>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)|
            (Trio-associated repeat on actin)
          Length = 2014

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -3

Query: 269  TTAMGRARSQLTGGEIRRNQPERPGLVPSPVCPCT 165
            T   GRA++ L  G     Q E P  +PSP C  T
Sbjct: 1296 TQPEGRAKATLANGHRPGQQSESPAQLPSPACTST 1330

>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID|
           domain-containing protein 1B) (Osa homolog 2) (hOsa2)
           (p250R) (BRG1-binding protein hELD/OSA1)
           (BRG1-associated factor 250b) (BAF250B)
          Length = 2236

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
 Frame = +2

Query: 119 SLPPSTSSSGLASYPP-------YKDRQERGQGPGAPVGSVG-SRLPSAGI 247
           S PP+ S    ASY           + Q  GQGP  P G+V   R+PSAG+
Sbjct: 841 SRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGM 891

>EMIL2_HUMAN (Q9BXX0) EMILIN-2 precursor (Elastin microfibril interface-located|
           protein 2) (Elastin microfibril interfacer 2) (Protein
           FOAP-10)
          Length = 1053

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = +1

Query: 166 VQGQTGEGTRPGRSGWFRRISPPVSWDLARPMAVVAS 276
           V GQTG GT PG  G+      P S  +A P A V S
Sbjct: 868 VDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPS 904

>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 125 PPSTSSSGLASYPPYKDRQERGQGPGAPVGSVG 223
           PPST SSG+++ PP     + G  P  P G  G
Sbjct: 160 PPSTPSSGVSTTPP-----QTGGPPPPPAGGAG 187

>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +2

Query: 137  SSSGLASYPPYKDRQERGQGPGAPVGSVGSRLPSAG 244
            S    +S  P  +RQ R  GPG   GS GS     G
Sbjct: 1381 SKRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGG 1416

>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer|
            protein 3) (Cancer-amplified transcriptional coactivator
            ASC-2) (Activating signal cointegrator 2) (ASC-2)
            (Peroxisome proliferator-activated receptor-interacting
            protein) (P
          Length = 2063

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 101  PWWRLASLPPSTSSSGLASYPPYKDRQERGQGPGAPVGS 217
            P  +  S+P   S  G AS PP  D+Q        P+GS
Sbjct: 1069 PMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGS 1107

>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +2

Query: 137  SSSGLASYPPYKDRQERGQGPGAPVGSVGSRLPSAG 244
            S    +S  P  +RQ R  GPG   GS GS     G
Sbjct: 1384 SKRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGG 1419

>VG22_ICHV1 (Q00105) Hypothetical gene 22 protein|
          Length = 1403

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -2

Query: 246  IPADGRRDPTEPTGAPGPCPLSCLSLYGG*LA--RPELEVEGGREASRH 106
            +PA G     EP   P   P++ L   G  +A  +P   V G R A+RH
Sbjct: 1224 VPAGGIGADPEPARVPSRRPVTLLERRGAHVAEPKPTPRVRGKRPAARH 1272


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,152,911
Number of Sequences: 219361
Number of extensions: 482170
Number of successful extensions: 2366
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2362
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)