ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl24c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, comp... 52 8e-04
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 52 8e-04
3gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, com... 52 8e-04
4dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic D... 52 8e-04
5dbj|AK068442.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
6gb|AC154455.2| Mus musculus BAC clone RP23-185H13 from 14, compl... 48 0.013
7gb|AC154759.2| Mus musculus BAC clone RP24-408G4 from 14, comple... 48 0.013
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.052
9dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.052
10ref|NM_173579.1| Homo sapiens proline rich 10 (PRR10), mRNA 44 0.20
11gb|BC065255.1| Homo sapiens cDNA clone IMAGE:6137059, partial cds 44 0.20
12dbj|AK097543.1| Homo sapiens cDNA FLJ40224 fis, clone TESTI2022010 44 0.20
13emb|BX935046.2| Gallus gallus finished cDNA, clone ChEST297f13 44 0.20
14gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, co... 44 0.20
15emb|BX935327.1| Gallus gallus finished cDNA, clone ChEST951a4 44 0.20
16emb|BX935298.1| Gallus gallus finished cDNA, clone ChEST957o3 44 0.20
17emb|BX935285.1| Gallus gallus finished cDNA, clone ChEST954b5 44 0.20
18dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.20
19emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus co... 44 0.20
20emb|AL591544.30| Mouse DNA sequence from clone RP23-386D6 on chr... 44 0.20
21gb|AC164875.14| Mus musculus chromosome 1, clone RP23-59P14, com... 44 0.20
22gb|AC107645.28| Mus musculus chromosome 15, clone RP23-78J21, co... 42 0.81
23gb|AC162614.2| Mus musculus chromosome 7, clone RP23-421O10, com... 42 0.81
24gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.81
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.81
26gb|AC166096.2| Mus musculus BAC clone RP24-467F14 from chromosom... 42 0.81
27gb|AC122914.4| Mus musculus BAC clone RP23-26F9 from 15, complet... 42 0.81
28gb|AY340221.1| Mus musculus strain Tsk transforming growth facto... 42 0.81
29gb|AY342403.1| Mus musculus strain C57BL/6 transforming growth f... 42 0.81
30gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 0.81
31dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.81
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.81
33dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.81
34gb|M57902.1|MUSTGFB1 Mus musculus transforming growth factor-bet... 42 0.81
35gb|AC156014.2| Mus musculus BAC clone RP24-439D9 from chromosome... 42 0.81
36ref|XM_346919.2| PREDICTED: Rattus norvegicus LOC360791 (predict... 42 0.81
37gb|AF249327.1|AF249327 Rattus norvegicus TGF-beta 1 gene, promot... 42 0.81
38dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.81
39dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.81
40gb|AF239170.1|AF239170 Rattus norvegicus TGF-beta 1 gene, promot... 42 0.81
41dbj|AK073065.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.81
42dbj|AK067927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.81
43gb|AF105069.1|AF105069 Rattus norvegicus transforming growth fac... 42 0.81
44gb|AF015683.1|AF015683 Rattus norvegicus transforming growth fac... 42 0.81
45gb|L42456.1|MUSTGF1G01 Mus musculus TGF-1 gene, promoter region ... 42 0.81
46emb|AL713871.8| Mouse DNA sequence from clone RP23-40P1 on chrom... 42 0.81
47emb|AL669828.13| Mouse DNA sequence from clone RP23-163J20 on ch... 42 0.81
48emb|AL732463.7| Mouse DNA sequence from clone RP23-216N18 on chr... 42 0.81
49gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 3.2
50ref|XM_472436.1| Oryza sativa (japonica cultivar-group), predic... 40 3.2
51ref|NM_190119.1| Oryza sativa (japonica cultivar-group), predic... 40 3.2
52ref|NM_003501.1| Homo sapiens acyl-Coenzyme A oxidase 3, pristan... 40 3.2
53gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 40 3.2
54gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome... 40 3.2
55ref|XM_414540.1| PREDICTED: Gallus gallus similar to Vesicular i... 40 3.2
56ref|XM_420639.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 40 3.2
57gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 3.2
58gb|AC126272.3| Mus musculus BAC clone RP23-48P22 from chromosome... 40 3.2
59ref|XM_537639.2| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 3.2
60ref|XM_855764.1| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 3.2
61ref|XM_855706.1| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 3.2
62ref|XM_855672.1| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 3.2
63ref|XM_855539.1| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 3.2
64ref|XM_855508.1| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 3.2
65gb|AC126444.3| Mus musculus BAC clone RP24-136A8 from chromosome... 40 3.2
66gb|AE014075.1| Escherichia coli CFT073, complete genome 40 3.2
67gb|CP000243.1| Escherichia coli UTI89, complete genome 40 3.2
68emb|BX323845.6| Human DNA sequence from clone RP11-272G22 on chr... 40 3.2
69emb|AL596275.10| Human DNA sequence from clone RP11-183G22 on ch... 40 3.2
70emb|AL354861.11| Human DNA sequence from clone RP11-180I4 on chr... 40 3.2
71gb|AC096510.11| Homo sapiens X BAC RP11-449M18 (Roswell Park Can... 40 3.2
72emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19... 40 3.2
73emb|Y11411.1|HSPRCOX H.sapiens mRNA for pristanoyl-CoA oxidase 40 3.2
74emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4,... 40 3.2
75gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic... 40 3.2
76gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, comp... 40 3.2
77gb|AC104333.2| Homo sapiens chromosome 1 clone RP11-348H3, compl... 40 3.2
78ref|XM_678296.1| PREDICTED: Danio rerio similar to Midasin (MIDA... 40 3.2
79gb|AC158525.2| Mus musculus BAC clone RP23-367E3 from chromosome... 40 3.2
80emb|CR388896.1| Gallus gallus finished cDNA, clone ChEST170c17 40 3.2
81gb|AC023906.7|AC023906 Homo sapiens chromosome 15 clone CTD-2184... 40 3.2
82dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
83dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
84dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
85dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
86gb|AC157580.5| Mus musculus chromosome 15, clone RP24-82M3, comp... 40 3.2
87dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
88gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 3.2
89gb|AC090669.9| Homo sapiens 12 BAC RP11-780K2 (Roswell Park Canc... 40 3.2
90dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
91dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 3.2
92dbj|AP003854.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
93dbj|AP003220.6| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
94dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
95dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
96dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
97dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
98dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
99dbj|AK121850.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.2
100dbj|AK121989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.2
101gb|AC000063.1|HUMLUCA19 Human cosmid clone LUCA19 from 3p21.3, c... 40 3.2
102dbj|AK103098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.2
103dbj|AK065015.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.2
104emb|BX255904.6| Zebrafish DNA sequence from clone DKEY-15J16 in ... 40 3.2
105dbj|AK063425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.2
106emb|AL359397.3|CNS05TE2 Human chromosome 14 DNA sequence BAC R-2... 40 3.2
107gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.2
108gb|AC004693.1|AC004693 Homo sapiens cosmid clone LUCA20 from 3p2... 40 3.2
109emb|AL844550.5| Mouse DNA sequence from clone RP23-277K21 on chr... 40 3.2
110gb|CP000036.1| Shigella boydii Sb227, complete genome 40 3.2 
>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence
          Length = 148054

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 27    ggcctccccatctcctcctccctccc 52
             ||||||||||||||||||||||||||
Sbjct: 79004 ggcctccccatctcctcctccctccc 78979
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 114    gatgagctcgtcggcatcgaggagggaggcggcg 147
              ||||||||||||| | ||||||||||||||||||
Sbjct: 912683 gatgagctcgtcgacctcgaggagggaggcggcg 912716



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 127      gcatcgaggagggaggcggc 146
                ||||||||||||||||||||
Sbjct: 19148352 gcatcgaggagggaggcggc 19148333



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 226      gagctgctgcccaagggcgg 245
                ||||||||||||||||||||
Sbjct: 13188460 gagctgctgcccaagggcgg 13188479
to top
>gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, complete sequence
          Length = 115368

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 27    ggcctccccatctcctcctccctccc 52
             ||||||||||||||||||||||||||
Sbjct: 55580 ggcctccccatctcctcctccctccc 55555
to top
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0019F11
          Length = 123673

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 114   gatgagctcgtcggcatcgaggagggaggcggcg 147
             ||||||||||||| | ||||||||||||||||||
Sbjct: 93578 gatgagctcgtcgacctcgaggagggaggcggcg 93611
to top
>dbj|AK068442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157I02, full
           insert sequence
          Length = 3029

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 114 gatgagctcgtcggcatcgaggagggaggcggcg 147
           ||||||||||||| | ||||||||||||||||||
Sbjct: 258 gatgagctcgtcgacctcgaggagggaggcggcg 291
to top
>gb|AC154455.2| Mus musculus BAC clone RP23-185H13 from 14, complete sequence
          Length = 215308

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 200   ctgcccccgccccggcgcggagcgggga 227
             ||||| ||||||||||||||||||||||
Sbjct: 44672 ctgccgccgccccggcgcggagcgggga 44645
to top
>gb|AC154759.2| Mus musculus BAC clone RP24-408G4 from 14, complete sequence
          Length = 145942

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 200   ctgcccccgccccggcgcggagcgggga 227
             ||||| ||||||||||||||||||||||
Sbjct: 37984 ctgccgccgccccggcgcggagcgggga 38011
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 38       ctcctcctccctcccgcccgcct 60
                |||||||||||||||||||||||
Sbjct: 16466638 ctcctcctccctcccgcccgcct 16466616



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 29       cctccccatctcctcctccc 48
                ||||||||||||||||||||
Sbjct: 24238802 cctccccatctcctcctccc 24238783
to top
>dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0527E02
          Length = 176826

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 38    ctcctcctccctcccgcccgcct 60
             |||||||||||||||||||||||
Sbjct: 40053 ctcctcctccctcccgcccgcct 40031
to top
>ref|NM_173579.1| Homo sapiens proline rich 10 (PRR10), mRNA
          Length = 1769

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 132 gaggagggaggcggcgaggagc 153
           ||||||||||||||||||||||
Sbjct: 502 gaggagggaggcggcgaggagc 523
to top
>gb|BC065255.1| Homo sapiens cDNA clone IMAGE:6137059, partial cds
          Length = 2076

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 132 gaggagggaggcggcgaggagc 153
           ||||||||||||||||||||||
Sbjct: 50  gaggagggaggcggcgaggagc 29
to top
>dbj|AK097543.1| Homo sapiens cDNA FLJ40224 fis, clone TESTI2022010
          Length = 1769

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 132 gaggagggaggcggcgaggagc 153
           ||||||||||||||||||||||
Sbjct: 502 gaggagggaggcggcgaggagc 523
to top
>emb|BX935046.2| Gallus gallus finished cDNA, clone ChEST297f13
          Length = 1065

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 225 ggagctgctgcccaagggcggc 246
           ||||||||||||||||||||||
Sbjct: 44  ggagctgctgcccaagggcggc 65
to top
>gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, complete sequence
          Length = 155376

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 21    agcccaggcctccccatctcct 42
             ||||||||||||||||||||||
Sbjct: 81014 agcccaggcctccccatctcct 81035
to top
>emb|BX935327.1| Gallus gallus finished cDNA, clone ChEST951a4
          Length = 1168

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 225 ggagctgctgcccaagggcggc 246
           ||||||||||||||||||||||
Sbjct: 77  ggagctgctgcccaagggcggc 98
to top
>emb|BX935298.1| Gallus gallus finished cDNA, clone ChEST957o3
          Length = 1168

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 225 ggagctgctgcccaagggcggc 246
           ||||||||||||||||||||||
Sbjct: 77  ggagctgctgcccaagggcggc 98
to top
>emb|BX935285.1| Gallus gallus finished cDNA, clone ChEST954b5
          Length = 1168

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 225 ggagctgctgcccaagggcggc 246
           ||||||||||||||||||||||
Sbjct: 77  ggagctgctgcccaagggcggc 98
to top
>dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-688I9, complete
              sequence
          Length = 175562

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 132    gaggagggaggcggcgaggagc 153
              ||||||||||||||||||||||
Sbjct: 152310 gaggagggaggcggcgaggagc 152331
to top
>emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus constant region and partial
              variable region, strain 129/Sv
          Length = 1382053

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 31     tccccatctcctcctccctccc 52
              ||||||||||||||||||||||
Sbjct: 545753 tccccatctcctcctccctccc 545774
to top
>emb|AL591544.30| Mouse DNA sequence from clone RP23-386D6 on chromosome 11, complete
             sequence
          Length = 201673

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 31    tccccatctcctcctccctccc 52
             ||||||||||||||||||||||
Sbjct: 63311 tccccatctcctcctccctccc 63332
to top
>gb|AC164875.14| Mus musculus chromosome 1, clone RP23-59P14, complete sequence
          Length = 250957

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 30     ctccccatctcctcctccctcc 51
              ||||||||||||||||||||||
Sbjct: 157936 ctccccatctcctcctccctcc 157957
to top
>gb|AC107645.28| Mus musculus chromosome 15, clone RP23-78J21, complete sequence
          Length = 240912

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     ccccatctcctcctccctccc 52
              |||||||||||||||||||||
Sbjct: 228616 ccccatctcctcctccctccc 228596
to top
>gb|AC162614.2| Mus musculus chromosome 7, clone RP23-421O10, complete sequence
          Length = 219414

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 185   gccctccccctaggcctgcccccgccccg 213
             ||||||||||| || ||||||||||||||
Sbjct: 86817 gccctccccctggggctgcccccgccccg 86789
to top
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06,
             complete sequence
          Length = 142068

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    tccccatctcctcctccctcc 51
             |||||||||||||||||||||
Sbjct: 90463 tccccatctcctcctccctcc 90443
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 27       ggcctccccatctcctcctcc 47
                |||||||||||||||||||||
Sbjct: 10577303 ggcctccccatctcctcctcc 10577323



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 128      catcgaggagggaggcggcg 147
                ||||||||||||||||||||
Sbjct: 30429658 catcgaggagggaggcggcg 30429677
to top
>gb|AC166096.2| Mus musculus BAC clone RP24-467F14 from chromosome 9, complete sequence
          Length = 142142

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    ccccatctcctcctccctccc 52
             |||||||||||||||||||||
Sbjct: 84611 ccccatctcctcctccctccc 84631
to top
>gb|AC122914.4| Mus musculus BAC clone RP23-26F9 from 15, complete sequence
          Length = 207417

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 32     ccccatctcctcctccctccc 52
              |||||||||||||||||||||
Sbjct: 146121 ccccatctcctcctccctccc 146141
to top
>gb|AY340221.1| Mus musculus strain Tsk transforming growth factor-beta 1 (Tgfb1)
            gene, promoters 1 and 2 and partial cds
          Length = 2717

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 185  gccctccccctaggcctgcccccgccccg 213
            ||||||||||| || ||||||||||||||
Sbjct: 1760 gccctccccctggggctgcccccgccccg 1788
to top
>gb|AY342403.1| Mus musculus strain C57BL/6 transforming growth factor-beta 1 (Tgfb1)
            gene, promoter 1 and 2 and partial cds
          Length = 2717

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 185  gccctccccctaggcctgcccccgccccg 213
            ||||||||||| || ||||||||||||||
Sbjct: 1760 gccctccccctggggctgcccccgccccg 1788
to top
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0036G02, from chromosome 3, complete sequence
          Length = 153308

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 27     ggcctccccatctcctcctcc 47
              |||||||||||||||||||||
Sbjct: 133116 ggcctccccatctcctcctcc 133136
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 33       cccatctcctcctccctcccg 53
                |||||||||||||||||||||
Sbjct: 16321912 cccatctcctcctccctcccg 16321892



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 132      gaggagggaggcggcgaggagcgg 155
                ||||||||||||||||| ||||||
Sbjct: 12498284 gaggagggaggcggcgacgagcgg 12498307
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 31       tccccatctcctcctccctcc 51
                |||||||||||||||||||||
Sbjct: 25355859 tccccatctcctcctccctcc 25355839
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 27       ggcctccccatctcctcctcc 47
                |||||||||||||||||||||
Sbjct: 10575404 ggcctccccatctcctcctcc 10575424



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 128      catcgaggagggaggcggcg 147
                ||||||||||||||||||||
Sbjct: 30521080 catcgaggagggaggcggcg 30521099
to top
>gb|M57902.1|MUSTGFB1 Mus musculus transforming growth factor-beta 1 (TGF-beta-1) gene,
            promoters 1 and 2 and partial cds
          Length = 2716

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 185  gccctccccctaggcctgcccccgccccg 213
            ||||||||||| || ||||||||||||||
Sbjct: 1760 gccctccccctggggctgcccccgccccg 1788
to top
>gb|AC156014.2| Mus musculus BAC clone RP24-439D9 from chromosome 16, complete sequence
          Length = 194272

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    ccccatctcctcctccctccc 52
             |||||||||||||||||||||
Sbjct: 82121 ccccatctcctcctccctccc 82141
to top
>ref|XM_346919.2| PREDICTED: Rattus norvegicus LOC360791 (predicted) (LOC360791), mRNA
          Length = 2219

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 207  cgccccggcgcggagcgggga 227
            |||||||||||||||||||||
Sbjct: 1242 cgccccggcgcggagcgggga 1222
to top
>gb|AF249327.1|AF249327 Rattus norvegicus TGF-beta 1 gene, promoter sequence
          Length = 4595

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 185  gccctccccctaggcctgcccccgccccg 213
            ||||||||||| || ||||||||||||||
Sbjct: 3825 gccctccccctggggctgcccccgccccg 3853
to top
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0046G12
          Length = 189391

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    cccatctcctcctccctcccg 53
             |||||||||||||||||||||
Sbjct: 10459 cccatctcctcctccctcccg 10439
to top
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1344_B01
          Length = 170912

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 33     cccatctcctcctccctcccg 53
              |||||||||||||||||||||
Sbjct: 138428 cccatctcctcctccctcccg 138408
to top
>gb|AF239170.1|AF239170 Rattus norvegicus TGF-beta 1 gene, promoter sequence
          Length = 1608

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 185  gccctccccctaggcctgcccccgccccg 213
            ||||||||||| || ||||||||||||||
Sbjct: 1464 gccctccccctggggctgcccccgccccg 1492
to top
>dbj|AK073065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020F05, full
           insert sequence
          Length = 1734

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 31  tccccatctcctcctccctcc 51
           |||||||||||||||||||||
Sbjct: 190 tccccatctcctcctccctcc 170
to top
>dbj|AK067927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127F13, full
           insert sequence
          Length = 2616

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 31  tccccatctcctcctccctcc 51
           |||||||||||||||||||||
Sbjct: 325 tccccatctcctcctccctcc 305
to top
>gb|AF105069.1|AF105069 Rattus norvegicus transforming growth factor beta-1 gene, partial
           cds
          Length = 1300

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 185 gccctccccctaggcctgcccccgccccg 213
           ||||||||||| || ||||||||||||||
Sbjct: 274 gccctccccctggggctgcccccgccccg 302
to top
>gb|AF015683.1|AF015683 Rattus norvegicus transforming growth factor beta 1 gene, promoter
           and partial exon 1
          Length = 628

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 185 gccctccccctaggcctgcccccgccccg 213
           ||||||||||| || ||||||||||||||
Sbjct: 276 gccctccccctggggctgcccccgccccg 304
to top
>gb|L42456.1|MUSTGF1G01 Mus musculus TGF-1 gene, promoter region and exon 1
          Length = 5531

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 185  gccctccccctaggcctgcccccgccccg 213
            ||||||||||| || ||||||||||||||
Sbjct: 3938 gccctccccctggggctgcccccgccccg 3966
to top
>emb|AL713871.8| Mouse DNA sequence from clone RP23-40P1 on chromosome X, complete
              sequence
          Length = 230701

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 32     ccccatctcctcctccctccc 52
              |||||||||||||||||||||
Sbjct: 201397 ccccatctcctcctccctccc 201417
to top
>emb|AL669828.13| Mouse DNA sequence from clone RP23-163J20 on chromosome 2, complete
              sequence
          Length = 248940

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 23     cccaggcctccccatctcctcctccctcc 51
              |||||| || |||||||||||||||||||
Sbjct: 246015 cccaggtctgcccatctcctcctccctcc 246043
to top
>emb|AL732463.7| Mouse DNA sequence from clone RP23-216N18 on chromosome X, complete
             sequence
          Length = 158239

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    ccccatctcctcctccctccc 52
             |||||||||||||||||||||
Sbjct: 68203 ccccatctcctcctccctccc 68183
to top
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     cgccccggcgcggagcgggg 226
               ||||||||||||||||||||
Sbjct: 3713793 cgccccggcgcggagcgggg 3713812
to top
>ref|XM_472436.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 927

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 40  cctcctccctcccgcccgcc 59
           ||||||||||||||||||||
Sbjct: 626 cctcctccctcccgcccgcc 645
to top
>ref|NM_190119.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2322

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 catcgaggagggaggcggcg 147
           ||||||||||||||||||||
Sbjct: 66  catcgaggagggaggcggcg 85
to top
>ref|NM_003501.1| Homo sapiens acyl-Coenzyme A oxidase 3, pristanoyl (ACOX3), mRNA
          Length = 2415

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 43   cctccctcccgcccgcctgggcaa 66
            ||||||||||| ||||||||||||
Sbjct: 2342 cctccctcccgtccgcctgggcaa 2319
to top
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0063D09 map S1559, complete sequence
          Length = 190721

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    cccatctcctcctccctccc 52
             ||||||||||||||||||||
Sbjct: 45480 cccatctcctcctccctccc 45461
to top
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0005H02,
              complete sequence
          Length = 144882

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     cccatctcctcctccctccc 52
              ||||||||||||||||||||
Sbjct: 108502 cccatctcctcctccctccc 108483
to top
>ref|XM_414540.1| PREDICTED: Gallus gallus similar to Vesicular integral-membrane
            protein VIP36 precursor (Lectin, mannose-binding 2)
            (LOC416217), mRNA
          Length = 1209

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 133  aggagggaggcggcgaggagcggg 156
            ||||||||||||||| ||||||||
Sbjct: 1117 aggagggaggcggcgcggagcggg 1140
to top
>ref|XM_420639.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 9330196J05
           (LOC422687), mRNA
          Length = 4062

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 40  cctcctccctcccgcccgcc 59
           ||||||||||||||||||||
Sbjct: 483 cctcctccctcccgcccgcc 502
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 225     ggagctgctgcccaagggcg 244
               ||||||||||||||||||||
Sbjct: 4254153 ggagctgctgcccaagggcg 4254134
to top
>gb|AC126272.3| Mus musculus BAC clone RP23-48P22 from chromosome 14, complete sequence
          Length = 191606

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    cctccccatctcctcctccctccc 52
             |||||||||||||| |||||||||
Sbjct: 56934 cctccccatctccttctccctccc 56957
to top
>ref|XM_537639.2| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
           subfamily C, member 7, transcript variant 2 (LOC480519),
           mRNA
          Length = 2025

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gcccccgccccggcgcggag 221
           ||||||||||||||||||||
Sbjct: 37  gcccccgccccggcgcggag 56
to top
>ref|XM_855764.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
           subfamily C, member 7, transcript variant 11
           (LOC480519), mRNA
          Length = 1956

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gcccccgccccggcgcggag 221
           ||||||||||||||||||||
Sbjct: 6   gcccccgccccggcgcggag 25
to top
>ref|XM_855706.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
           subfamily C, member 7, transcript variant 9 (LOC480519),
           mRNA
          Length = 1423

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gcccccgccccggcgcggag 221
           ||||||||||||||||||||
Sbjct: 6   gcccccgccccggcgcggag 25
to top
>ref|XM_855672.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
           subfamily C, member 7, transcript variant 8 (LOC480519),
           mRNA
          Length = 1449

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gcccccgccccggcgcggag 221
           ||||||||||||||||||||
Sbjct: 6   gcccccgccccggcgcggag 25
to top
>ref|XM_855539.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
           subfamily C, member 7, transcript variant 4 (LOC480519),
           mRNA
          Length = 1617

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gcccccgccccggcgcggag 221
           ||||||||||||||||||||
Sbjct: 6   gcccccgccccggcgcggag 25
to top
>ref|XM_855508.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
           subfamily C, member 7, transcript variant 3 (LOC480519),
           mRNA
          Length = 1464

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gcccccgccccggcgcggag 221
           ||||||||||||||||||||
Sbjct: 6   gcccccgccccggcgcggag 25
to top
>gb|AC126444.3| Mus musculus BAC clone RP24-136A8 from chromosome 14, complete sequence
          Length = 141017

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     cctccccatctcctcctccctccc 52
              |||||||||||||| |||||||||
Sbjct: 125769 cctccccatctccttctccctccc 125792
to top
>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     cgccccggcgcggagcgggg 226
               ||||||||||||||||||||
Sbjct: 4169763 cgccccggcgcggagcgggg 4169782
to top
>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     cgccccggcgcggagcgggg 226
               ||||||||||||||||||||
Sbjct: 3997982 cgccccggcgcggagcgggg 3998001
to top
>emb|BX323845.6| Human DNA sequence from clone RP11-272G22 on chromosome X Contains a
             pseudogene similar to part of
             6-phosphofructo-2-kinase/fructose-2 6-biphosphatase 1
             (PFKFB1), a pseudogene similar to part of ribosomal
             protein S13 (RPS13) and a mitochondrial ribosomal protein
             L32 (MRPL32) pseudogene, complete sequence
          Length = 86141

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    cctccccatctcctcctccctccc 52
             ||||||||||| ||||||||||||
Sbjct: 31663 cctccccatcttctcctccctccc 31686
to top
>emb|AL596275.10| Human DNA sequence from clone RP11-183G22 on chromosome 1 Contains a
             ribosomal protein S2 (RPS2) pseudogene, a high-mobility
             group box 1 (HMGB1) pseudogene and a chromosome 14 open
             reading frame 111 (C14orf111) pseudogene, complete
             sequence
          Length = 139273

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    ccccatctcctcctccctcc 51
             ||||||||||||||||||||
Sbjct: 67967 ccccatctcctcctccctcc 67986
to top
>emb|AL354861.11| Human DNA sequence from clone RP11-180I4 on chromosome 9 Contains an
              alpha type 7 proteasome subunit (PSMA7) pseudogene, the 3'
              end of a novel gene, a novel gene and a CpG island,
              complete sequence
          Length = 182653

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     ctccccatctcctcctccct 49
              ||||||||||||||||||||
Sbjct: 115978 ctccccatctcctcctccct 115959
to top
>gb|AC096510.11| Homo sapiens X BAC RP11-449M18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 25803

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   gaggagcggggagctcgggc 166
             ||||||||||||||||||||
Sbjct: 23396 gaggagcggggagctcgggc 23415
to top
>emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19 on chromosome 22q13.1,
             complete sequence
          Length = 114771

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    cccatctcctcctccctccc 52
             ||||||||||||||||||||
Sbjct: 81929 cccatctcctcctccctccc 81948
to top
>emb|Y11411.1|HSPRCOX H.sapiens mRNA for pristanoyl-CoA oxidase
          Length = 2415

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 43   cctccctcccgcccgcctgggcaa 66
            ||||||||||| ||||||||||||
Sbjct: 2342 cctccctcccgtccgcctgggcaa 2319
to top
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16,
             complete sequence
          Length = 114051

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    cctcctccctcccgcccgcc 59
             ||||||||||||||||||||
Sbjct: 68613 cctcctccctcccgcccgcc 68632
to top
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete
             sequence
          Length = 149380

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   catcgaggagggaggcggcg 147
             ||||||||||||||||||||
Sbjct: 47357 catcgaggagggaggcggcg 47338
to top
>gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, complete sequence
          Length = 217337

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 37    tctcctcctccctcccgcccgcct 60
             ||||||||||||||||||| ||||
Sbjct: 18774 tctcctcctccctcccgcctgcct 18751
to top
>gb|AC104333.2| Homo sapiens chromosome 1 clone RP11-348H3, complete sequence
          Length = 162984

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     ccccatctcctcctccctcc 51
              ||||||||||||||||||||
Sbjct: 137906 ccccatctcctcctccctcc 137887
to top
>ref|XM_678296.1| PREDICTED: Danio rerio similar to Midasin (MIDAS-containing protein)
            (LOC555704), mRNA
          Length = 11575

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   cctccccatctcctcctccc 48
            ||||||||||||||||||||
Sbjct: 8074 cctccccatctcctcctccc 8055
to top
>gb|AC158525.2| Mus musculus BAC clone RP23-367E3 from chromosome 14, complete sequence
          Length = 179650

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     cctccccatctcctcctccctccc 52
              ||||||| ||||||||||||||||
Sbjct: 149168 cctccccctctcctcctccctccc 149191
to top
>emb|CR388896.1| Gallus gallus finished cDNA, clone ChEST170c17
          Length = 909

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  tcctcctccctcccgcccgc 58
           ||||||||||||||||||||
Sbjct: 252 tcctcctccctcccgcccgc 271
to top
>gb|AC023906.7|AC023906 Homo sapiens chromosome 15 clone CTD-2184D3 map 15q21.2, complete
             sequence
          Length = 93287

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    cccatctcctcctccctccc 52
             ||||||||||||||||||||
Sbjct: 71677 cccatctcctcctccctccc 71658



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    cccatctcctcctccctccc 52
             ||||||||||||||||||||
Sbjct: 71622 cccatctcctcctccctccc 71603



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    cccatctcctcctccctccc 52
             ||||||||||||||||||||
Sbjct: 71605 cccatctcctcctccctccc 71586



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    cccatctcctcctccctccc 52
             ||||||||||||||||||||
Sbjct: 71588 cccatctcctcctccctccc 71569
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 40       cctcctccctcccgcccgcc 59
                ||||||||||||||||||||
Sbjct: 20634179 cctcctccctcccgcccgcc 20634198
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       cccatctcctcctccctccc 52
                ||||||||||||||||||||
Sbjct: 19530923 cccatctcctcctccctccc 19530904



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 33      cccatctcctcctccctccc 52
               ||||||||||||||||||||
Sbjct: 3677808 cccatctcctcctccctccc 3677789
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 35       catctcctcctccctcccgcccgc 58
                |||||||||||||||||| |||||
Sbjct: 18465968 catctcctcctccctccctcccgc 18465945
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 128      catcgaggagggaggcggcg 147
                ||||||||||||||||||||
Sbjct: 38011516 catcgaggagggaggcggcg 38011535



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 36       atctcctcctccctcccgcccgcc 59
                ||||||||||||||||| ||||||
Sbjct: 25223149 atctcctcctccctccctcccgcc 25223172



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 29       cctccccatctcctcctccctccc 52
                ||||||||| ||||||||||||||
Sbjct: 16068722 cctccccatgtcctcctccctccc 16068745
to top
>gb|AC157580.5| Mus musculus chromosome 15, clone RP24-82M3, complete sequence
          Length = 207974

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     cccatctcctcctccctccc 52
              ||||||||||||||||||||
Sbjct: 173142 cccatctcctcctccctccc 173161
to top
>dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1158C05
          Length = 145514

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    atctcctcctccctcccgcccgcc 59
             ||||||||||||||||| ||||||
Sbjct: 20193 atctcctcctccctccctcccgcc 20216
to top
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 207     cgccccggcgcggagcgggg 226
               ||||||||||||||||||||
Sbjct: 4061425 cgccccggcgcggagcgggg 4061406
to top
>gb|AC090669.9| Homo sapiens 12 BAC RP11-780K2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 113027

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    cctccccatctcctcctccctccc 52
             ||||||| ||||||||||||||||
Sbjct: 34149 cctccccctctcctcctccctccc 34172



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    cctccccatctcctcctccctccc 52
             ||||||| ||||||||||||||||
Sbjct: 34131 cctccccctctcctcctccctccc 34154



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    cctccccatctcctcctccctccc 52
             ||||||| ||||||||||||||||
Sbjct: 34113 cctccccctctcctcctccctccc 34136



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    cctccccatctcctcctccctccc 52
             ||||||| ||||||||||||||||
Sbjct: 34095 cctccccctctcctcctccctccc 34118



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    cctccccatctcctcctccctccc 52
             ||||||| ||||||||||||||||
Sbjct: 34077 cctccccctctcctcctccctccc 34100
to top
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0698A10
          Length = 137348

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   catcgaggagggaggcggcg 147
             ||||||||||||||||||||
Sbjct: 92460 catcgaggagggaggcggcg 92479
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 221     gcggggagctgctgcccaagggcg 244
               |||| |||||||||||||||||||
Sbjct: 4046312 gcggcgagctgctgcccaagggcg 4046289
to top
>dbj|AP003854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0093M23
          Length = 134578

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    cctccccatctcctcctccctccc 52
             ||||||||| ||||||||||||||
Sbjct: 24885 cctccccatgtcctcctccctccc 24908
to top
>dbj|AP003220.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0035I14
          Length = 117919

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    atctcctcctccctcccgcccgcc 59
             ||||||||||||||||| ||||||
Sbjct: 89158 atctcctcctccctccctcccgcc 89181
to top
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0012F14
          Length = 168629

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    gagctgctgcccaagggcgg 245
              ||||||||||||||||||||
Sbjct: 105648 gagctgctgcccaagggcgg 105667
to top
>dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0043B22
          Length = 158857

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   gcatcgaggagggaggcggc 146
             ||||||||||||||||||||
Sbjct: 51837 gcatcgaggagggaggcggc 51818
to top
>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_B11
          Length = 102824

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    catctcctcctccctcccgcccgc 58
             |||||||||||||||||| |||||
Sbjct: 57816 catctcctcctccctccctcccgc 57793
to top
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0711A01
          Length = 162400

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 132   gaggagggaggcggcgaggagcgg 155
             ||||||||||||||||| ||||||
Sbjct: 13611 gaggagggaggcggcgacgagcgg 13634
to top
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ2055_H10
          Length = 119290

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    cctccccatctcctcctccc 48
             ||||||||||||||||||||
Sbjct: 39190 cctccccatctcctcctccc 39171
to top
>dbj|AK121850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101L24, full
           insert sequence
          Length = 1630

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 35  catctcctcctccctcccgcccgc 58
           |||||||||||||||||| |||||
Sbjct: 158 catctcctcctccctccctcccgc 135
to top
>dbj|AK121989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109C03, full
           insert sequence
          Length = 1277

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 gagctgctgcccaagggcgg 245
           ||||||||||||||||||||
Sbjct: 318 gagctgctgcccaagggcgg 337
to top
>gb|AC000063.1|HUMLUCA19 Human cosmid clone LUCA19 from 3p21.3, complete sequence
          Length = 34478

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 37    tctcctcctccctcccgcccgcct 60
             ||||||||||||||||||| ||||
Sbjct: 34320 tctcctcctccctcccgcctgcct 34297
to top
>dbj|AK103098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118M16, full
           insert sequence
          Length = 2391

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 36  atctcctcctccctcccgcccgcc 59
           ||||||||||||||||| ||||||
Sbjct: 170 atctcctcctccctccctcccgcc 193
to top
>dbj|AK065015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F10, full
           insert sequence
          Length = 1818

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ggaggcggcgaggagcggggagct 161
           |||||||||||||||||| |||||
Sbjct: 99  ggaggcggcgaggagcggcgagct 76
to top
>emb|BX255904.6| Zebrafish DNA sequence from clone DKEY-15J16 in linkage group 20,
              complete sequence
          Length = 228691

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     cctccccatctcctcctccc 48
              ||||||||||||||||||||
Sbjct: 211655 cctccccatctcctcctccc 211674
to top
>dbj|AK063425.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-C11, full
           insert sequence
          Length = 2508

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  tccccatctcctcctccctc 50
           ||||||||||||||||||||
Sbjct: 153 tccccatctcctcctccctc 134
to top
>emb|AL359397.3|CNS05TE2 Human chromosome 14 DNA sequence BAC R-247L20 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168193

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    ctccccatctcctcctccct 49
             ||||||||||||||||||||
Sbjct: 69972 ctccccatctcctcctccct 69991
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       cccatctcctcctccctccc 52
                ||||||||||||||||||||
Sbjct: 19693399 cccatctcctcctccctccc 19693380



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 33      cccatctcctcctccctccc 52
               ||||||||||||||||||||
Sbjct: 3686502 cccatctcctcctccctccc 3686483
to top
>gb|AC004693.1|AC004693 Homo sapiens cosmid clone LUCA20 from 3p21.3, complete sequence
          Length = 27700

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 37 tctcctcctccctcccgcccgcct 60
          ||||||||||||||||||| ||||
Sbjct: 42 tctcctcctccctcccgcctgcct 19
to top
>emb|AL844550.5| Mouse DNA sequence from clone RP23-277K21 on chromosome 2, complete
             sequence
          Length = 118080

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    cccatctcctcctccctccc 52
             ||||||||||||||||||||
Sbjct: 88323 cccatctcctcctccctccc 88304
to top
>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     cgccccggcgcggagcgggg 226
               ||||||||||||||||||||
Sbjct: 3581231 cgccccggcgcggagcgggg 3581250


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,171,218
Number of Sequences: 3902068
Number of extensions: 2171218
Number of successful extensions: 69950
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68411
Number of HSP's gapped (non-prelim): 1539
length of query: 248
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 226
effective length of database: 17,147,199,772
effective search space: 3875267148472
effective search space used: 3875267148472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top