ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl24b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450769.1| Oryza sativa (japonica cultivar-group), mRNA 299 4e-78
2dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 4e-78
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 287 1e-74
4dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D... 287 1e-74
5dbj|AK099796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 2e-70
6dbj|AK100624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 2e-70
7gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 254 2e-64
8gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome... 182 6e-43
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 182 6e-43
10dbj|AK120403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 6e-43
11dbj|AK065584.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 6e-43
12ref|NM_100834.3| Arabidopsis thaliana ATP binding / leucine-tRNA... 58 2e-05
13gb|AY056261.1| Arabidopsis thaliana At1g09620 mRNA sequence 58 2e-05
14gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis tha... 58 2e-05
15ref|XM_606600.2| PREDICTED: Bos taurus similar to nuclear recept... 46 0.091
16ref|XM_880610.1| PREDICTED: Bos taurus similar to nuclear recept... 46 0.091
17ref|XM_880589.1| PREDICTED: Bos taurus similar to nuclear recept... 46 0.091
18ref|XM_880568.1| PREDICTED: Bos taurus similar to nuclear recept... 46 0.091
19ref|XM_880549.1| PREDICTED: Bos taurus similar to nuclear recept... 46 0.091
20gb|AC074264.3| Homo sapiens BAC clone RP11-410L9 from 2, complet... 42 1.4
21gb|U77484.1|RNGZAL3 Rattus norvegicus guanine nucleotide-binding... 42 1.4
22ref|NM_013189.1| Rattus norvegicus guanine nucleotide binding pr... 42 1.4
23gb|AY247648.1| Spirochaeta thermophila strain Z-1203 DNA polymer... 40 5.6
24gb|AC127951.4| Rattus norvegicus 18 BAC CH230-150D9 (Children's ... 40 5.6
25ref|XM_653129.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 5.6
26gb|AC096226.12| Rattus norvegicus 18 BAC CH230-26M18 (Children's... 40 5.6
27emb|AL121984.14|HSA277C14 Human DNA sequence from clone RP11-277... 40 5.6
28gb|AC157893.2| Medicago truncatula chromosome 7 BAC clone mth2-7... 40 5.6
29gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complet... 40 5.6
30gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complet... 40 5.6 
>ref|XM_450769.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3772

 Score =  299 bits (151), Expect = 4e-78
 Identities = 306/355 (86%), Gaps = 2/355 (0%)
 Strand = Plus / Plus

                                                                       
Query: 43  gctgcggctccc-tgcctcgcgcgccgtcgtcaggaaaatgtcgtcaagtactgatggag 101
           |||||||||||| ||||| |||||||  |||||||||||||||||||| | |||||||||
Sbjct: 97  gctgcggctcccctgcct-gcgcgccaccgtcaggaaaatgtcgtcaaatcctgatggag 155

                                                                       
Query: 102 ccaagagtcatgcacgtagagaccttttgctcaagatccaatcagaagctcaaacatgtt 161
            ||  |||  ||| || ||||| |  || ||||| ||||||||||| | ||| |  |  |
Sbjct: 156 gcagaagttttgctcggagagatcaattactcaatatccaatcagatgttcacaagttat 215

                                                                       
Query: 162 gggaggagagcaaggtttttgaggctgaacctggcaatggacttcctggccctggtgaaa 221
           |||||||| ||||||||||||||||||||||||| | |   |  || |||||||| ||||
Sbjct: 216 gggaggagggcaaggtttttgaggctgaacctgggagtaagccaccaggccctggggaaa 275

                                                                       
Query: 222 aattctttggcaattttccgtacccttacatgaatggacttctacatttggggcatgcct 281
           ||||||||||||||||||| |||||||||||||| ||  | ||||||||||| |||||||
Sbjct: 276 aattctttggcaattttccatacccttacatgaacggcttgctacatttgggccatgcct 335

                                                                       
Query: 282 tctcattgtccaagcttgaatttggtgctgcataccacagactccgtggctcaaatgtcc 341
           ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 336 tctcattgtccaagcttgagtttggtgctgcataccatagactccgtggctcaaatgtcc 395

                                                                  
Query: 342 ttttgccgtttggttttcattgtactgggatgcccatcaaggcctcagctgataa 396
           ||||||| |||| ||| |||||||| || |||||||||||||||||||| |||||
Sbjct: 396 ttttgccttttgctttccattgtacgggaatgcccatcaaggcctcagcagataa 450
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>dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D12, full
           insert sequence
          Length = 3772

 Score =  299 bits (151), Expect = 4e-78
 Identities = 306/355 (86%), Gaps = 2/355 (0%)
 Strand = Plus / Plus

                                                                       
Query: 43  gctgcggctccc-tgcctcgcgcgccgtcgtcaggaaaatgtcgtcaagtactgatggag 101
           |||||||||||| ||||| |||||||  |||||||||||||||||||| | |||||||||
Sbjct: 97  gctgcggctcccctgcct-gcgcgccaccgtcaggaaaatgtcgtcaaatcctgatggag 155

                                                                       
Query: 102 ccaagagtcatgcacgtagagaccttttgctcaagatccaatcagaagctcaaacatgtt 161
            ||  |||  ||| || ||||| |  || ||||| ||||||||||| | ||| |  |  |
Sbjct: 156 gcagaagttttgctcggagagatcaattactcaatatccaatcagatgttcacaagttat 215

                                                                       
Query: 162 gggaggagagcaaggtttttgaggctgaacctggcaatggacttcctggccctggtgaaa 221
           |||||||| ||||||||||||||||||||||||| | |   |  || |||||||| ||||
Sbjct: 216 gggaggagggcaaggtttttgaggctgaacctgggagtaagccaccaggccctggggaaa 275

                                                                       
Query: 222 aattctttggcaattttccgtacccttacatgaatggacttctacatttggggcatgcct 281
           ||||||||||||||||||| |||||||||||||| ||  | ||||||||||| |||||||
Sbjct: 276 aattctttggcaattttccatacccttacatgaacggcttgctacatttgggccatgcct 335

                                                                       
Query: 282 tctcattgtccaagcttgaatttggtgctgcataccacagactccgtggctcaaatgtcc 341
           ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 336 tctcattgtccaagcttgagtttggtgctgcataccatagactccgtggctcaaatgtcc 395

                                                                  
Query: 342 ttttgccgtttggttttcattgtactgggatgcccatcaaggcctcagctgataa 396
           ||||||| |||| ||| |||||||| || |||||||||||||||||||| |||||
Sbjct: 396 ttttgccttttgctttccattgtacgggaatgcccatcaaggcctcagcagataa 450
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  287 bits (145), Expect = 1e-74
 Identities = 280/325 (86%)
 Strand = Plus / Minus

                                                                            
Query: 72       tcaggaaaatgtcgtcaagtactgatggagccaagagtcatgcacgtagagaccttttgc 131
                |||||||||||||||||| | ||||||||| ||  |||  ||| || ||||| |  || |
Sbjct: 12680674 tcaggaaaatgtcgtcaaatcctgatggaggcagaagttttgctcggagagatcaattac 12680615

                                                                            
Query: 132      tcaagatccaatcagaagctcaaacatgttgggaggagagcaaggtttttgaggctgaac 191
                |||| ||||||||||| | ||| |  |  ||||||||| |||||||||||||||||||||
Sbjct: 12680614 tcaatatccaatcagatgttcacaagttatgggaggagggcaaggtttttgaggctgaac 12680555

                                                                            
Query: 192      ctggcaatggacttcctggccctggtgaaaaattctttggcaattttccgtacccttaca 251
                |||| | |   |  || |||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 12680554 ctgggagtaagccaccaggccctggggaaaaattctttggcaattttccatacccttaca 12680495

                                                                            
Query: 252      tgaatggacttctacatttggggcatgccttctcattgtccaagcttgaatttggtgctg 311
                |||| ||  | ||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 12680494 tgaacggcttgctacatttgggccatgccttctcattgtccaagcttgagtttggtgctg 12680435

                                                                            
Query: 312      cataccacagactccgtggctcaaatgtccttttgccgtttggttttcattgtactggga 371
                ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||| || |
Sbjct: 12680434 cataccatagactccgtggctcaaatgtccttttgccttttgctttccattgtacgggaa 12680375

                                         
Query: 372      tgcccatcaaggcctcagctgataa 396
                ||||||||||||||||||| |||||
Sbjct: 12680374 tgcccatcaaggcctcagcagataa 12680350



 Score =  254 bits (128), Expect = 2e-64
 Identities = 284/336 (84%)
 Strand = Plus / Plus

                                                                            
Query: 74       aggaaaatgtcgtcaagtactgatggagccaagagtcatgcacgtagagaccttttgctc 133
                ||||||||||| |||| | ||||||||| ||  |||  ||| || |||||  |||| |||
Sbjct: 19181329 aggaaaatgtcatcaaatcctgatggaggcagaagttttgctcggagagatattttactc 19181388

                                                                            
Query: 134      aagatccaatcagaagctcaaacatgttgggaggagagcaaggtttttgaggctgaacct 193
                |||||||| ||||| ||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 19181389 aagatccagtcagatgctcaaaaatggtgggaggagagcaaggtttttgaggctgaacct 19181448

                                                                            
Query: 194      ggcaatggacttcctggccctggtgaaaaattctttggcaattttccgtacccttacatg 253
                || |||  || ||| |||||||| ||||| ||||||||||| ||||| || |||||||||
Sbjct: 19181449 gggaataaacctccgggccctggggaaaagttctttggcaactttccatatccttacatg 19181508

                                                                            
Query: 254      aatggacttctacatttggggcatgccttctcattgtccaagcttgaatttggtgctgca 313
                |||||  | ||||||||||| ||||| ||||| ||||| || ||||| ||||||||||||
Sbjct: 19181509 aatggcttgctacatttgggccatgcgttctccttgtctaaacttgagtttggtgctgca 19181568

                                                                            
Query: 314      taccacagactccgtggctcaaatgtccttttgccgtttggttttcattgtactgggatg 373
                || || || || ||||| |||||||| |||||||| |||| ||| || ||||| || |||
Sbjct: 19181569 tatcagaggcttcgtggttcaaatgttcttttgccatttgctttccactgtacgggaatg 19181628

                                                    
Query: 374      cccatcaaggcctcagctgataagcttgctagggag 409
                ||||||||||||||||| ||||| ||  ||||||||
Sbjct: 19181629 cccatcaaggcctcagcagataaactctctagggag 19181664
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>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0041C07
          Length = 179047

 Score =  287 bits (145), Expect = 1e-74
 Identities = 280/325 (86%)
 Strand = Plus / Minus

                                                                          
Query: 72     tcaggaaaatgtcgtcaagtactgatggagccaagagtcatgcacgtagagaccttttgc 131
              |||||||||||||||||| | ||||||||| ||  |||  ||| || ||||| |  || |
Sbjct: 146612 tcaggaaaatgtcgtcaaatcctgatggaggcagaagttttgctcggagagatcaattac 146553

                                                                          
Query: 132    tcaagatccaatcagaagctcaaacatgttgggaggagagcaaggtttttgaggctgaac 191
              |||| ||||||||||| | ||| |  |  ||||||||| |||||||||||||||||||||
Sbjct: 146552 tcaatatccaatcagatgttcacaagttatgggaggagggcaaggtttttgaggctgaac 146493

                                                                          
Query: 192    ctggcaatggacttcctggccctggtgaaaaattctttggcaattttccgtacccttaca 251
              |||| | |   |  || |||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 146492 ctgggagtaagccaccaggccctggggaaaaattctttggcaattttccatacccttaca 146433

                                                                          
Query: 252    tgaatggacttctacatttggggcatgccttctcattgtccaagcttgaatttggtgctg 311
              |||| ||  | ||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 146432 tgaacggcttgctacatttgggccatgccttctcattgtccaagcttgagtttggtgctg 146373

                                                                          
Query: 312    cataccacagactccgtggctcaaatgtccttttgccgtttggttttcattgtactggga 371
              ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||| || |
Sbjct: 146372 cataccatagactccgtggctcaaatgtccttttgccttttgctttccattgtacgggaa 146313

                                       
Query: 372    tgcccatcaaggcctcagctgataa 396
              ||||||||||||||||||| |||||
Sbjct: 146312 tgcccatcaaggcctcagcagataa 146288
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>dbj|AK099796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097H06, full
           insert sequence
          Length = 3673

 Score =  274 bits (138), Expect = 2e-70
 Identities = 294/346 (84%)
 Strand = Plus / Plus

                                                                       
Query: 64  cgccgtcgtcaggaaaatgtcgtcaagtactgatggagccaagagtcatgcacgtagaga 123
           ||||||||||||||||||||| |||| | ||||||||| ||  |||  ||| || |||||
Sbjct: 124 cgccgtcgtcaggaaaatgtcatcaaatcctgatggaggcagaagttttgctcggagaga 183

                                                                       
Query: 124 ccttttgctcaagatccaatcagaagctcaaacatgttgggaggagagcaaggtttttga 183
             |||| ||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 184 tattttactcaagatccagtcagatgctcaaaaatggtgggaggagagcaaggtttttga 243

                                                                       
Query: 184 ggctgaacctggcaatggacttcctggccctggtgaaaaattctttggcaattttccgta 243
           |||||||||||| |||  || ||| |||||||| ||||| ||||||||||| ||||| ||
Sbjct: 244 ggctgaacctgggaataaacctccgggccctggggaaaagttctttggcaactttccata 303

                                                                       
Query: 244 cccttacatgaatggacttctacatttggggcatgccttctcattgtccaagcttgaatt 303
            ||||||||||||||  | ||||||||||| ||||| ||||| ||||| || ||||| ||
Sbjct: 304 tccttacatgaatggcttgctacatttgggccatgcgttctccttgtctaaacttgagtt 363

                                                                       
Query: 304 tggtgctgcataccacagactccgtggctcaaatgtccttttgccgtttggttttcattg 363
           |||||||||||| || || || ||||| |||||||| |||||||| |||| ||| || ||
Sbjct: 364 tggtgctgcatatcagaggcttcgtggttcaaatgttcttttgccatttgctttccactg 423

                                                         
Query: 364 tactgggatgcccatcaaggcctcagctgataagcttgctagggag 409
           ||| || |||||||||||||||||||| ||||| ||  ||||||||
Sbjct: 424 tacgggaatgcccatcaaggcctcagcagataaactctctagggag 469
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>dbj|AK100624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108I24, full
           insert sequence
          Length = 3669

 Score =  274 bits (138), Expect = 2e-70
 Identities = 294/346 (84%)
 Strand = Plus / Plus

                                                                       
Query: 64  cgccgtcgtcaggaaaatgtcgtcaagtactgatggagccaagagtcatgcacgtagaga 123
           ||||||||||||||||||||| |||| | ||||||||| ||  |||  ||| || |||||
Sbjct: 124 cgccgtcgtcaggaaaatgtcatcaaatcctgatggaggcagaagttttgctcggagaga 183

                                                                       
Query: 124 ccttttgctcaagatccaatcagaagctcaaacatgttgggaggagagcaaggtttttga 183
             |||| ||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 184 tattttactcaagatccagtcagatgctcaaaaatggtgggaggagagcaaggtttttga 243

                                                                       
Query: 184 ggctgaacctggcaatggacttcctggccctggtgaaaaattctttggcaattttccgta 243
           |||||||||||| |||  || ||| |||||||| ||||| ||||||||||| ||||| ||
Sbjct: 244 ggctgaacctgggaataaacctccgggccctggggaaaagttctttggcaactttccata 303

                                                                       
Query: 244 cccttacatgaatggacttctacatttggggcatgccttctcattgtccaagcttgaatt 303
            ||||||||||||||  | ||||||||||| ||||| ||||| ||||| || ||||| ||
Sbjct: 304 tccttacatgaatggcttgctacatttgggccatgcgttctccttgtctaaacttgagtt 363

                                                                       
Query: 304 tggtgctgcataccacagactccgtggctcaaatgtccttttgccgtttggttttcattg 363
           |||||||||||| || || || ||||| |||||||| |||||||| |||| ||| || ||
Sbjct: 364 tggtgctgcatatcagaggcttcgtggttcaaatgttcttttgccatttgctttccactg 423

                                                         
Query: 364 tactgggatgcccatcaaggcctcagctgataagcttgctagggag 409
           ||| || |||||||||||||||||||| ||||| ||  ||||||||
Sbjct: 424 tacgggaatgcccatcaaggcctcagcagataaactctctagggag 469
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>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBb0004A05, complete sequence
          Length = 157913

 Score =  254 bits (128), Expect = 2e-64
 Identities = 284/336 (84%)
 Strand = Plus / Plus

                                                                          
Query: 74     aggaaaatgtcgtcaagtactgatggagccaagagtcatgcacgtagagaccttttgctc 133
              ||||||||||| |||| | ||||||||| ||  |||  ||| || |||||  |||| |||
Sbjct: 112260 aggaaaatgtcatcaaatcctgatggaggcagaagttttgctcggagagatattttactc 112319

                                                                          
Query: 134    aagatccaatcagaagctcaaacatgttgggaggagagcaaggtttttgaggctgaacct 193
              |||||||| ||||| ||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 112320 aagatccagtcagatgctcaaaaatggtgggaggagagcaaggtttttgaggctgaacct 112379

                                                                          
Query: 194    ggcaatggacttcctggccctggtgaaaaattctttggcaattttccgtacccttacatg 253
              || |||  || ||| |||||||| ||||| ||||||||||| ||||| || |||||||||
Sbjct: 112380 gggaataaacctccgggccctggggaaaagttctttggcaactttccatatccttacatg 112439

                                                                          
Query: 254    aatggacttctacatttggggcatgccttctcattgtccaagcttgaatttggtgctgca 313
              |||||  | ||||||||||| ||||| ||||| ||||| || ||||| ||||||||||||
Sbjct: 112440 aatggcttgctacatttgggccatgcgttctccttgtctaaacttgagtttggtgctgca 112499

                                                                          
Query: 314    taccacagactccgtggctcaaatgtccttttgccgtttggttttcattgtactgggatg 373
              || || || || ||||| |||||||| |||||||| |||| ||| || ||||| || |||
Sbjct: 112500 tatcagaggcttcgtggttcaaatgttcttttgccatttgctttccactgtacgggaatg 112559

                                                  
Query: 374    cccatcaaggcctcagctgataagcttgctagggag 409
              ||||||||||||||||| ||||| ||  ||||||||
Sbjct: 112560 cccatcaaggcctcagcagataaactctctagggag 112595
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>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04,
             complete sequence
          Length = 95383

 Score =  182 bits (92), Expect = 6e-43
 Identities = 233/280 (83%)
 Strand = Plus / Plus

                                                                         
Query: 122   gaccttttgctcaagatccaatcagaagctcaaacatgttgggaggagagcaaggttttt 181
             ||||||||||| ||||||||||| ||||  |||| ||||||||| |||| ||||||||| 
Sbjct: 70421 gaccttttgcttaagatccaatctgaagtgcaaaaatgttgggaagagaacaaggttttc 70480

                                                                         
Query: 182   gaggctgaacctggcaatggacttcctggccctggtgaaaaattctttggcaattttccg 241
             || ||  |  ||||  ||  || |||  |||||||||||||||||||||| |||||  | 
Sbjct: 70481 gaagcaaaggctggtgatacacctccaagccctggtgaaaaattctttgggaatttcaca 70540

                                                                         
Query: 242   tacccttacatgaatggacttctacatttggggcatgccttctcattgtccaagcttgaa 301
             ||||| |||||||||||  | |||||||| || ||||||||| || | || |||||||| 
Sbjct: 70541 tacccatacatgaatggcatgctacatttaggccatgccttcacactatcgaagcttgag 70600

                                                                         
Query: 302   tttggtgctgcataccacagactccgtggctcaaatgtccttttgccgtttggttttcat 361
             |||| ||| |||||||||||||||| |||||||||||||||||| || |||| ||| || 
Sbjct: 70601 tttgctgcagcataccacagactccatggctcaaatgtccttttaccctttgctttccac 70660

                                                     
Query: 362   tgtactgggatgcccatcaaggcctcagctgataagcttg 401
             |||||||| ||||| |||||| | ||||||||||||||||
Sbjct: 70661 tgtactggaatgccaatcaagccatcagctgataagcttg 70700
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  182 bits (92), Expect = 6e-43
 Identities = 233/280 (83%)
 Strand = Plus / Plus

                                                                           
Query: 122     gaccttttgctcaagatccaatcagaagctcaaacatgttgggaggagagcaaggttttt 181
               ||||||||||| ||||||||||| ||||  |||| ||||||||| |||| ||||||||| 
Sbjct: 8492151 gaccttttgcttaagatccaatctgaagtgcaaaaatgttgggaagagaacaaggttttc 8492210

                                                                           
Query: 182     gaggctgaacctggcaatggacttcctggccctggtgaaaaattctttggcaattttccg 241
               || ||  |  ||||  ||  || |||  |||||||||||||||||||||| |||||  | 
Sbjct: 8492211 gaagcaaaggctggtgatacacctccaagccctggtgaaaaattctttgggaatttcaca 8492270

                                                                           
Query: 242     tacccttacatgaatggacttctacatttggggcatgccttctcattgtccaagcttgaa 301
               ||||| |||||||||||  | |||||||| || ||||||||| || | || |||||||| 
Sbjct: 8492271 tacccatacatgaatggcatgctacatttaggccatgccttcacactatcgaagcttgag 8492330

                                                                           
Query: 302     tttggtgctgcataccacagactccgtggctcaaatgtccttttgccgtttggttttcat 361
               |||| ||| |||||||||||||||| |||||||||||||||||| || |||| ||| || 
Sbjct: 8492331 tttgctgcagcataccacagactccatggctcaaatgtccttttaccctttgctttccac 8492390

                                                       
Query: 362     tgtactgggatgcccatcaaggcctcagctgataagcttg 401
               |||||||| ||||| |||||| | ||||||||||||||||
Sbjct: 8492391 tgtactggaatgccaatcaagccatcagctgataagcttg 8492430
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>dbj|AK120403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088K21, full
           insert sequence
          Length = 5000

 Score =  182 bits (92), Expect = 6e-43
 Identities = 233/280 (83%)
 Strand = Plus / Plus

                                                                       
Query: 122 gaccttttgctcaagatccaatcagaagctcaaacatgttgggaggagagcaaggttttt 181
           ||||||||||| ||||||||||| ||||  |||| ||||||||| |||| ||||||||| 
Sbjct: 499 gaccttttgcttaagatccaatctgaagtgcaaaaatgttgggaagagaacaaggttttc 558

                                                                       
Query: 182 gaggctgaacctggcaatggacttcctggccctggtgaaaaattctttggcaattttccg 241
           || ||  |  ||||  ||  || |||  |||||||||||||||||||||| |||||  | 
Sbjct: 559 gaagcaaaggctggtgatacacctccaagccctggtgaaaaattctttgggaatttcaca 618

                                                                       
Query: 242 tacccttacatgaatggacttctacatttggggcatgccttctcattgtccaagcttgaa 301
           ||||| |||||||||||  | |||||||| || ||||||||| || | || |||||||| 
Sbjct: 619 tacccatacatgaatggcatgctacatttaggccatgccttcacactatcgaagcttgag 678

                                                                       
Query: 302 tttggtgctgcataccacagactccgtggctcaaatgtccttttgccgtttggttttcat 361
           |||| ||| |||||||||||||||| |||||||||||||||||| || |||| ||| || 
Sbjct: 679 tttgctgcagcataccacagactccatggctcaaatgtccttttaccctttgctttccac 738

                                                   
Query: 362 tgtactgggatgcccatcaaggcctcagctgataagcttg 401
           |||||||| ||||| |||||| | ||||||||||||||||
Sbjct: 739 tgtactggaatgccaatcaagccatcagctgataagcttg 778
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>dbj|AK065584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033A03, full
           insert sequence
          Length = 1769

 Score =  182 bits (92), Expect = 6e-43
 Identities = 233/280 (83%)
 Strand = Plus / Plus

                                                                       
Query: 122 gaccttttgctcaagatccaatcagaagctcaaacatgttgggaggagagcaaggttttt 181
           ||||||||||| ||||||||||| ||||  |||| ||||||||| |||| ||||||||| 
Sbjct: 403 gaccttttgcttaagatccaatctgaagtgcaaaaatgttgggaagagaacaaggttttc 462

                                                                       
Query: 182 gaggctgaacctggcaatggacttcctggccctggtgaaaaattctttggcaattttccg 241
           || ||  |  ||||  ||  || |||  |||||||||||||||||||||| |||||  | 
Sbjct: 463 gaagcaaaggctggtgatacacctccaagccctggtgaaaaattctttgggaatttcaca 522

                                                                       
Query: 242 tacccttacatgaatggacttctacatttggggcatgccttctcattgtccaagcttgaa 301
           ||||| |||||||||||  | |||||||| || ||||||||| || | || |||||||| 
Sbjct: 523 tacccatacatgaatggcatgctacatttaggccatgccttcacactatcgaagcttgag 582

                                                                       
Query: 302 tttggtgctgcataccacagactccgtggctcaaatgtccttttgccgtttggttttcat 361
           |||| ||| |||||||||||||||| |||||||||||||||||| || |||| ||| || 
Sbjct: 583 tttgctgcagcataccacagactccatggctcaaatgtccttttaccctttgctttccac 642

                                                   
Query: 362 tgtactgggatgcccatcaaggcctcagctgataagcttg 401
           |||||||| ||||| |||||| | ||||||||||||||||
Sbjct: 643 tgtactggaatgccaatcaagccatcagctgataagcttg 682
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>ref|NM_100834.3| Arabidopsis thaliana ATP binding / leucine-tRNA ligase/ tRNA ligase
           AT1G09620 mRNA, complete cds
          Length = 4269

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 104/129 (80%)
 Strand = Plus / Plus

                                                                       
Query: 272 gggcatgccttctcattgtccaagcttgaatttggtgctgcataccacagactccgtggc 331
           ||||||||||| |||||||||||| |||| |||| | |||| ||||| || ||  | || 
Sbjct: 328 gggcatgccttttcattgtccaaggttgattttgcttctgcttaccataggctaagagga 387

                                                                       
Query: 332 tcaaatgtccttttgccgtttggttttcattgtactgggatgcccatcaaggcctcagct 391
            | ||||| ||| | || |||||||| ||||||||||| ||||| || ||||| || || 
Sbjct: 388 gctaatgtgcttcttccatttggtttccattgtactggtatgccaattaaggcttctgcg 447

                    
Query: 392 gataagctt 400
           |||||||||
Sbjct: 448 gataagctt 456
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>gb|AY056261.1| Arabidopsis thaliana At1g09620 mRNA sequence
          Length = 3645

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 104/129 (80%)
 Strand = Plus / Plus

                                                                       
Query: 272 gggcatgccttctcattgtccaagcttgaatttggtgctgcataccacagactccgtggc 331
           ||||||||||| |||||||||||| |||| |||| | |||| ||||| || ||  | || 
Sbjct: 314 gggcatgccttttcattgtccaaggttgattttgcttctgcttaccataggctaagagga 373

                                                                       
Query: 332 tcaaatgtccttttgccgtttggttttcattgtactgggatgcccatcaaggcctcagct 391
            | ||||| ||| | || |||||||| ||||||||||| ||||| || ||||| || || 
Sbjct: 374 gctaatgtgcttcttccatttggtttccattgtactggtatgccaattaaggcttctgcg 433

                    
Query: 392 gataagctt 400
           |||||||||
Sbjct: 434 gataagctt 442
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>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 146505

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 104/129 (80%)
 Strand = Plus / Minus

                                                                        
Query: 272  gggcatgccttctcattgtccaagcttgaatttggtgctgcataccacagactccgtggc 331
            ||||||||||| |||||||||||| |||| |||| | |||| ||||| || ||  | || 
Sbjct: 3158 gggcatgccttttcattgtccaaggttgattttgcttctgcttaccataggctaagagga 3099

                                                                        
Query: 332  tcaaatgtccttttgccgtttggttttcattgtactgggatgcccatcaaggcctcagct 391
             | ||||| ||| | || |||||||| ||||||||||| ||||| || ||||| || || 
Sbjct: 3098 gctaatgtgcttcttccatttggtttccattgtactggtatgccaattaaggcttctgcg 3039

                     
Query: 392  gataagctt 400
            |||||||||
Sbjct: 3038 gataagctt 3030
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>ref|XM_606600.2| PREDICTED: Bos taurus similar to nuclear receptor subfamily 2, group
            F, member 6, transcript variant 1 (LOC528188), mRNA
          Length = 2026

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 40   gctgctgcggctccctgcctcgcgcgccgtc 70
            |||||||||||||||||||| ||| ||||||
Sbjct: 1411 gctgctgcggctccctgccttgcgtgccgtc 1441
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>ref|XM_880610.1| PREDICTED: Bos taurus similar to nuclear receptor subfamily 2, group
            F, member 6, transcript variant 5 (LOC528188), mRNA
          Length = 2032

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 40   gctgctgcggctccctgcctcgcgcgccgtc 70
            |||||||||||||||||||| ||| ||||||
Sbjct: 1417 gctgctgcggctccctgccttgcgtgccgtc 1447
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>ref|XM_880589.1| PREDICTED: Bos taurus similar to nuclear receptor subfamily 2, group
            F, member 6, transcript variant 4 (LOC528188), mRNA
          Length = 2032

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 40   gctgctgcggctccctgcctcgcgcgccgtc 70
            |||||||||||||||||||| ||| ||||||
Sbjct: 1417 gctgctgcggctccctgccttgcgtgccgtc 1447
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>ref|XM_880568.1| PREDICTED: Bos taurus similar to nuclear receptor subfamily 2, group
            F, member 6, transcript variant 3 (LOC528188), mRNA
          Length = 2035

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 40   gctgctgcggctccctgcctcgcgcgccgtc 70
            |||||||||||||||||||| ||| ||||||
Sbjct: 1420 gctgctgcggctccctgccttgcgtgccgtc 1450
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>ref|XM_880549.1| PREDICTED: Bos taurus similar to nuclear receptor subfamily 2, group
            F, member 6, transcript variant 2 (LOC528188), mRNA
          Length = 2032

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 40   gctgctgcggctccctgcctcgcgcgccgtc 70
            |||||||||||||||||||| ||| ||||||
Sbjct: 1417 gctgctgcggctccctgccttgcgtgccgtc 1447
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>gb|AC074264.3| Homo sapiens BAC clone RP11-410L9 from 2, complete sequence
          Length = 122472

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 35   ctgaggctgctgcggctccctgcct 59
            ||||||||||| |||||||||||||
Sbjct: 6156 ctgaggctgctacggctccctgcct 6180
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>gb|U77484.1|RNGZAL3 Rattus norvegicus guanine nucleotide-binding protein (Gz-alpha)
          gene, exon 2
          Length = 1211

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 38 aggctgctgcggctccctgcctcgc 62
          |||||||| ||||||||||||||||
Sbjct: 39 aggctgctccggctccctgcctcgc 15
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>ref|NM_013189.1| Rattus norvegicus guanine nucleotide binding protein, alpha z
           subunit (Gnaz), mRNA
          Length = 3350

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 38  aggctgctgcggctccctgcctcgc 62
           |||||||| ||||||||||||||||
Sbjct: 227 aggctgctccggctccctgcctcgc 203
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>gb|AY247648.1| Spirochaeta thermophila strain Z-1203 DNA polymerase I (polA) gene,
           complete cds
          Length = 2703

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 199 tggacttcctggccctggtg 218
           ||||||||||||||||||||
Sbjct: 527 tggacttcctggccctggtg 546
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>gb|AC127951.4| Rattus norvegicus 18 BAC CH230-150D9 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 164101

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 359    cattgtactgggatgcccat 378
              ||||||||||||||||||||
Sbjct: 159649 cattgtactgggatgcccat 159630
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>ref|XM_653129.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0617.2), mRNA
          Length = 978

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  gcctcgcgcgccgtcgtcag 75
           ||||||||||||||||||||
Sbjct: 248 gcctcgcgcgccgtcgtcag 229
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>gb|AC096226.12| Rattus norvegicus 18 BAC CH230-26M18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 232962

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   cattgtactgggatgcccat 378
             ||||||||||||||||||||
Sbjct: 47210 cattgtactgggatgcccat 47191
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>emb|AL121984.14|HSA277C14 Human DNA sequence from clone RP11-277C14 on chromosome 1 Contains part
              of the DNM3 gene for dynamin 3, complete sequence
          Length = 155941

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     atggagccaagagtcatgca 115
              ||||||||||||||||||||
Sbjct: 151125 atggagccaagagtcatgca 151144
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>gb|AC157893.2| Medicago truncatula chromosome 7 BAC clone mth2-7m13, complete sequence
          Length = 140479

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                          
Query: 215    ggtgaaaaattctttggcaattttccgtacccttacatgaatgg 258
              |||||||||||||| |||||||| || |  ||||||| ||||||
Sbjct: 109634 ggtgaaaaattcttcggcaatttcccttttccttacacgaatgg 109677
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>gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complete sequence
          Length = 163490

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    gtttggttttcattgtactg 368
              ||||||||||||||||||||
Sbjct: 117309 gtttggttttcattgtactg 117328
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>gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complete sequence
          Length = 202209

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  gtttggttttcattgtactg 368
            ||||||||||||||||||||
Sbjct: 1400 gtttggttttcattgtactg 1419


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,908,188
Number of Sequences: 3902068
Number of extensions: 3908188
Number of successful extensions: 85572
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85454
Number of HSP's gapped (non-prelim): 114
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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