Clone Name | bastl24e03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane pro... | 133 | 1e-31 | 2 | AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane pro... | 102 | 2e-22 | 3 | AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane pr... | 95 | 4e-20 |
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>AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) Length = 762 Score = 133 bits (334), Expect = 1e-31 Identities = 65/74 (87%), Positives = 65/74 (87%) Frame = +2 Query: 101 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXXKNGYGDYLIEEEE 280 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTP KNGYGDYLIEEEE Sbjct: 1 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPGAASAAAGAKNGYGDYLIEEEE 60 Query: 281 GLNDHNVVVKCAEI 322 GLNDHNVVVKCAEI Sbjct: 61 GLNDHNVVVKCAEI 74
>AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) Length = 764 Score = 102 bits (254), Expect = 2e-22 Identities = 51/74 (68%), Positives = 57/74 (77%), Gaps = 1/74 (1%) Frame = +2 Query: 104 AILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXX-XXXXKNGYGDYLIEEEE 280 AIL +LGTEILIPVC VIGI FA+ QW +VSKVK++ KNGY DYLIEEEE Sbjct: 3 AILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEE 62 Query: 281 GLNDHNVVVKCAEI 322 G+NDHNVVVKCAEI Sbjct: 63 GINDHNVVVKCAEI 76
>AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane proton pump 1| (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase 1) (H(+)-PPase 1) (Vacuolar proton pyrophosphatase 1) (Vacuolar proton pyrophosphatase 3) Length = 770 Score = 95.1 bits (235), Expect = 4e-20 Identities = 46/81 (56%), Positives = 58/81 (71%), Gaps = 4/81 (4%) Frame = +2 Query: 92 LTAMAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVT----PXXXXXXXXXKNGYGD 259 + A A+L EL TEIL+P+C VIGI F++ QW++VS+VK+T KNGYGD Sbjct: 1 MVAPALLPELWTEILVPICAVIGIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNGYGD 60 Query: 260 YLIEEEEGLNDHNVVVKCAEI 322 YLIEEEEG+ND +VV KCAEI Sbjct: 61 YLIEEEEGVNDQSVVAKCAEI 81 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.140 0.471 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,644,306 Number of Sequences: 219361 Number of extensions: 198192 Number of successful extensions: 441 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 437 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 439 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)