>ADA2B_DUGDU (O77713) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Fragment)
          Length = 390

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = -3

Query: 217 PRNQASKQKHLSDGNEPLLCSWPPTSCSTKCSAGRNGGAAPPREAKELSREHQGT 53
           PR   SKQ H  D     L + P  + S   +   NG + PP E +  + E  GT
Sbjct: 200 PRKGESKQPHSLDSGPSALANLPTLASSLAVAGEANGHSMPPGEKERETSEDPGT 254

>CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 (EC 3.-.-.-)|
           (Cellular zinc finger anti-NF-kappa B protein) (Zinc
           finger protein Cezanne)
          Length = 843

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 12/76 (15%)
 Frame = -3

Query: 196 QKHLSDGNEPLLCSWPPTSCSTKCSAGRNGGAAPPREAKEL-SREHQGTSP--------- 47
           Q++LSD  E  L          K   G  GG  PP +  E  +RE Q T P         
Sbjct: 629 QRYLSDAEERFLAEQKQKEAERKIMNGGIGGGPPPAKKPEPDAREEQPTGPPAESRAMAF 688

Query: 46  --GFLGLLMIPGARGG 5
             G+ G   IP   GG
Sbjct: 689 STGYPGDFTIPRPSGG 704

>ADA2B_ELEMA (O19014) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Fragment)
          Length = 384

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 20/73 (27%), Positives = 31/73 (42%)
 Frame = -3

Query: 271 ILTVSVSTNRGDLWSEIAPRNQASKQKHLSDGNEPLLCSWPPTSCSTKCSAGRNGGAAPP 92
           I  ++  +NR    ++ APR    KQ H        L + P  + S   +   NG + PP
Sbjct: 182 IYLIAKRSNRRGPRAKGAPREGEPKQPHPLPAGPSALANSPTLASSLAVTGEANGHSEPP 241

Query: 91  REAKELSREHQGT 53
            E +  + E  GT
Sbjct: 242 GEKERETPEDPGT 254

>PROP_MOUSE (P11680) Properdin precursor (Factor P)|
          Length = 464

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -2

Query: 122 SRTKWRRCSTEGSQRAQPRTPGNLAWFLGLVDD-PWCP 12
           S+ + RRC   G Q ++   PG L W L   +D P CP
Sbjct: 93  SQLRHRRCVGRGGQCSENVAPGTLEWQLQACEDQPCCP 130

>FZD2_RAT (Q08464) Frizzled 2 precursor (Frizzled-2) (Fz-2) (rFz2)|
          Length = 570

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 7/52 (13%)
 Frame = -3

Query: 217 PRNQASK----QKHLSDGNEPLLCSWPPTSCSTKCS---AGRNGGAAPPREA 83
           PR+ A +    Q H  DG   LL + PP+           G  GG APPR A
Sbjct: 147 PRHGAEQICVGQNHSEDGTPALLTTAPPSGLQPGAGGTPGGPGGGGAPPRYA 198

>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)|
          Length = 1708

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -3

Query: 220 APRNQASKQKHLSDGNEPLLCSWPPTSCSTKCSAGRNGGAAPPREAKELSREHQ 59
           AP+   S+  H S    PL  + PP           NGGA PP    E S ++Q
Sbjct: 49  APQPSLSRSPHYSHAPSPLPATLPPL----------NGGAPPPGHHPEPSSQYQ 92

>APX1_CAEEL (P41990) Anterior pharynx in excess protein 1 precursor|
          Length = 515

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
 Frame = -3

Query: 289 LCTVFSILTVSVSTNRGDLWSEIAPRNQASKQKHLSD---GNEPLLCSWPPTSCSTKCSA 119
           +C +FS+  + ++     L S     +  SK KH S    G   +L    PT+ S   S 
Sbjct: 396 ICVLFSVCVIGLA-----LVSFFFYMHSFSKWKHPSSQQAGGSTIL----PTTTSIPMST 446

Query: 118 GRNGGAAPPREAKELSREHQGTSPG 44
             +G  +P  +   +  EH+G +PG
Sbjct: 447 TSSGTGSPVYKVCIIDSEHRGNAPG 471

>SP4_HUMAN (Q02446) Transcription factor Sp4 (SPR-1)|
          Length = 784

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/78 (23%), Positives = 34/78 (43%)
 Frame = -3

Query: 241 GDLWSEIAPRNQASKQKHLSDGNEPLLCSWPPTSCSTKCSAGRNGGAAPPREAKELSREH 62
           G+ W  +A    ASK+ ++S           P S S+  S+  NG A+P +     ++  
Sbjct: 99  GNAWQLVASTPPASKENNVSQ----------PASSSSSSSSSNNGSASPTK-----TKSG 143

Query: 61  QGTSPGFLGLLMIPGARG 8
             ++PG   ++ +    G
Sbjct: 144 NSSTPGQFQVIQVQNPSG 161

>MIS_BOVIN (P03972) Muellerian-inhibiting factor precursor (MIS)|
           (Anti-Muellerian hormone) (AMH) (Mullerian-inhibiting
           substance)
          Length = 575

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 193 KHLSDGNEPLLCSWPPTSCSTKCSAGRNGGAAP 95
           + L DG EPLL   PPT+ +T   A   G  +P
Sbjct: 352 ERLLDGEEPLLLLLPPTAATTGVPATPQGPKSP 384

>STC_DROME (P40798) Protein shuttle craft|
          Length = 1106

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 160 CSWPPTSCSTKCSAGRNGGAAPPREAKEL 74
           C+ P  +C  KC+A  + GA P    KEL
Sbjct: 869 CTKPRPTCGHKCAAACHEGACPETPCKEL 897

>NU2M_PETMA (Q35535) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 347

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +3

Query: 159 QSSGSFPSLKCFCLLAWFLG--AISDHKSPLLVETETVKI 272
           QS+GS   L   CL AW+ G  AIS    P+++   T+ +
Sbjct: 64  QSAGSATLLITACLTAWYSGNWAISPSNDPIILNAMTLAL 103

>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)|
          Length = 1027

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 118 GRNGGAAPPREAKELSREHQGTSPGFLGLLMIPGARGGK 2
           G  G A P         + QG  PG  GL+ +PG RG K
Sbjct: 529 GATGPAGPTGSPGVAGAKGQGGPPGPAGLVGLPGERGPK 567

>FZD2_HUMAN (Q14332) Frizzled 2 precursor (Frizzled-2) (Fz-2) (hFz2) (FzE2)|
          Length = 565

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
 Frame = -3

Query: 217 PRNQASK----QKHLSDGNEPLLCSWPPTSCSTKCSA---GRNGGAAPPREA 83
           PR+ A +    Q H  DG   LL + PP            G  GG APPR A
Sbjct: 142 PRHGAEQICVGQNHSEDGAPALLTTAPPPGLQPGAGGTPGGPGGGGAPPRYA 193

>PROP_CAVPO (Q64181) Properdin precursor (Factor P)|
          Length = 470

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 122 SRTKWRRCSTEGSQRAQPRTPGNLAWFLGLVDDPWC 15
           S+ + RRC   G Q ++ + PG L W L   ++  C
Sbjct: 96  SQLRHRRCIGWGGQCSENKAPGTLEWQLQACEEQQC 131

>TSSC4_RAT (Q5XIB1) Protein TSSC4|
          Length = 317

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -3

Query: 160 CSWPPTSCSTKCSAGRNGGAAPPRE--AKELSREHQGTSP 47
           CS P TS    CS  R    APP +  A+ LSR H  T P
Sbjct: 106 CSAPQTSVVDNCSFKRP--VAPPSQTPARSLSRVHGNTDP 143

>HAM_DROME (Q8I7Z8) Transcription factor hamlet|
          Length = 990

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 151 PPTSCSTKCSAGRNGGAAPPREAKELSREHQGTSPG 44
           PPTS   + S+   GGA P   A   + +H   + G
Sbjct: 711 PPTSAGGELSSTSEGGAVPTMAAAAFAADHSALASG 746

>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = -1

Query: 240  GIYGPRSHRGTRRASRST*VMEMSRC-SARGRRPAVRRNAQQDEMAALLHRGKPKSSAEN 64
            G  GPR  RG  R SRS          S RGR P      +         RG P+ +AE 
Sbjct: 882  GELGPREERGRPRRSRSKEAPGAPEVRSDRGRGPCPEGGRRHH------RRGSPEEAAE- 934

Query: 63   TREPR 49
             REPR
Sbjct: 935  -REPR 938

>PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-specific|
           proteoglycan core protein) (CSPCP)
          Length = 2333

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
 Frame = -3

Query: 223 IAPRNQASKQKHLSD-GNEPLLC---SWPPTSCSTKCSAGRNGGAAPPREAKELSREHQG 56
           I P NQ   +   S  G  PL     +WPPTS +T+ S     G   P  ++E S   + 
Sbjct: 743 IEPENQTEWEPAYSPAGTSPLPGIPPTWPPTSTATEESTEGPSGTEVPSVSEEPSPSEEP 802

Query: 55  TSPGFLGLLMIPGARG 8
                L  L  PG  G
Sbjct: 803 FPWEELSTLSPPGPSG 818


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,683,806
Number of Sequences: 219361
Number of extensions: 859817
Number of successful extensions: 2863
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2859
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)