ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl24b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
2emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 58 3e-05
3emb|AL603664.16| Mouse DNA sequence from clone RP23-247J12 on ch... 44 0.39
4gb|AC024763.2| Caenorhabditis elegans cosmid Y39A3CL, complete s... 42 1.5
5gb|AC125483.4| Mus musculus BAC clone RP23-109I9 from chromosome... 42 1.5
6gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 1.5
7gb|AC020904.7| Homo sapiens chromosome 19 clone CTB-52I2, comple... 42 1.5
8gb|AC124139.9| Mus musculus chromosome 1, clone RP24-78G8, compl... 42 1.5
9dbj|AK068842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
10emb|CR383671.20| Zebrafish DNA sequence from clone CH211-127B6 i... 42 1.5
11dbj|AB045011.1| Homo sapiens hmGluR2 gene for metabotropic gluta... 42 1.5
12gb|AC004633.1| Homo sapiens chromosome 5, P1 clone 41e13 (LBNL H... 40 6.1
13ref|NR_002220.1| Homo sapiens double homeobox A pseudogene 3 (DU... 40 6.1
14gb|AC175711.3| Pan troglodytes BAC clone CH251-100H6 from chromo... 40 6.1
15emb|AL390758.6| Human DNA sequence from clone RP11-540C21 on chr... 40 6.1
16emb|AL139384.17| Human DNA sequence from clone RP11-88E10 on chr... 40 6.1
17emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H1... 40 6.1
18gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 40 6.1
19emb|BX537103.6| Zebrafish DNA sequence from clone CH211-194E1 in... 40 6.1
20gb|AC116903.3| Homo sapiens chromosome 15, clone RP11-152L20, co... 40 6.1
21gb|AC010433.9| Homo sapiens chromosome 5 clone CTD-2202L20, comp... 40 6.1
22emb|BX571955.15| Zebrafish DNA sequence from clone DKEY-27B3 in ... 40 6.1
23gb|AC124148.15| Pan troglodytes clone rp43-71k6, complete sequence 40 6.1
24gb|AC123983.8| Pan troglodytes clone rp43-42n4, complete sequence 40 6.1
25gb|AC125391.10| Pan troglodytes clone rp43-115b1, complete sequence 40 6.1
26gb|AC123978.5| Papio anubis clone rp41-211d5, complete sequence 40 6.1
27dbj|AK057085.1| Homo sapiens cDNA FLJ32523 fis, clone SMINT2000032 40 6.1
28dbj|AB224083.1| Aspergillus oryzae cDNA, contig sequence: AoEST0925 40 6.1
29dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 40 6.1
30ref|XM_693557.1| PREDICTED: Danio rerio similar to LIM-only prot... 40 6.1
31gb|AC161617.4| Pan troglodytes BAC clone CH251-548L6 from chromo... 40 6.1
32gb|AC130669.17| Mus musculus chromosome 15, clone RP24-84O5, com... 40 6.1
33emb|BX005348.9| Zebrafish DNA sequence from clone DKEY-245J21 in... 40 6.1
34gb|AC159643.2| Mus musculus BAC clone RP23-384H10 from chromosom... 40 6.1
35gb|AC159622.2| Mus musculus BAC clone RP24-289D12 from chromosom... 40 6.1
36gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome 40 6.1
37ref|NG_004843.1| Homo sapiens double homeobox A pseudogene 4 (DU... 40 6.1
38ref|NG_004845.1| Homo sapiens double homeobox A pseudogene 6 (DU... 40 6.1
39emb|BX323548.11| Zebrafish DNA sequence from clone DKEY-31D5 in ... 40 6.1
40emb|BX548012.11| Zebrafish DNA sequence from clone DKEY-271O4 in... 40 6.1
41dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
42gb|AC093674.2| Homo sapiens BAC clone RP11-592G8 from 2, complet... 40 6.1
43gb|AC116162.5| Homo sapiens chromosome 15, clone RP11-268L17, co... 40 6.1
44emb|BX649600.8| Zebrafish DNA sequence from clone CH211-222M18 i... 40 6.1
45gb|AC154138.11| Mus musculus 10 BAC RP23-124J6 (Roswell Park Can... 40 6.1
46gb|AC155642.6| Mus musculus 10 BAC RP24-117F24 (Roswell Park Can... 40 6.1
47dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
48dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
49emb|CT030636.13| Mouse DNA sequence from clone RP23-432O2 on chr... 40 6.1
50gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, c... 40 6.1
51emb|AJ249895.1|MMU249895 Mus musculus mas proto-oncogene and Igf... 40 6.1 
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 54/60 (90%), Gaps = 3/60 (5%)
 Strand = Plus / Plus

                                                                            
Query: 43       agacgaacaagcacaccacacaaaccca-cacact--ccccacggaattcacaagcccac 99
                ||||||||||||||| ||||||||||||  |||||  |||||||||||||||||| ||||
Sbjct: 22315395 agacgaacaagcacagcacacaaacccaggacacttcccccacggaattcacaagaccac 22315454



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 216      cgccgccgccttccgcagatttccc 240
                |||||||||| ||||||||||||||
Sbjct: 22315656 cgccgccgccctccgcagatttccc 22315680
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
             complete sequence
          Length = 147214

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 54/60 (90%), Gaps = 3/60 (5%)
 Strand = Plus / Plus

                                                                         
Query: 43    agacgaacaagcacaccacacaaaccca-cacact--ccccacggaattcacaagcccac 99
             ||||||||||||||| ||||||||||||  |||||  |||||||||||||||||| ||||
Sbjct: 66299 agacgaacaagcacagcacacaaacccaggacacttcccccacggaattcacaagaccac 66358



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 216   cgccgccgccttccgcagatttccc 240
             |||||||||| ||||||||||||||
Sbjct: 66560 cgccgccgccctccgcagatttccc 66584
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>emb|AL603664.16| Mouse DNA sequence from clone RP23-247J12 on chromosome 11, complete
             sequence
          Length = 158098

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 54    cacaccacacaaacccacacac 75
             ||||||||||||||||||||||
Sbjct: 55648 cacaccacacaaacccacacac 55669
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>gb|AC024763.2| Caenorhabditis elegans cosmid Y39A3CL, complete sequence
          Length = 74520

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 420  ttttatttatttttcgagcat 440
            |||||||||||||||||||||
Sbjct: 5444 ttttatttatttttcgagcat 5464
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>gb|AC125483.4| Mus musculus BAC clone RP23-109I9 from chromosome 1, complete sequence
          Length = 201732

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 49     acaagcacaccacacaaacccacacactc 77
              |||| |||||||||||||| |||||||||
Sbjct: 194821 acaaacacaccacacaaacgcacacactc 194849
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 108    cgagaaatagaaatcctctcg 128
              |||||||||||||||||||||
Sbjct: 666980 cgagaaatagaaatcctctcg 667000
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>gb|AC020904.7| Homo sapiens chromosome 19 clone CTB-52I2, complete sequence
          Length = 148824

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 413   cagtcctttttatttattttt 433
             |||||||||||||||||||||
Sbjct: 84011 cagtcctttttatttattttt 84031
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>gb|AC124139.9| Mus musculus chromosome 1, clone RP24-78G8, complete sequence
          Length = 216124

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 49     acaagcacaccacacaaacccacacactc 77
              |||| |||||||||||||| |||||||||
Sbjct: 185992 acaaacacaccacacaaacgcacacactc 185964
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>dbj|AK068842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162C23, full
           insert sequence
          Length = 3754

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 216 cgccgccgccttccgcagatttccc 240
           |||||||||| ||||||||||||||
Sbjct: 213 cgccgccgccctccgcagatttccc 237
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>emb|CR383671.20| Zebrafish DNA sequence from clone CH211-127B6 in linkage group 15,
              complete sequence
          Length = 132412

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 59     cacacaaacccacacactccc 79
              |||||||||||||||||||||
Sbjct: 111764 cacacaaacccacacactccc 111784
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>dbj|AB045011.1| Homo sapiens hmGluR2 gene for metabotropic glutamate receptor type 2,
            complete cds
          Length = 16436

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 58   ccacacaaacccacacactccccac 82
            ||||||| |||||||||||||||||
Sbjct: 6177 ccacacacacccacacactccccac 6201
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>gb|AC004633.1| Homo sapiens chromosome 5, P1 clone 41e13 (LBNL H151), complete
             sequence
          Length = 89484

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 417   cctttttatttatttttcgagcat 440
             |||||||||||||||||| |||||
Sbjct: 67912 cctttttatttatttttctagcat 67889
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>ref|NR_002220.1| Homo sapiens double homeobox A pseudogene 3 (DUXAP3) on chromosome 10
          Length = 3458

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 413  cagtcctttttatttatttt 432
            ||||||||||||||||||||
Sbjct: 1463 cagtcctttttatttatttt 1444
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>gb|AC175711.3| Pan troglodytes BAC clone CH251-100H6 from chromosome unknown, complete
             sequence
          Length = 169508

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ttccaaatcccctcccaaga 159
             ||||||||||||||||||||
Sbjct: 13618 ttccaaatcccctcccaaga 13599
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>emb|AL390758.6| Human DNA sequence from clone RP11-540C21 on chromosome 10, complete
             sequence
          Length = 15250

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   cagtcctttttatttatttt 432
             ||||||||||||||||||||
Sbjct: 11419 cagtcctttttatttatttt 11400
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>emb|AL139384.17| Human DNA sequence from clone RP11-88E10 on chromosome 13q33.1-34
            Contains the 5' end of the ATP11A gene for Class VI
            ATPase type IIA, a novel gene, the 5' end of the TUBGCP3
            gene for tubulin gamma complex associated protein 3 and
            two CpG islands, complete sequence
          Length = 187157

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 140  ttccaaatcccctcccaaga 159
            ||||||||||||||||||||
Sbjct: 4499 ttccaaatcccctcccaaga 4518
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>emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H10 on chromosome 10 Contains a
             vomeronasal receptor (V1R) pseudogene, a cubilin
             (intrinsic factor-cobalamin receptor) (CUBN) pseudogene,
             gene KIAA0187, two novel genes, the gene for a novel
             protein similar to Ras suppressor protein 1 (RSU1) and
             four CpG islands, complete sequence
          Length = 197864

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   cagtcctttttatttatttt 432
             ||||||||||||||||||||
Sbjct: 97726 cagtcctttttatttatttt 97745
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>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    agaaatagaaatcctctcgaaaaa 133
              |||||||||||||||||| |||||
Sbjct: 908666 agaaatagaaatcctctcaaaaaa 908643
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>emb|BX537103.6| Zebrafish DNA sequence from clone CH211-194E1 in linkage group 8,
              complete sequence
          Length = 187569

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     gacgaacaagcacaccacac 63
              ||||||||||||||||||||
Sbjct: 186670 gacgaacaagcacaccacac 186689
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>gb|AC116903.3| Homo sapiens chromosome 15, clone RP11-152L20, complete sequence
          Length = 159893

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 413  cagtcctttttatttatttt 432
            ||||||||||||||||||||
Sbjct: 8485 cagtcctttttatttatttt 8504
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>gb|AC010433.9| Homo sapiens chromosome 5 clone CTD-2202L20, complete sequence
          Length = 258929

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 417   cctttttatttatttttcgagcat 440
             |||||||||||||||||| |||||
Sbjct: 36387 cctttttatttatttttctagcat 36364
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>emb|BX571955.15| Zebrafish DNA sequence from clone DKEY-27B3 in linkage group 10,
             complete sequence
          Length = 272498

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 54    cacaccacacaaacccacacactcccca 81
             ||||||||||| ||||| ||||||||||
Sbjct: 90796 cacaccacacacacccagacactcccca 90769
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>gb|AC124148.15| Pan troglodytes clone rp43-71k6, complete sequence
          Length = 194187

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    cagtcctttttatttatttt 432
              ||||||||||||||||||||
Sbjct: 106376 cagtcctttttatttatttt 106357
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>gb|AC123983.8| Pan troglodytes clone rp43-42n4, complete sequence
          Length = 187806

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   cagtcctttttatttatttt 432
             ||||||||||||||||||||
Sbjct: 84728 cagtcctttttatttatttt 84747
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>gb|AC125391.10| Pan troglodytes clone rp43-115b1, complete sequence
          Length = 155629

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   cagtcctttttatttatttt 432
             ||||||||||||||||||||
Sbjct: 66269 cagtcctttttatttatttt 66250
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>gb|AC123978.5| Papio anubis clone rp41-211d5, complete sequence
          Length = 180097

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    cagtcctttttatttatttt 432
              ||||||||||||||||||||
Sbjct: 120196 cagtcctttttatttatttt 120177
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>dbj|AK057085.1| Homo sapiens cDNA FLJ32523 fis, clone SMINT2000032
          Length = 2047

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 140  ttccaaatcccctcccaaga 159
            ||||||||||||||||||||
Sbjct: 1314 ttccaaatcccctcccaaga 1333
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>dbj|AB224083.1| Aspergillus oryzae cDNA, contig sequence: AoEST0925
          Length = 514

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 55 acaccacacaaacccacaca 74
          ||||||||||||||||||||
Sbjct: 8  acaccacacaaacccacaca 27
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>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102
          Length = 1779707

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      acaccacacaaacccacaca 74
               ||||||||||||||||||||
Sbjct: 1514174 acaccacacaaacccacaca 1514155
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>ref|XM_693557.1| PREDICTED: Danio rerio similar to LIM-only protein 6 (Triple LIM
            domain protein 6) (LOC570116), mRNA
          Length = 2373

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   gacgaacaagcacaccacac 63
            ||||||||||||||||||||
Sbjct: 1838 gacgaacaagcacaccacac 1857
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>gb|AC161617.4| Pan troglodytes BAC clone CH251-548L6 from chromosome unknown, complete
              sequence
          Length = 218767

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    ttccaaatcccctcccaaga 159
              ||||||||||||||||||||
Sbjct: 183091 ttccaaatcccctcccaaga 183110
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>gb|AC130669.17| Mus musculus chromosome 15, clone RP24-84O5, complete sequence
          Length = 205231

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 52     agcacaccacacaaacccacacac 75
              |||||||||||||||| |||||||
Sbjct: 141416 agcacaccacacaaacacacacac 141393
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>emb|BX005348.9| Zebrafish DNA sequence from clone DKEY-245J21 in linkage group 11,
             complete sequence
          Length = 145299

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    agcacaccacacaaacccacacac 75
             ||||||| ||||||||||||||||
Sbjct: 84240 agcacacaacacaaacccacacac 84217
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>gb|AC159643.2| Mus musculus BAC clone RP23-384H10 from chromosome 12, complete
            sequence
          Length = 200939

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 414  agtcctttttatttattttt 433
            ||||||||||||||||||||
Sbjct: 9888 agtcctttttatttattttt 9907
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>gb|AC159622.2| Mus musculus BAC clone RP24-289D12 from chromosome 12, complete
             sequence
          Length = 174662

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   agtcctttttatttattttt 433
             ||||||||||||||||||||
Sbjct: 16628 agtcctttttatttattttt 16609
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>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    cgagaaatccagcgcgccgt 272
              ||||||||||||||||||||
Sbjct: 140753 cgagaaatccagcgcgccgt 140734
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>ref|NG_004843.1| Homo sapiens double homeobox A pseudogene 4 (DUXAP4) on chromosome 10
          Length = 1813

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 413  cagtcctttttatttatttt 432
            ||||||||||||||||||||
Sbjct: 1030 cagtcctttttatttatttt 1011
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>ref|NG_004845.1| Homo sapiens double homeobox A pseudogene 6 (DUXAP6) on chromosome 15
          Length = 1260

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 413  cagtcctttttatttatttt 432
            ||||||||||||||||||||
Sbjct: 1031 cagtcctttttatttatttt 1012
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>emb|BX323548.11| Zebrafish DNA sequence from clone DKEY-31D5 in linkage group 11,
             complete sequence
          Length = 229237

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    agcacaccacacaaacccacacac 75
             ||||||| ||||||||||||||||
Sbjct: 91157 agcacacaacacaaacccacacac 91134
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>emb|BX548012.11| Zebrafish DNA sequence from clone DKEY-271O4 in linkage group 18,
             complete sequence
          Length = 154557

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 54    cacaccacacaaacccacacactcccca 81
             ||||||||||| ||||| ||||||||||
Sbjct: 87692 cacaccacacacacccagacactcccca 87665
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 408      ctgagcagtcctttttattt 427
                ||||||||||||||||||||
Sbjct: 21863207 ctgagcagtcctttttattt 21863226
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>gb|AC093674.2| Homo sapiens BAC clone RP11-592G8 from 2, complete sequence
          Length = 93188

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    ttcacaagcccacaaaaatt 106
             ||||||||||||||||||||
Sbjct: 15492 ttcacaagcccacaaaaatt 15511
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>gb|AC116162.5| Homo sapiens chromosome 15, clone RP11-268L17, complete sequence
          Length = 160580

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 413    cagtcctttttatttatttt 432
              ||||||||||||||||||||
Sbjct: 113118 cagtcctttttatttatttt 113137
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>emb|BX649600.8| Zebrafish DNA sequence from clone CH211-222M18 in linkage group 18,
              complete sequence
          Length = 228633

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     caccacacaaacccacacac 75
              ||||||||||||||||||||
Sbjct: 141179 caccacacaaacccacacac 141198
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>gb|AC154138.11| Mus musculus 10 BAC RP23-124J6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 179306

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 49    acaagcacaccacacaaacccaca 72
             |||| |||||||||||||||||||
Sbjct: 49279 acaaccacaccacacaaacccaca 49302
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>gb|AC155642.6| Mus musculus 10 BAC RP24-117F24 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 195095

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 49     acaagcacaccacacaaacccaca 72
              |||| |||||||||||||||||||
Sbjct: 112696 acaaccacaccacacaaacccaca 112719
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>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0429B05
          Length = 155024

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    ctgagcagtcctttttattt 427
              ||||||||||||||||||||
Sbjct: 142790 ctgagcagtcctttttattt 142809
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>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0409A07
          Length = 146663

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   ctgagcagtcctttttattt 427
             ||||||||||||||||||||
Sbjct: 63876 ctgagcagtcctttttattt 63895
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>emb|CT030636.13| Mouse DNA sequence from clone RP23-432O2 on chromosome 17, complete
              sequence
          Length = 204320

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    tccaaatcccctcccaagag 160
              ||||||||||||||||||||
Sbjct: 140873 tccaaatcccctcccaagag 140892
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>gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, complete sequence
          Length = 186153

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    tccaaatcccctcccaagag 160
              ||||||||||||||||||||
Sbjct: 166692 tccaaatcccctcccaagag 166711
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>emb|AJ249895.1|MMU249895 Mus musculus mas proto-oncogene and Igf2r gene for insulin-like growth
              factor type 2 and L41ps and Au76 pseudogenes
          Length = 138490

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    tccaaatcccctcccaagag 160
              ||||||||||||||||||||
Sbjct: 106582 tccaaatcccctcccaagag 106563


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,539,730
Number of Sequences: 3902068
Number of extensions: 5539730
Number of successful extensions: 191986
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 191690
Number of HSP's gapped (non-prelim): 294
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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