.0 bits (79), Expect = 0.050 Identities = 16/26 (61%), Positives = 19/26 (73%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSVVG DLG +SC V VAR GI+ + Sbjct: 1 MSVVGIDLGFQSCYVAVARAGGIETI 26
>HS105_RAT (Q66HA8) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSVVG D+G++SC + VAR GI+ + Sbjct: 1 MSVVGLDVGSQSCYIAVARAGGIETI 26
>HS105_PONPY (Q5R606) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSVVG D+G++SC + VAR GI+ + Sbjct: 1 MSVVGLDVGSQSCYIAVARAGGIETI 26
>HS105_MOUSE (Q61699) Heat-shock protein 105 kDa (Heat shock-related 100 kDa| protein E7I) (HSP-E7I) (Heat shock 110 kDa protein) (42 degrees C-HSP) Length = 858 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSVVG D+G++SC + VAR GI+ + Sbjct: 1 MSVVGLDVGSQSCYIAVARAGGIETI 26
>HS105_HUMAN (Q92598) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| (Antigen NY-CO-25) Length = 858 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSVVG D+G++SC + VAR GI+ + Sbjct: 1 MSVVGLDVGSQSCYIAVARAGGIETI 26
>HS105_CRIGR (Q60446) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSVVG D+G++SC + VAR GI+ + Sbjct: 1 MSVVGLDVGSQSCYIAVARAGGIETI 26
>HSP74_MOUSE (Q61316) Heat shock 70 kDa protein 4 (Heat shock 70-related protein| APG-2) Length = 841 Score = 35.0 bits (79), Expect = 0.050 Identities = 16/26 (61%), Positives = 19/26 (73%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSVVG DLG +SC V VAR GI+ + Sbjct: 1 MSVVGIDLGFQSCYVAVARAGGIETI 26
>HSP7F_SCHPO (O59838) Heat shock protein homolog pss1| Length = 720 Score = 34.3 bits (77), Expect = 0.086 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 Query: 180 SEMSVVGFDLGNESCIVGVARQRGIDVVL 266 S +VVG D GN ++ VAR R IDV++ Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIV 31
>HSP7F_SACKL (Q875P5) Heat shock protein homolog SSE1| Length = 693 Score = 33.9 bits (76), Expect = 0.11 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = +3 Query: 198 GFDLGNESCIVGVARQRGIDVVL 266 G DLGN S ++ VAR RGID+++ Sbjct: 6 GLDLGNNSSVLAVARNRGIDIIV 28
>HSP88_NEUCR (O74225) Heat shock protein Hsp88| Length = 707 Score = 33.5 bits (75), Expect = 0.15 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSVVG D G + ++ VAR RG+DV+ Sbjct: 1 MSVVGVDFGALNTVIAVARNRGVDVI 26
>HSP79_YEAST (P32590) Heat shock protein homolog SSE2| Length = 692 Score = 33.5 bits (75), Expect = 0.15 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = +3 Query: 198 GFDLGNESCIVGVARQRGIDVVL 266 G DLGN + ++ VAR RGIDVV+ Sbjct: 5 GLDLGNNNSVLAVARNRGIDVVV 27
>HSP7F_YEAST (P32589) Heat shock protein homolog SSE1 (Chaperone protein MSI3)| Length = 692 Score = 33.1 bits (74), Expect = 0.19 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = +3 Query: 198 GFDLGNESCIVGVARQRGIDVVL 266 G DLGN + ++ VAR RGID+V+ Sbjct: 5 GLDLGNNNSVLAVARNRGIDIVV 27
>HSP7F_SACCA (Q875V0) Heat shock protein homolog SSE1| Length = 685 Score = 33.1 bits (74), Expect = 0.19 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = +3 Query: 198 GFDLGNESCIVGVARQRGIDVVL 266 G DLGN + ++ VAR RGID+V+ Sbjct: 6 GLDLGNNNSVLAVARNRGIDIVV 28
>HSP7F_ASHGO (Q74ZJ0) Heat shock protein homolog SSE1| Length = 697 Score = 32.7 bits (73), Expect = 0.25 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +3 Query: 198 GFDLGNESCIVGVARQRGIDVVL 266 G D GN S ++ VAR RGID+V+ Sbjct: 6 GLDFGNNSSVLAVARNRGIDIVV 28
>HSP97_STRPU (Q06068) 97 kDa heat shock protein (Egg sperm receptor)| Length = 889 Score = 32.3 bits (72), Expect = 0.33 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSVVGFD+GN S + VAR GI+ + Sbjct: 1 MSVVGFDVGNLSSYIAVARGGGIETM 26
>HSP7F_CANGA (Q6FJI3) Heat shock protein homolog SSE1| Length = 694 Score = 32.3 bits (72), Expect = 0.33 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = +3 Query: 198 GFDLGNESCIVGVARQRGIDVVL 266 G D GN++ ++ VAR RGID+V+ Sbjct: 6 GLDFGNDNSVLAVARNRGIDIVV 28
>HSP97_STRFN (Q94738) 97 kDa heat shock protein (Heat shock protein 110)| Length = 886 Score = 32.3 bits (72), Expect = 0.33 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSVVGFD+GN S + VAR GI+ + Sbjct: 1 MSVVGFDVGNLSSYIAVARGGGIETM 26
>HS74L_MOUSE (P48722) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)| (Heat shock 70-related protein APG-1) Length = 838 Score = 32.0 bits (71), Expect = 0.43 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSVVG DLG +C + VAR GI+ + Sbjct: 1 MSVVGIDLGFLNCYIAVARSGGIETI 26
>HS74L_HUMAN (O95757) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)| (Heat shock 70-related protein APG-1) Length = 839 Score = 32.0 bits (71), Expect = 0.43 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +3 Query: 186 MSVVGFDLGNESCIVGVARQRGIDVV 263 MSVVG DLG +C + VAR GI+ + Sbjct: 1 MSVVGIDLGFLNCYIAVARSGGIETI 26
>HSP7F_CANAL (Q96VB9) Heat shock protein homolog SSE1 (Chaperone protein MSI3)| Length = 702 Score = 30.4 bits (67), Expect = 1.2 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +3 Query: 198 GFDLGNESCIVGVARQRGIDVVL 266 G DLGN + ++ A+ RGID+V+ Sbjct: 6 GVDLGNNNTVIACAKNRGIDIVV 28
>LCE2A_HUMAN (Q5TA79) Late cornified envelope protein 2A (Late envelope protein| 9) Length = 106 Score = 29.6 bits (65), Expect = 2.1 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = -2 Query: 237 PPPQCSSHCPDQTPPHSSPT*PFYLPVTAGS 145 PPP+C CP + PP P P P S Sbjct: 12 PPPKCPPKCPPKCPPKCRPQCPAPCPPPVSS 42
>SEN54_HUMAN (Q7Z6J9) tRNA-splicing endonuclease subunit Sen54 (tRNA-intron| endonuclease Sen54) (HsSen54) Length = 526 Score = 29.3 bits (64), Expect = 2.8 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%) Frame = -2 Query: 246 AAGPPPQCS--SHCPDQTPPHSSP 181 AA PP CS S CP++ P SSP Sbjct: 227 AASSPPPCSQPSQCPEEKPQESSP 250
>ESR2_ANGJA (O13012) Estrogen receptor beta (ER-beta)| Length = 573 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = -2 Query: 240 GPPPQCSSHCPDQTPPHSSPT 178 GPPP CS CP PP S T Sbjct: 554 GPPPSCSGECP--CPPKESST 572
>GGLO_MOUSE (P58710) L-gulonolactone oxidase (EC 1.1.3.8) (LGO)| (L-gulono-gamma-lactone oxidase) (GLO) Length = 439 Score = 28.9 bits (63), Expect = 3.6 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = -3 Query: 86 LLELCFW*PPQLMRLVSWQQRFFPW 12 LLE W L RLV W RFF W Sbjct: 254 LLEFLLWTSTYLPRLVGWINRFFFW 278
>GAG_HTL1C (P14076) Gag polyprotein [Contains: Major core protein p19; Major| core protein p24; Nucleic acid-binding protein p15] Length = 429 Score = 28.9 bits (63), Expect = 3.6 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 5/34 (14%) Frame = -2 Query: 243 AGPPPQCSSHCPDQT-----PPHSSPT*PFYLPV 157 A PPP S+H P + PP+ PT P LPV Sbjct: 99 APPPPSSSTHDPPDSDPQIPPPYVEPTAPQVLPV 132
>MYFB_YEREN (P33407) Chaperone protein myfB precursor| Length = 267 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +3 Query: 42 QPHQLRRLPEAKLQKLLWHR 101 +P QLR+ PE KL+WHR Sbjct: 170 RPDQLRQKPEEMAGKLIWHR 189
>SPR2I_MOUSE (O70560) Small proline-rich protein 2I| Length = 76 Score = 28.1 bits (61), Expect = 6.1 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -2 Query: 237 PPPQCSSHCPDQTPPHS 187 PPP+C CP+ PP S Sbjct: 37 PPPKCPEPCPESCPPPS 53
>SPR2D_MOUSE (O70555) Small proline-rich protein 2D| Length = 85 Score = 27.7 bits (60), Expect = 8.0 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -2 Query: 237 PPPQCSSHCPDQTPPHS 187 PPP+C CP+ PP S Sbjct: 46 PPPKCPEPCPEPCPPPS 62
>MIPR_LYMST (Q25410) Putative molluscan insulin-related peptide(s) receptor| precursor (EC 2.7.10.1) [Contains: Putative molluscan insulin-related peptide(s) receptor alpha chain; Putative molluscan insulin-related peptide(s) receptor beta chain] Length = 1607 Score = 27.7 bits (60), Expect = 8.0 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +1 Query: 43 SLISCGGYQKQSSRSFSGTGNGLLTAGVVRDLDLRTSSD 159 SL CGG Q +SS F+G + L GV R+ L D Sbjct: 1360 SLTPCGGGQFKSSTHFNGGSHTLYDEGVDRETILNGVDD 1398
>HNF1B_XENLA (Q91910) Hepatocyte nuclear factor 1-beta (HNF-1B) (LFB3) (XLFB3)| Length = 561 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Frame = -3 Query: 251 STLPGHPHNA-ALIAQIKPHHT 189 ST P HPHN +L++ PHHT Sbjct: 318 STGPSHPHNLNSLLSHGSPHHT 339
>SPR2F_MOUSE (O70557) Small proline-rich protein 2F| Length = 76 Score = 27.7 bits (60), Expect = 8.0 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -2 Query: 237 PPPQCSSHCPDQTPPHS 187 PPP+C CP+ PP S Sbjct: 37 PPPKCPEPCPEPCPPPS 53
>SPR2E_MOUSE (O70556) Small proline-rich protein 2E| Length = 76 Score = 27.7 bits (60), Expect = 8.0 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -2 Query: 237 PPPQCSSHCPDQTPPHS 187 PPP+C CP+ PP S Sbjct: 37 PPPKCPEPCPEPCPPPS 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,582,169 Number of Sequences: 219361 Number of extensions: 731925 Number of successful extensions: 2929 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 2658 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2915 length of database: 80,573,946 effective HSP length: 64 effective length of database: 66,534,842 effective search space used: 1596836208 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
