>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 140     ctcggccatggcgaagacgaag 161
               ||||||||||||||||||||||
Sbjct: 1409974 ctcggccatggcgaagacgaag 1409995

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 142      cggccatggcgaagacgaagccgatggcagctg 174
                |||| ||||||||||||||||| ||||| ||||
Sbjct: 22100438 cggcaatggcgaagacgaagcccatggcggctg 22100406

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 142      cggccatggcgaagacgaagccgatggcagctg 174
                |||| ||||||||||||||||| ||||| ||||
Sbjct: 22093467 cggcaatggcgaagacgaagcccatggcggctg 22093435

>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete
             sequence
          Length = 167397

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 142   cggccatggcgaagacgaagccgatggcagctg 174
             |||| ||||||||||||||||| ||||| ||||
Sbjct: 47844 cggcaatggcgaagacgaagcccatggcggctg 47876

>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete
              sequence
          Length = 132987

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 142    cggccatggcgaagacgaagccgatggcagctg 174
              |||| ||||||||||||||||| ||||| ||||
Sbjct: 124442 cggcaatggcgaagacgaagcccatggcggctg 124474

>ref|NM_184796.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2859

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 147 atggcgaagacgaagccgatggcagctg 174
           ||||||||||||||||| ||||| ||||
Sbjct: 1   atggcgaagacgaagcccatggcggctg 28

>emb|X63462.1|RCHEL R.capsulatus ORF124, helA, helB, helC & ORF52 DNA
          Length = 3272

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 ccatggcgaagacgaagccg 164
           ||||||||||||||||||||
Sbjct: 259 ccatggcgaagacgaagccg 240

>gb|U69979.1|RCU69979 Rhodobacter capsulatus YajC (yajC) gene, partial cds, and SecD (secD)
            and SecF (secF) genes, complete cds
          Length = 3000

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  ccatggcgaagacgaagccg 164
            ||||||||||||||||||||
Sbjct: 2755 ccatggcgaagacgaagccg 2736

>ref|NM_188788.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1131

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 127  cgtcgcgctccgtctcggccatggcga 153
            ||||| |||||| ||||||||||||||
Sbjct: 1063 cgtcgagctccgcctcggccatggcga 1037

>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 123     acgacgtcgcgctccgtctcggc 145
               ||||||| |||||||||||||||
Sbjct: 1213339 acgacgtagcgctccgtctcggc 1213361

>gb|AC167666.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940120D9, complete sequence
          Length = 115819

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 161   gccgatggcagctggcgcg 179
             |||||||||||||||||||
Sbjct: 45095 gccgatggcagctggcgcg 45077

>ref|XM_518573.1| PREDICTED: Pan troglodytes similar to chromosome 6 open reading
           frame 209 (LOC462809), mRNA
          Length = 1791

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 172 ctggcgcggcctcggcgga 190
           |||||||||||||||||||
Sbjct: 206 ctggcgcggcctcggcgga 224

>ref|NM_018368.2| Homo sapiens LMBR1 domain containing 1 (LMBRD1), mRNA
          Length = 2076

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 172 ctggcgcggcctcggcgga 190
           |||||||||||||||||||
Sbjct: 126 ctggcgcggcctcggcgga 144

>gb|AE009048.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 74 of
            256 of the complete sequence
          Length = 10288

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 161  gccgatggcagctggcgcg 179
            |||||||||||||||||||
Sbjct: 4163 gccgatggcagctggcgcg 4145

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 147     atggcgaagacgaagccga 165
               |||||||||||||||||||
Sbjct: 3540511 atggcgaagacgaagccga 3540529

>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 127    cgtcgcgctccgtctcggccatggcga 153
              ||||| |||||| ||||||||||||||
Sbjct: 155335 cgtcgagctccgcctcggccatggcga 155309

>emb|AL590702.17| Human DNA sequence from clone RP13-371D18 on chromosome 6 Contains the
             5' end of a novel gene (CD001, BM-021, FLJ11240), a
             nucleophosmin (nucleolar phosphoprotein B23, numatrin)
             (NPM1) pseudogene, a glyceraldehyde-3-phosphate
             dehydrogenase (GAPD) pseudogene and a CpG island, complete
             sequence
          Length = 113587

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 172   ctggcgcggcctcggcgga 190
             |||||||||||||||||||
Sbjct: 95068 ctggcgcggcctcggcgga 95050

>gb|BC047073.1| Homo sapiens LMBR1 domain containing 1, mRNA (cDNA clone MGC:48309
           IMAGE:5274221), complete cds
          Length = 2076

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 172 ctggcgcggcctcggcgga 190
           |||||||||||||||||||
Sbjct: 126 ctggcgcggcctcggcgga 144

>gb|BC010360.1| Homo sapiens LMBR1 domain containing 1, mRNA (cDNA clone
           IMAGE:4108985), complete cds
          Length = 1727

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 172 ctggcgcggcctcggcgga 190
           |||||||||||||||||||
Sbjct: 19  ctggcgcggcctcggcgga 37

>dbj|AK002102.1| Homo sapiens cDNA FLJ11240 fis, clone PLACE1008568
          Length = 1947

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 172 ctggcgcggcctcggcgga 190
           |||||||||||||||||||
Sbjct: 36  ctggcgcggcctcggcgga 54

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 159     aagccgatggcagctggcg 177
               |||||||||||||||||||
Sbjct: 4300266 aagccgatggcagctggcg 4300248

>gb|AF113224.1| Homo sapiens MSTP044 mRNA, complete cds
          Length = 2012

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 172 ctggcgcggcctcggcgga 190
           |||||||||||||||||||
Sbjct: 7   ctggcgcggcctcggcgga 25

>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 161    gccgatggcagctggcgcg 179
              |||||||||||||||||||
Sbjct: 811080 gccgatggcagctggcgcg 811062

>dbj|AB169601.1| Macaca fascicularis brain cDNA, clone: QnpA-16111, similar to human
           chromosome 6 open reading frame 209 (C6orf209), mRNA,
           RefSeq: NM_018368.2
          Length = 2054

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 172 ctggcgcggcctcggcgga 190
           |||||||||||||||||||
Sbjct: 126 ctggcgcggcctcggcgga 144

>gb|AC021019.5|AC021019 Homo sapiens BAC clone RP11-496J3 from 6, complete sequence
          Length = 220216

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 172    ctggcgcggcctcggcgga 190
              |||||||||||||||||||
Sbjct: 216937 ctggcgcggcctcggcgga 216919

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 149      ggcgaagacgaagccgatg 167
                |||||||||||||||||||
Sbjct: 21740033 ggcgaagacgaagccgatg 21740015



 Score = 38.2 bits (19), Expect = 9.4
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 127     cgtcgcgctccgtctcggccatggcga 153
               ||||| |||||| ||||||||||||||
Sbjct: 8191214 cgtcgagctccgcctcggccatggcga 8191188

>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034C11
          Length = 139399

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 127    cgtcgcgctccgtctcggccatggcga 153
              ||||| |||||| ||||||||||||||
Sbjct: 108932 cgtcgagctccgcctcggccatggcga 108906

>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0002B05
          Length = 141275

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 149   ggcgaagacgaagccgatg 167
             |||||||||||||||||||
Sbjct: 92084 ggcgaagacgaagccgatg 92066

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 152     gaagacgaagccgatggca 170
               |||||||||||||||||||
Sbjct: 1759289 gaagacgaagccgatggca 1759271

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 152     gaagacgaagccgatggca 170
               |||||||||||||||||||
Sbjct: 2263300 gaagacgaagccgatggca 2263282


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 605,284
Number of Sequences: 3902068
Number of extensions: 605284
Number of successful extensions: 41325
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40769
Number of HSP's gapped (non-prelim): 556
length of query: 190
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 168
effective length of database: 17,147,199,772
effective search space: 2880729561696
effective search space used: 2880729561696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)