Clone Name | bastl24g03 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK072121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122J23, full insert sequence Length = 3145 Score = 272 bits (137), Expect = 8e-70 Identities = 260/301 (86%) Strand = Plus / Plus Query: 104 atggctcaccggctgctgcacggcaccctccacgccaccatcttggaggccgacaacctc 163 |||||||||| ||||||||||||||| ||| | ||||||||| | ||||||||| ||||| Sbjct: 139 atggctcacctgctgctgcacggcacgctcgaggccaccatcctcgaggccgaccacctc 198 Query: 164 accaaccccgaccgcgccaccggcggcgccccccagatcttccgcaggttcgtggagggg 223 |||||||| |||||||||||||| ||||||| ||||||||||| ||||||||| ||| Sbjct: 199 tccaaccccacccgcgccaccggcgccgcccccgggatcttccgcaagttcgtggaaggg 258 Query: 224 ttcgaggagacgatcgggcgcggcaaggggtcgactcagctgtacgccaccgtcgacctc 283 |||||||| || | |||| ||| |||||| |||| | ||||||||| || |||||||| Sbjct: 259 ttcgaggactcgctggggctcgggaagggggcgacgcggctgtacgcgacgatcgacctc 318 Query: 284 ggcaaggcgcgcgtcggccggacgcgggtcatcgccggcgacccggtgaacccgcgctgg 343 ||| |||||| || || |||||||||||| ||| || ||| |||||||||||||| ||| Sbjct: 319 ggccgggcgcgggtggggcggacgcgggtcgtcgacgacgagccggtgaacccgcggtgg 378 Query: 344 tacgaggagttccacatctactgcgcccacttcgccgccgacgtcgtcttcaccgtcaag 403 ||||||| |||||||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 379 tacgaggtgttccacatctactgcgcccacttcgccgccgacgtggtgttctccgtcaag 438 Query: 404 g 404 | Sbjct: 439 g 439
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 170 bits (86), Expect = 2e-39 Identities = 167/194 (86%) Strand = Plus / Plus Query: 211 gttcgtggaggggttcgaggagacgatcgggcgcggcaaggggtcgactcagctgtacgc 270 ||||||||| ||||||||||| || | |||| ||| |||||| |||| | ||||||||| Sbjct: 23545436 gttcgtggaagggttcgaggactcgctggggctcgggaagggggcgacgcggctgtacgc 23545495 Query: 271 caccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccggcgacccggt 330 || ||||||||||| |||||| || || |||||||||||| ||| || ||| ||||| Sbjct: 23545496 gacgatcgacctcggccgggcgcgggtggggcggacgcgggtcgtcgacgacgagccggt 23545555 Query: 331 gaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgccgacgtcgt 390 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 23545556 gaacccgcggtggtacgaggtgttccacatctactgcgcccacttcgccgccgacgtggt 23545615 Query: 391 cttcaccgtcaagg 404 ||| ||||||||| Sbjct: 23545616 gttctccgtcaagg 23545629 Score = 141 bits (71), Expect = 2e-30 Identities = 125/143 (87%) Strand = Plus / Minus Query: 262 gctgtacgccaccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccgg 321 ||||||||| || || || |||||||||||||| ||||||||||||||||||||| || Sbjct: 23529811 gctgtacgcgacggtggatctcggcaaggcgcggctcggccggacgcgggtcatcgacga 23529752 Query: 322 cgacccggtgaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgc 381 ||| |||||||||||||| ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 23529751 cgagccggtgaacccgcggtgggacgagcgcttccacctctactgcgcccacttcgccga 23529692 Query: 382 cgacgtcgtcttcaccgtcaagg 404 | ||||||||||| ||||||||| Sbjct: 23529691 caacgtcgtcttctccgtcaagg 23529669 Score = 117 bits (59), Expect = 3e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 262 gctgtacgccaccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccgg 321 ||||||||| || || |||||||||| |||||| |||||||||||||||| |||| || Sbjct: 23538645 gctgtacgcgacggtggacctcggcagggcgcggctcggccggacgcgggtgatcgacga 23538704 Query: 322 cgacccggtgaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgc 381 ||| ||||||| |||||| ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 23538705 cgagccggtgagcccgcggtgggacgagcgcttccacttctactgcgcccacttcgccga 23538764 Query: 382 cgacgtcgtcttcaccgtcaagg 404 ||||||||||| ||||||||| Sbjct: 23538765 gaacgtcgtcttctccgtcaagg 23538787 Score = 107 bits (54), Expect = 3e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 104 atggctcaccggctgctgcacggcaccctccacgccaccatcttggaggccgacaacctc 163 |||||||||| ||||||||||||||| ||| | ||||||||| | ||||||||| ||||| Sbjct: 23545198 atggctcacctgctgctgcacggcacgctcgaggccaccatcctcgaggccgaccacctc 23545257 Query: 164 accaaccccgaccgcgccaccggcggcgccccccagatcttccgca 209 |||||||| |||||||||||||| ||||||| ||||||||||| Sbjct: 23545258 tccaaccccacccgcgccaccggcgccgcccccgggatcttccgca 23545303 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 98 gcagcaatggctcaccggctgctgcacggcaccctccacgccaccatcttggaggccgac 157 |||||||||||||||| |||| |||||||||| ||| ||||||||||||| |||||| | Sbjct: 23538361 gcagcaatggctcacctgctgatgcacggcacgctcgacgccaccatcttcgaggccacc 23538420 Query: 158 aacctcaccaaccccgaccgcgccaccggcggcgccccccagatcttccgca 209 ||||||||||||||| |||| ||||||| ||||||| || |||||||| Sbjct: 23538421 aacctcaccaaccccacccgcctcaccggcaacgcccccgagggcttccgca 23538472 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 115 gctgctgcacggcaccctccacgccaccatcttggaggccgacaacctcaccaaccccga 174 |||| |||| ||||||||| ||||||||||||| |||||| |||||||||||||||| Sbjct: 23530056 gctgatgcatggcaccctcgacgccaccatcttcgaggccaccaacctcaccaaccccac 23529997 Query: 175 ccgcgccaccggcggcgccccc 196 |||| ||||||| |||||||| Sbjct: 23529996 ccgcctcaccggcagcgccccc 23529975 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 343 gtacgaggagttccacatctactgcgcccacttcgc 378 ||||||||||||||||||||||| ||||||||||| Sbjct: 19095787 gtacgaggagttccacatctactcagcccacttcgc 19095752
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 170 bits (86), Expect = 2e-39 Identities = 167/194 (86%) Strand = Plus / Plus Query: 211 gttcgtggaggggttcgaggagacgatcgggcgcggcaaggggtcgactcagctgtacgc 270 ||||||||| ||||||||||| || | |||| ||| |||||| |||| | ||||||||| Sbjct: 26400 gttcgtggaagggttcgaggactcgctggggctcgggaagggggcgacgcggctgtacgc 26459 Query: 271 caccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccggcgacccggt 330 || ||||||||||| |||||| || || |||||||||||| ||| || ||| ||||| Sbjct: 26460 gacgatcgacctcggccgggcgcgggtggggcggacgcgggtcgtcgacgacgagccggt 26519 Query: 331 gaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgccgacgtcgt 390 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 26520 gaacccgcggtggtacgaggtgttccacatctactgcgcccacttcgccgccgacgtggt 26579 Query: 391 cttcaccgtcaagg 404 ||| ||||||||| Sbjct: 26580 gttctccgtcaagg 26593 Score = 141 bits (71), Expect = 2e-30 Identities = 125/143 (87%) Strand = Plus / Minus Query: 262 gctgtacgccaccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccgg 321 ||||||||| || || || |||||||||||||| ||||||||||||||||||||| || Sbjct: 10775 gctgtacgcgacggtggatctcggcaaggcgcggctcggccggacgcgggtcatcgacga 10716 Query: 322 cgacccggtgaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgc 381 ||| |||||||||||||| ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 10715 cgagccggtgaacccgcggtgggacgagcgcttccacctctactgcgcccacttcgccga 10656 Query: 382 cgacgtcgtcttcaccgtcaagg 404 | ||||||||||| ||||||||| Sbjct: 10655 caacgtcgtcttctccgtcaagg 10633 Score = 117 bits (59), Expect = 3e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 262 gctgtacgccaccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccgg 321 ||||||||| || || |||||||||| |||||| |||||||||||||||| |||| || Sbjct: 19609 gctgtacgcgacggtggacctcggcagggcgcggctcggccggacgcgggtgatcgacga 19668 Query: 322 cgacccggtgaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgc 381 ||| ||||||| |||||| ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 19669 cgagccggtgagcccgcggtgggacgagcgcttccacttctactgcgcccacttcgccga 19728 Query: 382 cgacgtcgtcttcaccgtcaagg 404 ||||||||||| ||||||||| Sbjct: 19729 gaacgtcgtcttctccgtcaagg 19751 Score = 107 bits (54), Expect = 3e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 104 atggctcaccggctgctgcacggcaccctccacgccaccatcttggaggccgacaacctc 163 |||||||||| ||||||||||||||| ||| | ||||||||| | ||||||||| ||||| Sbjct: 26162 atggctcacctgctgctgcacggcacgctcgaggccaccatcctcgaggccgaccacctc 26221 Query: 164 accaaccccgaccgcgccaccggcggcgccccccagatcttccgca 209 |||||||| |||||||||||||| ||||||| ||||||||||| Sbjct: 26222 tccaaccccacccgcgccaccggcgccgcccccgggatcttccgca 26267 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 98 gcagcaatggctcaccggctgctgcacggcaccctccacgccaccatcttggaggccgac 157 |||||||||||||||| |||| |||||||||| ||| ||||||||||||| |||||| | Sbjct: 19325 gcagcaatggctcacctgctgatgcacggcacgctcgacgccaccatcttcgaggccacc 19384 Query: 158 aacctcaccaaccccgaccgcgccaccggcggcgccccccagatcttccgca 209 ||||||||||||||| |||| ||||||| ||||||| || |||||||| Sbjct: 19385 aacctcaccaaccccacccgcctcaccggcaacgcccccgagggcttccgca 19436 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 115 gctgctgcacggcaccctccacgccaccatcttggaggccgacaacctcaccaaccccga 174 |||| |||| ||||||||| ||||||||||||| |||||| |||||||||||||||| Sbjct: 11020 gctgatgcatggcaccctcgacgccaccatcttcgaggccaccaacctcaccaaccccac 10961 Query: 175 ccgcgccaccggcggcgccccc 196 |||| ||||||| |||||||| Sbjct: 10960 ccgcctcaccggcagcgccccc 10939
>dbj|AB001919.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D, complete cds Length = 5169 Score = 170 bits (86), Expect = 2e-39 Identities = 167/194 (86%) Strand = Plus / Plus Query: 211 gttcgtggaggggttcgaggagacgatcgggcgcggcaaggggtcgactcagctgtacgc 270 ||||||||| ||||||||||| || | |||| ||| |||||| |||| | ||||||||| Sbjct: 2175 gttcgtggaagggttcgaggactcgctggggctcgggaagggggcgacgcggctgtacgc 2234 Query: 271 caccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccggcgacccggt 330 || ||||||||||| |||||| || || |||||||||||| ||| || ||| ||||| Sbjct: 2235 gacgatcgacctcggccgggcgcgggtggggcggacgcgggtcgtcgacgacgagccggt 2294 Query: 331 gaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgccgacgtcgt 390 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 2295 gaacccgcggtggtacgaggtgttccacatctactgcgcccacttcgccgccgacgtggt 2354 Query: 391 cttcaccgtcaagg 404 ||| ||||||||| Sbjct: 2355 gttctccgtcaagg 2368 Score = 107 bits (54), Expect = 3e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 104 atggctcaccggctgctgcacggcaccctccacgccaccatcttggaggccgacaacctc 163 |||||||||| ||||||||||||||| ||| | ||||||||| | ||||||||| ||||| Sbjct: 1937 atggctcacctgctgctgcacggcacgctcgaggccaccatcctcgaggccgaccacctc 1996 Query: 164 accaaccccgaccgcgccaccggcggcgccccccagatcttccgca 209 |||||||| |||||||||||||| ||||||| ||||||||||| Sbjct: 1997 tccaaccccacccgcgccaccggcgccgcccccgggatcttccgca 2042
>gb|AF271356.1| Oryza sativa (indica cultivar-group) phospholipase D (RPLD3) gene, complete cds Length = 6672 Score = 141 bits (71), Expect = 2e-30 Identities = 125/143 (87%) Strand = Plus / Plus Query: 262 gctgtacgccaccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccgg 321 ||||||||| || || || |||||||||||||| ||||||||||||||||||||| || Sbjct: 1876 gctgtacgcgacggtggatctcggcaaggcgcggctcggccggacgcgggtcatcgacga 1935 Query: 322 cgacccggtgaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgc 381 ||| |||||||||||||| ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 1936 cgagccggtgaacccgcggtgggacgagcgcttccacctctactgcgcccacttcgccga 1995 Query: 382 cgacgtcgtcttcaccgtcaagg 404 | ||||||||||| ||||||||| Sbjct: 1996 caacgtcgtcttctccgtcaagg 2018 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 115 gctgctgcacggcaccctccacgccaccatcttggaggccgacaacctcaccaaccccga 174 |||| |||| ||||||||| ||||||||||||| |||||| |||||||||||||||| Sbjct: 1631 gctgatgcatggcaccctcgacgccaccatcttcgaggccaccaacctcaccaaccccac 1690 Query: 175 ccgcgccaccggcggcgccccc 196 |||| ||||||| |||||||| Sbjct: 1691 ccgcctcaccggcagcgccccc 1712
>dbj|AK121264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D06, full insert sequence Length = 2762 Score = 141 bits (71), Expect = 2e-30 Identities = 125/143 (87%) Strand = Plus / Plus Query: 262 gctgtacgccaccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccgg 321 ||||||||| || || || |||||||||||||| ||||||||||||||||||||| || Sbjct: 237 gctgtacgcgacggtggatctcggcaaggcgcggctcggccggacgcgggtcatcgacga 296 Query: 322 cgacccggtgaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgc 381 ||| |||||||||||||| ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 297 cgagccggtgaacccgcggtgggacgagcgcttccacctctactgcgcccacttcgccga 356 Query: 382 cgacgtcgtcttcaccgtcaagg 404 | ||||||||||| ||||||||| Sbjct: 357 caacgtcgtcttctccgtcaagg 379 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 115 gctgctgcacggcaccctccacgccaccatcttggaggccgacaacctcaccaaccccga 174 |||| |||| ||||||||| ||||||||||||| |||||| |||||||||||||||| Sbjct: 90 gctgatgcatggcaccctcgacgccaccatcttcgaggccaccaacctcaccaaccccac 149 Query: 175 ccgcgccaccggcggcgccccc 196 |||| ||||||| |||||||| Sbjct: 150 ccgcctcaccggcagcgccccc 171
>dbj|AK100278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073L15, full insert sequence Length = 2821 Score = 141 bits (71), Expect = 2e-30 Identities = 125/143 (87%) Strand = Plus / Plus Query: 262 gctgtacgccaccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccgg 321 ||||||||| || || || |||||||||||||| ||||||||||||||||||||| || Sbjct: 237 gctgtacgcgacggtggatctcggcaaggcgcggctcggccggacgcgggtcatcgacga 296 Query: 322 cgacccggtgaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgc 381 ||| |||||||||||||| ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 297 cgagccggtgaacccgcggtgggacgagcgcttccacctctactgcgcccacttcgccga 356 Query: 382 cgacgtcgtcttcaccgtcaagg 404 | ||||||||||| ||||||||| Sbjct: 357 caacgtcgtcttctccgtcaagg 379 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 115 gctgctgcacggcaccctccacgccaccatcttggaggccgacaacctcaccaaccccga 174 |||| |||| ||||||||| ||||||||||||| |||||| |||||||||||||||| Sbjct: 90 gctgatgcatggcaccctcgacgccaccatcttcgaggccaccaacctcaccaaccccac 149 Query: 175 ccgcgccaccggcggcgccccc 196 |||| ||||||| |||||||| Sbjct: 150 ccgcctcaccggcagcgccccc 171
>gb|AF271357.1| Oryza sativa (indica cultivar-group) phospholipase D (RPLD4) gene, complete cds Length = 4740 Score = 117 bits (59), Expect = 3e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 262 gctgtacgccaccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccgg 321 ||||||||| || || |||||||||| |||||| |||||||||||||||| |||| || Sbjct: 1844 gctgtacgcgacggtggacctcggcagggcgcggctcggccggacgcgggtgatcgacga 1903 Query: 322 cgacccggtgaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgc 381 ||| ||||||| |||||| ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 1904 cgagccggtgagcccgcggtgggacgagcgcttccacttctactgcgcccacttcgccga 1963 Query: 382 cgacgtcgtcttcaccgtcaagg 404 ||||||||||| ||||||||| Sbjct: 1964 gaacgtcgtcttctccgtcaagg 1986 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 98 gcagcaatggctcaccggctgctgcacggcaccctccacgccaccatcttggaggccgac 157 |||||||||||||||| |||| |||||||||| ||| ||||||||||||| |||||| | Sbjct: 1560 gcagcaatggctcacctgctgatgcacggcacgctcgacgccaccatcttcgaggccacc 1619 Query: 158 aacctcaccaaccccgaccgcgccaccggcggcgccccccagatcttccgca 209 ||||||||||||||| |||| ||||||| ||||||| || |||||||| Sbjct: 1620 aacctcaccaaccccacccgcctcaccggcaacgcccccgagggcttccgca 1671
>dbj|AK119861.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-H08, full insert sequence Length = 2783 Score = 117 bits (59), Expect = 3e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 262 gctgtacgccaccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccgg 321 ||||||||| || || |||||||||| |||||| |||||||||||||||| |||| || Sbjct: 250 gctgtacgcgacggtggacctcggcagggcgcggctcggccggacgcgggtgatcgacga 309 Query: 322 cgacccggtgaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgc 381 ||| ||||||| |||||| ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 310 cgagccggtgagcccgcggtgggacgagcgcttccacttctactgcgcccacttcgccga 369 Query: 382 cgacgtcgtcttcaccgtcaagg 404 ||||||||||| ||||||||| Sbjct: 370 gaacgtcgtcttctccgtcaagg 392 Score = 103 bits (52), Expect = 4e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 98 gcagcaatggctcaccggctgctgcacggcaccctccacgccaccatcttggaggccgac 157 |||||||||||||||| |||| |||||||||| ||| ||||||||||||| |||||| | Sbjct: 74 gcagcaatggctcacctgctgatgcacggcacgctcgacgccaccatcttcgaggccacc 133 Query: 158 aacctcaccaaccccgaccgcgccaccggcggcgccccccagatcttccgca 209 ||||||||||||||| |||| |||||||| ||||||| || |||||||| Sbjct: 134 aacctcaccaaccccacccgccccaccggcaacgcccccgagggcttccgca 185
>dbj|D73410.1|MZEPHD1 Zea mays mRNA for phospholipase D, complete cds Length = 2793 Score = 117 bits (59), Expect = 3e-23 Identities = 230/287 (80%) Strand = Plus / Plus Query: 117 tgctgcacggcaccctccacgccaccatcttggaggccgacaacctcaccaaccccgacc 176 |||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||| Sbjct: 120 tgctccacggcacgctccacgccaccatcttcgaggccgagtcgctctccaacccgcacc 179 Query: 177 gcgccaccggcggcgccccccagatcttccgcaggttcgtggaggggttcgaggagacga 236 ||||||| |||||||||||| || || |||||| | | ||||| ||| ||||||| || Sbjct: 180 gcgccactggcggcgcccccaagttcatccgcaagcttgtggaagggatcgaggacaccg 239 Query: 237 tcgggcgcggcaaggggtcgactcagctgtacgccaccgtcgacctcggcaaggcgcgcg 296 | || ||||||||| | || || | || ||||||||||| |||| ||||| || | Sbjct: 240 tgggtgtcggcaagggcgccaccaagatatatgccaccgtcgatctcgagaaggcccgtg 299 Query: 297 tcggccggacgcgggtcatcgccggcgacccggtgaacccgcgctggtacgaggagttcc 356 |||| ||||| ||| | ||| || ||| || |||||||| || ||||||||| |||| Sbjct: 300 tcgggcggacccggatgatctccaacgagcccgtgaaccctcgttggtacgagtccttcc 359 Query: 357 acatctactgcgcccacttcgccgccgacgtcgtcttcaccgtcaag 403 ||||||||||||| ||| | |||||||||||| |||||||||||||| Sbjct: 360 acatctactgcgcgcacatggccgccgacgtcatcttcaccgtcaag 406
>gb|AY109642.1| Zea mays CL1830_1 mRNA sequence Length = 2876 Score = 85.7 bits (43), Expect = 1e-13 Identities = 112/135 (82%) Strand = Plus / Plus Query: 269 gccaccgtcgacctcggcaaggcgcgcgtcggccggacgcgggtcatcgccggcgacccg 328 ||||||||||| |||| ||||| || ||||| ||||| ||| | ||| || ||| || Sbjct: 272 gccaccgtcgatctcgagaaggcccgtgtcgggcggacccggatgatctccaacgagccc 331 Query: 329 gtgaacccgcgctggtacgaggagttccacatctactgcgcccacttcgccgccgacgtc 388 |||||||| || ||||||||| ||||||||||||||||| ||| | |||||||||||| Sbjct: 332 gtgaaccctcgttggtacgagtccttccacatctactgcgcgcacatggccgccgacgtc 391 Query: 389 gtcttcaccgtcaag 403 |||||||||||||| Sbjct: 392 atcttcaccgtcaag 406 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 117 tgctgcacggcaccctccacgccaccatcttggaggccgacaacctcaccaaccccgacc 176 |||| |||||||| ||||||||||||||||| |||||||| ||| ||||||| ||| Sbjct: 120 tgctccacggcacgctccacgccaccatcttcgaggccgagtcgctctccaacccgcacc 179 Query: 177 gcgccaccggcggcg 191 ||||||| ||||||| Sbjct: 180 gcgccactggcggcg 194
>ref|XM_470814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2556 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 352 gttccacatctactgcgcccacttcgccgccgacgtcgtcttcaccgtcaagg 404 |||||||||||||||||| |||| ||||| ||||||| ||||||||||||||| Sbjct: 297 gttccacatctactgcgcgcactacgccggcgacgtcatcttcaccgtcaagg 349
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 352 gttccacatctactgcgcccacttcgccgccgacgtcgtcttcaccgtcaagg 404 |||||||||||||||||| |||| ||||| ||||||| ||||||||||||||| Sbjct: 15514115 gttccacatctactgcgcgcactacgccggcgacgtcatcttcaccgtcaagg 15514167 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 acctcaccaaccccgaccgcgcca 182 ||||| |||||||||||||||||| Sbjct: 1224466 acctcgccaaccccgaccgcgcca 1224443
>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete sequence Length = 115079 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 352 gttccacatctactgcgcccacttcgccgccgacgtcgtcttcaccgtcaagg 404 |||||||||||||||||| |||| ||||| ||||||| ||||||||||||||| Sbjct: 13666 gttccacatctactgcgcgcactacgccggcgacgtcatcttcaccgtcaagg 13718
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 352 gttccacatctactgcgcccacttcgccgccgacgtcgtcttcaccgtcaagg 404 |||||||||||||||||| |||| ||||| ||||||| ||||||||||||||| Sbjct: 15508649 gttccacatctactgcgcgcactacgccggcgacgtcatcttcaccgtcaagg 15508701 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 acctcaccaaccccgaccgcgcca 182 ||||| |||||||||||||||||| Sbjct: 1224464 acctcgccaaccccgaccgcgcca 1224441
>dbj|AK109877.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C05, full insert sequence Length = 2303 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 352 gttccacatctactgcgcccacttcgccgccgacgtcgtcttcaccgtcaagg 404 |||||||||||||||||| |||| ||||| ||||||| ||||||||||||||| Sbjct: 1843 gttccacatctactgcgcgcactacgccggcgacgtcatcttcaccgtcaagg 1791
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 335 ccgcgctggtacgaggagttccacatctactgcgcccacttcgccgccgacgtcgtcttc 394 ||||||||||||||| |||||| |||||||||||||| ||||| || |||||| |||| Sbjct: 85792 ccgcgctggtacgagtccttccacgtctactgcgcccacctcgccacccacgtcgccttc 85733 Query: 395 accgtcaagg 404 ||| |||||| Sbjct: 85732 accctcaagg 85723 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Minus Query: 264 tgtacgccaccgtcgacctcggcaaggcgcgcgtcggccg 303 ||||||||||| ||| ||||| |||||| ||||||||||| Sbjct: 85863 tgtacgccaccatcggcctcgacaaggcccgcgtcggccg 85824
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 335 ccgcgctggtacgaggagttccacatctactgcgcccacttcgccgccgacgtcgtcttc 394 ||||||||||||||| |||||| |||||||||||||| ||||| || |||||| |||| Sbjct: 4199313 ccgcgctggtacgagtccttccacgtctactgcgcccacctcgccacccacgtcgccttc 4199254 Query: 395 accgtcaagg 404 ||| |||||| Sbjct: 4199253 accctcaagg 4199244 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Minus Query: 264 tgtacgccaccgtcgacctcggcaaggcgcgcgtcggccg 303 ||||||||||| ||| ||||| |||||| ||||||||||| Sbjct: 4199384 tgtacgccaccatcggcctcgacaaggcccgcgtcggccg 4199345 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 acgccaccgtcgacctcggcaagg 290 ||||| |||||||||||||||||| Sbjct: 29249987 acgccgccgtcgacctcggcaagg 29250010 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cgccaccggcggcgcccccc 197 |||||||||||||||||||| Sbjct: 9251949 cgccaccggcggcgcccccc 9251930
>gb|AF113918.1|AF113918 Brassica oleracea var. capitata phospholipase D1 (PLD1) gene, complete cds Length = 3404 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 356 cacatctactgcgcccacttcgccgccgacgtcgtcttcaccgtcaagg 404 |||||||||||||||||||| || ||||| || ||||||||||||||| Sbjct: 808 cacatctactgcgcccacttggcttccgacatcatcttcaccgtcaagg 856
>gb|AF090445.1|AF090445 Brassica oleracea phospholipase D1 (PLD1) mRNA, complete cds Length = 2793 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 356 cacatctactgcgcccacttcgccgccgacgtcgtcttcaccgtcaagg 404 |||||||||||||||||||| || ||||| || ||||||||||||||| Sbjct: 324 cacatctactgcgcccacttggcttccgacatcatcttcaccgtcaagg 372
>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1616_B03 Length = 96081 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 343 gtacgaggagttccacatctactgcgcccacttcgc 378 ||||||||||||||||||||||| ||||||||||| Sbjct: 93271 gtacgaggagttccacatctactcagcccacttcgc 93236
>gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full insert mRNA sequence Length = 2997 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 130 cctccacgccaccatcttggaggccgacaacctcaccaaccccgaccgcgccaccggcgg 189 |||||||| ||||||||| |||||| | ||| || |||||| |||||||| |||||| Sbjct: 157 cctccacgtcaccatcttcgaggcctcctcgctctcccaccccggccgcgccagcggcgg 216 Query: 190 cgccccccagatcttccgcaggttcgtggaggg 222 ||||||| || || |||||| ||| || ||||| Sbjct: 217 cgcccccaagttcatccgcaagtttgtagaggg 249 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 338 cgctggtacgaggagttccacatctactgcgcccacttcgccgccga 384 |||||||||||| ||||||||||||||| || ||| | |||||||| Sbjct: 365 cgctggtacgagtcgttccacatctactgtgcgcaccttgccgccga 411
>gb|AY792974.1| Triticum aestivum meiosis 5 (M5) mRNA, complete cds Length = 1248 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 cgaccgcgccaccggcggcgcc 193 |||||||||||||||||||||| Sbjct: 793 cgaccgcgccaccggcggcgcc 772
>emb|X05263.1|XBRRNSP Xenopus borealis ribosomal gene spacer (28S-40S rRNA precursor) Length = 4000 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 168 accccgaccgcgccaccggcggcgcccccc 197 |||||| |||||||||| |||||||||||| Sbjct: 2289 accccgcccgcgccacccgcggcgcccccc 2260 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 168 accccgaccgcgccaccggcggcgcccccc 197 |||||| |||||||||| |||||||||||| Sbjct: 2066 accccgcccgcgccacccgcggcgcccccc 2037 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 168 accccgaccgcgccaccggcggcgcccccc 197 |||||| |||||||||| |||||||||||| Sbjct: 1849 accccgcccgcgccacccgcggcgcccccc 1820 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 168 accccgaccgcgccaccggcggcgcccccc 197 |||||| |||||||||| |||||||||||| Sbjct: 1641 accccgcccgcgccacccgcggcgcccccc 1612
>ref|XM_512915.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ14768 (LOC456307), mRNA Length = 2086 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 caccggctgctgcacggcacc 130 ||||||||||||||||||||| Sbjct: 1333 caccggctgctgcacggcacc 1353
>ref|NM_196880.1| Oryza sativa (japonica cultivar-group) putative glycopeptide (OSJNBa0042E19.33), mRNA Length = 618 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tcgacctcggcaaggcgcgcg 296 ||||||||||||||||||||| Sbjct: 484 tcgacctcggcaaggcgcgcg 504
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 272 accgtcgacctcggcaaggcgcgcg 296 |||||| |||||||||||||||||| Sbjct: 127624 accgtcaacctcggcaaggcgcgcg 127648
>ref|NM_032836.1| Homo sapiens hypothetical protein FLJ14768 (FLJ14768), mRNA Length = 2651 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 caccggctgctgcacggcacc 130 ||||||||||||||||||||| Sbjct: 1468 caccggctgctgcacggcacc 1488
>gb|AC154227.2| Mus musculus BAC clone RP24-142A23 from chromosome 14, complete sequence Length = 156644 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 acttgggaggtggaggtgaga 90 ||||||||||||||||||||| Sbjct: 136242 acttgggaggtggaggtgaga 136262
>gb|AC145900.3| Pan troglodytes BAC clone RP43-40I9 from 7, complete sequence Length = 160229 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 acttgggaggtggaggtgaga 90 ||||||||||||||||||||| Sbjct: 41706 acttgggaggtggaggtgaga 41686
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 313 catcgccggcgacccggtgaacccgcgct 341 |||||| ||||||| |||||||||||||| Sbjct: 508691 catcgcaggcgacctggtgaacccgcgct 508663
>ref|XM_541407.2| PREDICTED: Canis familiaris similar to Flt3 interacting zinc finger protein 1 (LOC484292), mRNA Length = 4233 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 caccggctgctgcacggcacc 130 ||||||||||||||||||||| Sbjct: 4120 caccggctgctgcacggcacc 4140
>emb|BX248409.5| Human DNA sequence from clone RP11-360D2 on chromosome 1 Contains the 5' end of a novel gene (FLJ45235), a novel gene, the 5' end of the gene for Kelch motif containing protein, a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene and a CpG island, complete sequence Length = 127227 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 acttgggaggtggaggtgaga 90 ||||||||||||||||||||| Sbjct: 33999 acttgggaggtggaggtgaga 34019
>emb|AL390294.19| Human DNA sequence from clone RP11-379F12 on chromosome 10 Contains the 3' end of the TAF3 gene for TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa (TAF140,TAFII140), the GATA3 gene for GATA binding protein 3 (HDR,MGC5445), two novel genes and 3 CpG islands, complete sequence Length = 151559 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 acttgggaggtggaggtgaga 90 ||||||||||||||||||||| Sbjct: 88831 acttgggaggtggaggtgaga 88851
>emb|AL359834.18| Human DNA sequence from clone RP11-121P12 on chromosome 1 Contains the 3' end of a novel gene, complete sequence Length = 70248 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 acttgggaggtggaggtgaga 90 ||||||||||||||||||||| Sbjct: 8927 acttgggaggtggaggtgaga 8947
>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete sequence Length = 149978 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tcgacctcggcaaggcgcgcg 296 ||||||||||||||||||||| Sbjct: 107769 tcgacctcggcaaggcgcgcg 107749
>gb|AC026689.6| Homo sapiens chromosome 5 clone CTB-55A14, complete sequence Length = 215150 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 acttgggaggtggaggtgaga 90 ||||||||||||||||||||| Sbjct: 126318 acttgggaggtggaggtgaga 126298
>gb|AC008735.9| Homo sapiens chromosome 19 clone CTD-2537I9, complete sequence Length = 223879 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 caccggctgctgcacggcacc 130 ||||||||||||||||||||| Sbjct: 83784 caccggctgctgcacggcacc 83804
>dbj|AK027674.1| Homo sapiens cDNA FLJ14768 fis, clone NT2RP3004125, moderately similar to Mus musculus zinc finger protein splice variant FIZ1-B (Fiz1) mRNA Length = 2651 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 caccggctgctgcacggcacc 130 ||||||||||||||||||||| Sbjct: 1468 caccggctgctgcacggcacc 1488
>gb|AC099777.2| Homo sapiens chromosome 3 clone RP11-332H21, complete sequence Length = 206537 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 acttgggaggtggaggtgaga 90 ||||||||||||||||||||| Sbjct: 115114 acttgggaggtggaggtgaga 115094
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 368 gcccacttcgccgccgacgtcgtcttcaccgtc 400 |||| ||||||||||| ||||||||||| |||| Sbjct: 4333273 gccctcttcgccgccgtcgtcgtcttcatcgtc 4333241
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tcgacctcggcaaggcgcgcg 296 ||||||||||||||||||||| Sbjct: 16489670 tcgacctcggcaaggcgcgcg 16489650
>gb|AC005046.3|AC005046 Homo sapiens BAC clone CTB-13F3 from 7q22, complete sequence Length = 219436 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 acttgggaggtggaggtgaga 90 ||||||||||||||||||||| Sbjct: 145391 acttgggaggtggaggtgaga 145371
>gb|AF147413.1|AF147413 Homo sapiens full length insert cDNA clone YP60D12 Length = 564 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 acttgggaggtggaggtgaga 90 ||||||||||||||||||||| Sbjct: 530 acttgggaggtggaggtgaga 510
>gb|AC004486.1|AC004486 Homo sapiens 12q13 PAC RPCI3-432I18 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 92800 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 acttgggaggtggaggtgaga 90 ||||||||||||||||||||| Sbjct: 22882 acttgggaggtggaggtgaga 22902
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tcgacctcggcaaggcgcgcg 296 ||||||||||||||||||||| Sbjct: 16497911 tcgacctcggcaaggcgcgcg 16497891
>emb|AL671904.8| Mouse DNA sequence from clone RP23-243J2 on chromosome X, complete sequence Length = 132834 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 acttgggaggtggaggtgaga 90 ||||||||||||||||||||| Sbjct: 123024 acttgggaggtggaggtgaga 123004
>ref|XM_476015.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 867 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 acgccaccgtcgacctcggcaagg 290 ||||| |||||||||||||||||| Sbjct: 227 acgccgccgtcgacctcggcaagg 250
>ref|XM_468579.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 591 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 acctcaccaaccccgaccgcgcca 182 ||||| |||||||||||||||||| Sbjct: 122 acctcgccaaccccgaccgcgcca 145
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11, complete sequence Length = 146677 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cgccaccggcggcgcccccc 197 |||||||||||||||||||| Sbjct: 23894 cgccaccggcggcgcccccc 23875
>gb|AC121362.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009N21, complete sequence Length = 164925 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cgccaccggcggcgcccccc 197 |||||||||||||||||||| Sbjct: 128604 cgccaccggcggcgcccccc 128585
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 acgccaccgtcgacctcggcaagg 290 ||||| |||||||||||||||||| Sbjct: 133446 acgccgccgtcgacctcggcaagg 133469
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 acgccaccgtcgacctcggcaagg 290 ||||| |||||||||||||||||| Sbjct: 28644 acgccgccgtcgacctcggcaagg 28667
>ref|XM_762074.1| Giardia lamblia ATCC 50803 giardin alpha-1 chain (GLP_548_18100_18987) partial mRNA Length = 888 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tctactgcgcccacttcgcc 379 |||||||||||||||||||| Sbjct: 650 tctactgcgcccacttcgcc 669
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ggccgacaacctcaccaacc 170 |||||||||||||||||||| Sbjct: 322786 ggccgacaacctcaccaacc 322767 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ggccgacaacctcaccaacc 170 |||||||||||||||||||| Sbjct: 322510 ggccgacaacctcaccaacc 322491
>emb|X52485.1|GLAGIARD Giardia lamblia gene for alpha giardin Length = 1239 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tctactgcgcccacttcgcc 379 |||||||||||||||||||| Sbjct: 915 tctactgcgcccacttcgcc 934
>emb|AL596187.15| Mouse DNA sequence from clone RP23-287H9 on chromosome 11 Contains part of a novel gene, the 5' end of a gene that is a possible ortholog of human dynein axonemal heavy polypeptide 9 (DNAH9) and a CpG island, complete sequence Length = 202358 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cttgggaggtggaggtgaga 90 |||||||||||||||||||| Sbjct: 19894 cttgggaggtggaggtgaga 19875
>gb|AF403390.1| Grass carp reovirus strain GCRV-873 segment 4 non-structural protein NS1 gene, complete cds Length = 2320 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 tccacgccaccatcttggaggccgacaa 159 |||||||||||||| |||| |||||||| Sbjct: 1506 tccacgccaccatcctggaagccgacaa 1533
>gb|AE012438.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 346 of 460 of the complete genome Length = 10968 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cgaccgcgccaccggcggcg 191 |||||||||||||||||||| Sbjct: 6927 cgaccgcgccaccggcggcg 6908
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 cgacctcggcaaggcgcgcg 296 |||||||||||||||||||| Sbjct: 3287699 cgacctcggcaaggcgcgcg 3287718
>gb|AF312225.1|AF312225 Homo sapiens chromosome 2 map 2q37.1, complete sequence Length = 345102 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 acttgggaggtggaggtgag 89 |||||||||||||||||||| Sbjct: 73703 acttgggaggtggaggtgag 73722
>gb|AC019130.6| Homo sapiens BAC clone RP11-563E16 from 2, complete sequence Length = 139049 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 acttgggaggtggaggtgag 89 |||||||||||||||||||| Sbjct: 76816 acttgggaggtggaggtgag 76835
>gb|AC155709.5| Mus musculus 10 BAC RP24-200F4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176109 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 acttgggaggtggaggtgag 89 |||||||||||||||||||| Sbjct: 163298 acttgggaggtggaggtgag 163317
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cgaccgcgccaccggcggcg 191 |||||||||||||||||||| Sbjct: 1109245 cgaccgcgccaccggcggcg 1109226
>gb|AY781324.1| Giardia intestinalis alpha-1 giardin gene, complete cds Length = 888 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tctactgcgcccacttcgcc 379 |||||||||||||||||||| Sbjct: 650 tctactgcgcccacttcgcc 669
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 accgcgccaccggcggcgcc 193 |||||||||||||||||||| Sbjct: 2406652 accgcgccaccggcggcgcc 2406671
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 accgcgccaccggcggcgcc 193 |||||||||||||||||||| Sbjct: 819294 accgcgccaccggcggcgcc 819313
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12, complete sequence Length = 146241 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 acctcaccaaccccgaccgcgcca 182 ||||| |||||||||||||||||| Sbjct: 29368 acctcgccaaccccgaccgcgcca 29345
>emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chromosome 4, complete sequence Length = 205765 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ctggagctctgacttgggag 78 |||||||||||||||||||| Sbjct: 24110 ctggagctctgacttgggag 24091
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 298 cggccggacgcgggtcatcgccggcgacccgg 329 ||||| ||||||||||||||||| ||||||| Sbjct: 305452 cggcctgacgcgggtcatcgccgtggacccgg 305421
>dbj|AK104414.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B12, full insert sequence Length = 1268 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 acctcaccaaccccgaccgcgcca 182 ||||| |||||||||||||||||| Sbjct: 150 acctcgccaaccccgaccgcgcca 173
>dbj|AK071416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093A18, full insert sequence Length = 875 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 acctcaccaaccccgaccgcgcca 182 ||||| |||||||||||||||||| Sbjct: 153 acctcgccaaccccgaccgcgcca 176
>dbj|AK068438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154K17, full insert sequence Length = 1285 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 acctcaccaaccccgaccgcgcca 182 ||||| |||||||||||||||||| Sbjct: 153 acctcgccaaccccgaccgcgcca 176
>gb|AC151053.2| Mus musculus BAC clone RP23-402A4 from 7, complete sequence Length = 201862 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cttgggaggtggaggtgaga 90 |||||||||||||||||||| Sbjct: 68519 cttgggaggtggaggtgaga 68538
>gb|AC148977.3| Mus musculus BAC clone RP23-387F1 from 7, complete sequence Length = 201967 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cttgggaggtggaggtgaga 90 |||||||||||||||||||| Sbjct: 5024 cttgggaggtggaggtgaga 5043
>emb|AL731670.13| Mouse DNA sequence from clone RP23-463E7 on chromosome 11, complete sequence Length = 198411 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cttgggaggtggaggtgaga 90 |||||||||||||||||||| Sbjct: 89567 cttgggaggtggaggtgaga 89548
>gb|AC152980.2| Mus musculus 10 BAC RP23-462F3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165602 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 acttgggaggtggaggtgag 89 |||||||||||||||||||| Sbjct: 34617 acttgggaggtggaggtgag 34636 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,651,387 Number of Sequences: 3902068 Number of extensions: 2651387 Number of successful extensions: 113295 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 111611 Number of HSP's gapped (non-prelim): 1683 length of query: 404 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 382 effective length of database: 17,147,199,772 effective search space: 6550230312904 effective search space used: 6550230312904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)