Clone Name | bastl24g01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SP7_MOUSE (Q8VI67) Transcription factor Sp7 (Zinc finger protein... | 29 | 3.9 | 2 | GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10 | 28 | 8.8 | 3 | KRA51_HUMAN (Q6L8H4) Keratin-associated protein 5-1 (Keratin-ass... | 28 | 8.8 | 4 | SP7_HUMAN (Q8TDD2) Transcription factor Sp7 (Zinc finger protein... | 28 | 8.8 |
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>SP7_MOUSE (Q8VI67) Transcription factor Sp7 (Zinc finger protein osterix)| (C22) Length = 428 Score = 28.9 bits (63), Expect = 3.9 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -2 Query: 67 GSGGFWSRGAGSGAGLTACDC 5 GSGG+ AGSGAG + CDC Sbjct: 253 GSGGY----AGSGAGRSTCDC 269
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 27.7 bits (60), Expect = 8.8 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -2 Query: 79 GDSRGSGGFWSRGAGSGAG 23 GD RG GG+ S G G G G Sbjct: 114 GDRRGGGGYGSGGGGRGGG 132
>KRA51_HUMAN (Q6L8H4) Keratin-associated protein 5-1 (Keratin-associated protein| 5.1) (Ultrahigh sulfur keratin-associated protein 5.1) Length = 278 Score = 27.7 bits (60), Expect = 8.8 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -2 Query: 79 GDSRGSGGFWSRGAGSGAGLTACDCS 2 G S+G G G GSG G+ C CS Sbjct: 191 GGSKGGCGSGCGGCGSGCGVPVCCCS 216
>SP7_HUMAN (Q8TDD2) Transcription factor Sp7 (Zinc finger protein osterix)| Length = 431 Score = 27.7 bits (60), Expect = 8.8 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -2 Query: 67 GSGGFWSRGAGSGAGLTACDC 5 GSGG+ GSGAG ++CDC Sbjct: 256 GSGGY----GGSGAGRSSCDC 272 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.123 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,974,562 Number of Sequences: 219361 Number of extensions: 135048 Number of successful extensions: 1862 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 620 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1848 length of database: 80,573,946 effective HSP length: 35 effective length of database: 72,896,311 effective search space used: 1749511464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)