ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl24e08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 73 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 132 Query: 282 aacgccggtatgaaccagtacaggccggtcttcctcggcgccgccgacccggactcgccg 341 |||||||| |||||||||| || |||||||||||||||| |||||| ||||||| ||||| Sbjct: 133 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 192 Query: 342 ctcggccgcctgcgccgtgcctg 364 || |||||||| ||||| ||||| Sbjct: 193 ctgggccgcctccgccgcgcctg 215
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 155149 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 155208 Query: 282 aacgccggtatgaaccagtacaggccggtcttcctcggcgccgccgacccggactcgccg 341 |||||||| |||||||||| || |||||||||||||||| |||||| ||||||| ||||| Sbjct: 155209 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 155268 Query: 342 ctcggccgcctgcgccgtgcctg 364 || |||||||| ||||| ||||| Sbjct: 155269 ctgggccgcctccgccgcgcctg 155291
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 46576 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 46635 Query: 282 aacgccggtatgaaccagtacaggccggtcttcctcggcgccgccgacccggactcgccg 341 |||||||| |||||||||| || |||||||||||||||| |||||| ||||||| ||||| Sbjct: 46636 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 46695 Query: 342 ctcggccgcctgcgccgtgcctg 364 || |||||||| ||||| ||||| Sbjct: 46696 ctgggccgcctccgccgcgcctg 46718
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 5283378 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 5283437 Query: 282 aacgccggtatgaaccagtacaggccggtcttcctcggcgccgccgacccggactcgccg 341 |||||||| |||||||||| || |||||||||||||||| |||||| ||||||| ||||| Sbjct: 5283438 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 5283497 Query: 342 ctcggccgcctgcgccgtgcctg 364 || |||||||| ||||| ||||| Sbjct: 5283498 ctgggccgcctccgccgcgcctg 5283520
>dbj|AK066368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M16, full insert sequence Length = 3214 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 219 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 278 Query: 282 aacgccggtatgaaccagtacaggccggtcttcctcggcgccgccgacccggactcgccg 341 |||||||| |||||||||| || |||||||||||||||| |||||| ||||||| ||||| Sbjct: 279 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 338 Query: 342 ctcggccgcctgcgccgtgcctg 364 || |||||||| ||||| ||||| Sbjct: 339 ctgggccgcctccgccgcgcctg 361
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 5284165 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 5284224 Query: 282 aacgccggtatgaaccagtacaggccggtcttcctcggcgccgccgacccggactcgccg 341 |||||||| |||||||||| || |||||||||||||||| |||||| ||||||| ||||| Sbjct: 5284225 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 5284284 Query: 342 ctcggccgcctgcgccgtgcctg 364 || |||||||| ||||| ||||| Sbjct: 5284285 ctgggccgcctccgccgcgcctg 5284307
>gb|AY104750.1| Zea mays PCO077049 mRNA sequence Length = 3244 Score = 149 bits (75), Expect = 7e-33 Identities = 120/135 (88%) Strand = Plus / Plus Query: 230 gtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgccaacgccgg 289 |||||||||||| |||||||| ||| |||| ||||||||||| |||||||||||||| || Sbjct: 227 gtggccgtcgagtcccgtggtccccgtcgacgaccccacgctgctgttcgccaacgctgg 286 Query: 290 tatgaaccagtacaggccggtcttcctcggcgccgccgacccggactcgccgctcggccg 349 |||||||||| || |||||||||||||||| | || | |||||||||||||||||||| Sbjct: 287 aatgaaccagttcaagccggtcttcctcggcacagcggcgccggactcgccgctcggccg 346 Query: 350 cctgcgccgtgcctg 364 ||||| ||||||||| Sbjct: 347 cctgcaccgtgcctg 361
>ref|XM_756287.1| Ustilago maydis 521 hypothetical protein (UM05233.1) partial mRNA Length = 2973 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 252 cccttcgaggaccccacgctcctgttcgccaacgccggtatgaaccagtaca 303 |||| ||| ||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 148 ccctacgatgacccaacgcttctcttcgccaacgccggtatgaaccagtaca 199
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 ||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 163902 gacccaacgctcctgttcgccaatgccggcatgaaccagt 163941
>ref|XM_500483.1| Yarrowia lipolytica CLIB122, YALI0B04180g predicted mRNA Length = 2883 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 274 tgttcgccaacgccggtatgaaccagtaca 303 |||| ||||||||||||||||||||||||| Sbjct: 131 tgtttgccaacgccggtatgaaccagtaca 160
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 274 tgttcgccaacgccggtatgaaccagtaca 303 |||| ||||||||||||||||||||||||| Sbjct: 553292 tgtttgccaacgccggtatgaaccagtaca 553263
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Minus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagt 300 ||||||||| | ||| ||||||||||||||||||||| Sbjct: 3572273 cccacgctcttattcaccaacgccggtatgaaccagt 3572237
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Minus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaggccggtcttcct 316 ||||||||||| |||| || |||||||| |||||||||| || |||| ||||||| Sbjct: 1350851 gaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagccgatcttcct 1350796
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 ||||| ||||| |||||| |||| |||||||||||||||| Sbjct: 172936 gacccgacgctgctgttcaccaatgccggtatgaaccagt 172975
>ref|NM_209812.1| Eremothecium gossypii ADR363Cp (ADR363C), mRNA Length = 2871 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaggccggtcttcct 316 ||||||||||| |||| || |||||||| |||||||||| || |||| ||||||| Sbjct: 118 gaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagccgatcttcct 173
>gb|AY846866.1| Antheraea pernyi nucleopolyhedrovirus occlusion-derived virus envelope-56 protein (odv-e56) gene, complete cds Length = 1602 Score = 46.1 bits (23), Expect = 0.079 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 cgccgccgacccggactcgccgc 342 ||||||||||||||||||||||| Sbjct: 990 cgccgccgacccggactcgccgc 1012
>gb|DQ486030.1| Antheraea pernyi nucleopolyhedrovirus, complete genome Length = 126479 Score = 46.1 bits (23), Expect = 0.079 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 cgccgccgacccggactcgccgc 342 ||||||||||||||||||||||| Sbjct: 7946 cgccgccgacccggactcgccgc 7968
>ref|XM_571590.1| Cryptococcus neoformans var. neoformans JEC21 alanine-tRNA ligase (CNF02520) partial mRNA Length = 3234 Score = 46.1 bits (23), Expect = 0.079 Identities = 44/51 (86%) Strand = Plus / Plus Query: 266 cacgctcctgttcgccaacgccggtatgaaccagtacaggccggtcttcct 316 |||||| || |||||||| || |||||||||||||||| ||| ||||||| Sbjct: 377 cacgcttcttttcgccaatgctggtatgaaccagtacaagcctctcttcct 427
>emb|AJ243674.3|SGR243674 Streptomyces griseus subsp. griseus (partial) ppk, mutT, pstS, pstC, pstA, pstB, pitH genes and ORF Length = 9302 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 308 ggtcttcctcggcgccgccgacccgg 333 |||| ||||||||||||||||||||| Sbjct: 3000 ggtcgtcctcggcgccgccgacccgg 3025
>ref|XM_694672.1| PREDICTED: Danio rerio similar to alanyl-tRNA synthetase (LOC571112), partial mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 265 gaccccacgctgctcttcgccaatgccggaatgaacca 302
>ref|XM_685358.1| PREDICTED: Danio rerio similar to transglutaminase (LOC561962), mRNA Length = 3195 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 2275 gaccccacgctgctcttcgccaatgccggaatgaacca 2312
>ref|XM_685225.1| PREDICTED: Danio rerio similar to alanyl-tRNA synthetase (LOC561826), mRNA Length = 589 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 122 gaccccacgctgctcttcgccaatgccggaatgaacca 159
>ref|XM_685155.1| PREDICTED: Danio rerio similar to transglutaminase (LOC561748), mRNA Length = 1992 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 1525 gaccccacgctgctcttcgccaatgccggaatgaacca 1562
>ref|XM_683097.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC559731), mRNA Length = 589 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 122 gaccccacgctgctcttcgccaatgccggaatgaacca 159
>ref|XM_682611.1| PREDICTED: Danio rerio similar to alanyl-tRNA synthetase (LOC559282), mRNA Length = 2178 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 106 gaccccacgctgctcttcgccaatgccggaatgaacca 143
>ref|XM_702496.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 3 (LOC559189), mRNA Length = 3672 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 259 gaccccacgctgctcttcgccaatgccggaatgaacca 296
>ref|XM_679559.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 1 (LOC559189), mRNA Length = 3613 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 200 gaccccacgctgctcttcgccaatgccggaatgaacca 237
>ref|XM_702495.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 2 (LOC559189), mRNA Length = 589 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 122 gaccccacgctgctcttcgccaatgccggaatgaacca 159
>ref|XM_682457.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC559142), mRNA Length = 2334 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 106 gaccccacgctgctcttcgccaatgccggaatgaacca 143
>emb|BX571681.7| Zebrafish DNA sequence from clone DKEY-73N10 in linkage group 18, complete sequence Length = 184543 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 151021 gaccccacgctgctcttcgccaatgccggaatgaacca 151058 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 122916 gaccccacgctgctcttcgccaatgccggaatgaacca 122953
>emb|BX571883.3| Zebrafish DNA sequence from clone DKEY-151P17 in linkage group 18, complete sequence Length = 253172 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 242002 gaccccacgctgctcttcgccaatgccggaatgaacca 242039 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 203829 gaccccacgctgctcttcgccaatgccggaatgaacca 203866 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 159527 gaccccacgctgctcttcgccaatgccggaatgaacca 159564
>ref|XM_318757.2| Anopheles gambiae str. PEST ENSANGP00000013174 (ENSANGG00000010685), partial mRNA Length = 2898 Score = 44.1 bits (22), Expect = 0.31 Identities = 46/54 (85%) Strand = Plus / Plus Query: 267 acgctcctgttcgccaacgccggtatgaaccagtacaggccggtcttcctcggc 320 ||||| ||||||||||| || || |||||||||| || |||| |||| |||||| Sbjct: 106 acgctgctgttcgccaatgcgggcatgaaccagttcaagccgatctttctcggc 159
>emb|BX649641.19| Zebrafish DNA sequence from clone CH211-223O1 in linkage group 18, complete sequence Length = 141018 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 99166 gaccccacgctgctcttcgccaatgccggaatgaacca 99203 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 34711 gaccccacgctgctcttcgccaatgccggaatgaacca 34748 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 12338 gaccccacgctgctcttcgccaatgccggaatgaacca 12375
>gb|BC071378.1| Danio rerio alanyl-tRNA synthetase, mRNA (cDNA clone IMAGE:6895974), partial cds Length = 2471 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 305 gaccccacgctgctcttcgccaatgccggaatgaacca 342
>ref|XM_921089.2| PREDICTED: Mus musculus hypothetical LOC634280 (LOC634280), mRNA Length = 792 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cgctcggccgcctgcgccgtg 360 ||||||||||||||||||||| Sbjct: 647 cgctcggccgcctgcgccgtg 627
>ref|XM_898698.2| PREDICTED: Mus musculus hypothetical LOC625276 (LOC625276), mRNA Length = 792 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cgctcggccgcctgcgccgtg 360 ||||||||||||||||||||| Sbjct: 647 cgctcggccgcctgcgccgtg 627
>ref|NM_205934.1| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RB, transcript variant B (Aats-ala), mRNA Length = 3290 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| |||||||||||||||| ||||| |||| Sbjct: 332 cccacgctgttgttcgccaacgccggcatgaatcagt 368
>ref|NM_078787.2| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RA, transcript variant A (Aats-ala), mRNA Length = 3151 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| |||||||||||||||| ||||| |||| Sbjct: 193 cccacgctgttgttcgccaacgccggcatgaatcagt 229
>gb|AY069255.1| Drosophila melanogaster GM03058 full length cDNA Length = 3308 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| |||||||||||||||| ||||| |||| Sbjct: 333 cccacgctgttgttcgccaacgccggcatgaatcagt 369
>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone BACR02I15, complete sequence Length = 186490 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| |||||||||||||||| ||||| |||| Sbjct: 3508 cccacgctgttgttcgccaacgccggcatgaatcagt 3472
>gb|AC092220.1|AC092220 Drosophila melanogaster, chromosome 2L, region 28B-29X, BAC clone BACR15P08, complete sequence Length = 170649 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| |||||||||||||||| ||||| |||| Sbjct: 24394 cccacgctgttgttcgccaacgccggcatgaatcagt 24430
>gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, complete sequence Length = 201535 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cgctcggccgcctgcgccgtg 360 ||||||||||||||||||||| Sbjct: 23900 cgctcggccgcctgcgccgtg 23880
>gb|AF188718.1|AF188718 Drosophila melanogaster alanyl-tRNA synthetase (alaS) mRNA, complete cds Length = 3117 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| |||||||||||||||| ||||| |||| Sbjct: 174 cccacgctgttgttcgccaacgccggcatgaatcagt 210
>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete sequence Length = 308031 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| |||||||||||||||| ||||| |||| Sbjct: 19670 cccacgctgttgttcgccaacgccggcatgaatcagt 19634
>gb|AC004423.1|AC004423 Drosophila melanogaster DNA sequence (P1 DS02110 (D147)), complete sequence Length = 79076 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| |||||||||||||||| ||||| |||| Sbjct: 2012 cccacgctgttgttcgccaacgccggcatgaatcagt 1976
>ref|XM_467910.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1559 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 570 gtcttcctcggcgccgccga 589
>gb|BC008881.2| Homo sapiens kinesin 2, transcript variant 1, mRNA (cDNA clone MGC:15245 IMAGE:4301579), complete cds Length = 2595 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 ccgctcggccgcctgcgccg 358 |||||||||||||||||||| Sbjct: 21 ccgctcggccgcctgcgccg 2
>ref|XM_363444.1| Magnaporthe grisea 70-15 hypothetical protein (MG01370.4) partial mRNA Length = 2184 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 acacgccgtggccgtcgagc 242 |||||||||||||||||||| Sbjct: 943 acacgccgtggccgtcgagc 924
>gb|BC033273.1| Mus musculus alanyl-tRNA synthetase, mRNA (cDNA clone MGC:25868 IMAGE:4196789), complete cds Length = 4891 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 424 gaccccactctgctcttcgccaacgctggcatgaaccagt 463
>ref|NM_146217.3| Mus musculus alanyl-tRNA synthetase (Aars), mRNA Length = 4891 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 424 gaccccactctgctcttcgccaacgctggcatgaaccagt 463
>ref|XM_677497.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9320.2), mRNA Length = 3165 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ctggccgtccgccctggtcc 186 |||||||||||||||||||| Sbjct: 2580 ctggccgtccgccctggtcc 2599
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 134136 ctcggccgcctgcgccgtgc 134155
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 133096 ctcggccgcctgcgccgtgc 133115
>ref|XM_851041.1| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit), transcript variant 3 (LOC482962), mRNA Length = 2121 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgcgccgcctgctcctcacc 47 |||||||||||||||||||| Sbjct: 86 cgcgccgcctgctcctcacc 105
>ref|XM_851001.1| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit), transcript variant 2 (LOC482962), mRNA Length = 1891 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgcgccgcctgctcctcacc 47 |||||||||||||||||||| Sbjct: 86 cgcgccgcctgctcctcacc 105
>ref|XM_540075.2| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit), transcript variant 1 (LOC482962), mRNA Length = 2269 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgcgccgcctgctcctcacc 47 |||||||||||||||||||| Sbjct: 86 cgcgccgcctgctcctcacc 105
>ref|XM_381082.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00906.1) partial mRNA Length = 2874 Score = 40.1 bits (20), Expect = 4.9 Identities = 50/60 (83%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaggccggtcttcctcggc 320 |||||||| || || ||| ||||||| || |||||||||| || ||| ||||||||||| Sbjct: 115 gaccccaccctgctcttcaccaacgctggcatgaaccagttcaagcccatcttcctcggc 174
>gb|AY223875.1| Mus musculus alanyl-tRNA synthase (Aars) mRNA, complete cds Length = 3654 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 489 gaccccactctgctcttcgccaacgctggcatgaaccagt 528
>ref|XM_789424.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl-tRNA synthetase (LOC589790), mRNA Length = 3300 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 ||||| || ||||| |||||||| || ||||||||||||| Sbjct: 115 gaccctaccctcctcttcgccaatgcgggtatgaaccagt 154
>dbj|AK158139.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930035D01 product:alanyl-tRNA synthetase, full insert sequence Length = 3677 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 498 gaccccactctgctcttcgccaacgctggcatgaaccagt 537
>dbj|AK150227.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530145P07 product:alanyl-tRNA synthetase, full insert sequence Length = 3639 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 477 gaccccactctgctcttcgccaacgctggcatgaaccagt 516
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 133375 ctcggccgcctgcgccgtgc 133394
>dbj|AK036738.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830169C09 product:alanyl-tRNA synthetase, full insert sequence Length = 4191 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 158 gaccccactctgctcttcgccaacgctggcatgaaccagt 197
>ref|NM_005552.3| Homo sapiens kinesin 2 (KNS2), transcript variant 1, mRNA Length = 2595 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 ccgctcggccgcctgcgccg 358 |||||||||||||||||||| Sbjct: 21 ccgctcggccgcctgcgccg 2
>dbj|AK052744.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630041L13 product:similar to ALARS A [Caenorhabditis elegans], full insert sequence Length = 2222 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 158 gaccccactctgctcttcgccaacgctggcatgaaccagt 197
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 gactcgccgctcggccgcctgcgc 356 ||||||||| |||||||||||||| Sbjct: 3882430 gactcgccggtcggccgcctgcgc 3882453
>gb|AY186732.1| Orf virus strain D1701 ankyrin-repeat protein ANK-1 (ANK-1), interleukin 10 (IL-10), ankyrin-repeat protein ANK-2 (ANK-2), ankyrin-repeat protein ANK-3 (ANK-3), vaccinia virus F10L-like protein (F10L), vaccinia virus F9L-like protein (F9L), vascular endothelial growth factor-like protein (VEGF-E), and ORF3 genes, complete cds Length = 9979 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 7314 ctcggccgcctgcgccgtgc 7333
>dbj|AK044451.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930013P06 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3463 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 300 gaccccactctgctcttcgccaacgctggcatgaaccagt 339
>dbj|AK085725.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730028M10 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3653 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 490 gaccccactctgctcttcgccaacgctggcatgaaccagt 529
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 32040633 gtcttcctcggcgccgccga 32040652
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ccgctcggccgcctgcgccg 358 |||||||||||||||||||| Sbjct: 4161736 ccgctcggccgcctgcgccg 4161755
>dbj|AK192606.1| Mus musculus cDNA, clone:Y1G0109G10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 70 gaccccaccctgctcttcgccaacgctggcatgaaccagt 109
>emb|AL929404.19| Mouse DNA sequence from clone RP23-71H9 on chromosome 2, complete sequence Length = 187610 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 caagtcaaagccaagagctaggga 73 |||||||||||| ||||||||||| Sbjct: 109716 caagtcaaagcctagagctaggga 109739
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 61008 gtcttcctcggcgccgccga 61027
>dbj|AK111163.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B04, full insert sequence Length = 3036 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 ccaacgccggtatgaaccagtaca 303 ||||||| |||||||||||||||| Sbjct: 224 ccaacgctggtatgaaccagtaca 247
>dbj|AK069088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007I17, full insert sequence Length = 1559 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 570 gtcttcctcggcgccgccga 589
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 2728320 gtcttcctcggcgccgccga 2728339
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cgccgctcggccgcctgcgc 356 |||||||||||||||||||| Sbjct: 2089326 cgccgctcggccgcctgcgc 2089345
>emb|BX664601.6| Zebrafish DNA sequence from clone CH211-135J1 in linkage group 22, complete sequence Length = 76145 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tcacagcgcgccgcctgctc 41 |||||||||||||||||||| Sbjct: 28184 tcacagcgcgccgcctgctc 28203
>emb|BX465190.4| Zebrafish DNA sequence from clone DKEY-121A11 in linkage group 22, complete sequence Length = 183103 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tcacagcgcgccgcctgctc 41 |||||||||||||||||||| Sbjct: 18290 tcacagcgcgccgcctgctc 18271
>emb|AL139300.6|CNS01DXG Human chromosome 14 DNA sequence BAC R-894P9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191563 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ccgctcggccgcctgcgccg 358 |||||||||||||||||||| Sbjct: 52087 ccgctcggccgcctgcgccg 52106
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||||||| ||||| |||| ||||| ||||| |||| Sbjct: 1322035 gaccccacgctcatgttcaccaatgccggcatgaatcagt 1322074
>gb|U29944.1|OVU29944 Orf virus protein kinase homolog and F9L homolog genes, complete cds Length = 2211 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 1659 ctcggccgcctgcgccgtgc 1678 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,095,258 Number of Sequences: 3902068 Number of extensions: 2095258 Number of successful extensions: 52140 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51307 Number of HSP's gapped (non-prelim): 833 length of query: 365 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 343 effective length of database: 17,147,199,772 effective search space: 5881489521796 effective search space used: 5881489521796 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
