ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl24a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187173.1| Oryza sativa (japonica cultivar-group), mRNA 74 3e-10
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 74 3e-10
3dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic D... 74 3e-10
4ref|XM_482928.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.28
5emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 44 0.28
6gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, comple... 44 0.28
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
8gb|AC137550.1| Homo sapiens chromosome 5 clone RP11-464K22, comp... 44 0.28
9dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
10dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
11ref|XM_465607.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.1
12ref|NM_197112.1| Oryza sativa (japonica cultivar-group) unknown ... 42 1.1
13gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
14gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
15gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
16gb|AC146481.2| Oryza sativa chromosome 10 B1288B10 genomic sequ... 42 1.1
17gb|AC092211.7| Oryza sativa chromosome 10 P0031G09 genomic sequ... 42 1.1
18gb|AC008481.9| Homo sapiens chromosome 19 clone CTC-398G3, compl... 42 1.1
19dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
20dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
21dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
23dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 1.1
24dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
25gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
26gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
27ref|XM_472176.1| Oryza sativa (japonica cultivar-group), predic... 40 4.3
28gb|AC137748.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
29gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosom... 40 4.3
30gb|BC026213.1| Homo sapiens F-box and WD-40 domain protein 11, t... 40 4.3
31gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 4.3
32ref|NM_012300.2| Homo sapiens F-box and WD-40 domain protein 11 ... 40 4.3
33ref|NM_033645.2| Homo sapiens F-box and WD-40 domain protein 11 ... 40 4.3
34ref|NM_033644.2| Homo sapiens F-box and WD-40 domain protein 11 ... 40 4.3
35gb|AY330485.1| Saccharopolyspora erythraea amino acid permease g... 40 4.3
36emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.3
37gb|AC011387.5| Homo sapiens chromosome 5 clone CTB-168B7, comple... 40 4.3
38gb|AY044272.1| Pseudomonas sp. B13 3-oxoadipate:succinyl-CoA tra... 40 4.3
39gb|CP000249.1| Frankia sp. CcI3, complete genome 40 4.3
40gb|AC011410.6|AC011410 Homo sapiens chromosome 5 clone CTB-78H18... 40 4.3
41gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 4.3
42dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
43gb|AE005120.1| Halobacterium sp. NRC-1 section 151 of 170 of the... 40 4.3
44gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 4.3
45gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 4.3
46emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4,... 40 4.3
47dbj|AB014596.1| Homo sapiens mRNA for KIAA0696 protein, partial cds 40 4.3 
>ref|NM_187173.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2688

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 139/173 (80%)
 Strand = Plus / Plus

                                                                       
Query: 76  ccccaccttcctccgtgcgaccgagctccgcctcctccgctgcaccctcccttccccgat 135
           ||||||||||||||| | |  |||||||||||||||||||||||| ||||| ||||||  
Sbjct: 27  ccccaccttcctccgcgaggtcgagctccgcctcctccgctgcacgctcccctccccggc 86

                                                                       
Query: 136 ctcccaaccagctcccccctcacctcccccagaacacccgctcggtcctgtcgtgtcctc 195
           | |||  ||  | || ||||| ||||||||    ||||||||||  || ||||   ||||
Sbjct: 87  caccctgcctcccccgccctcgcctccccctcgccacccgctcgccccggtcgccgcctc 146

                                                                
Query: 196 tgccgtcgccgccgtcgaggtcggggactacgtggctgctatcgcctccgccg 248
            ||||||||||||||||| | ||| ||||||| ||| ||  ||||||||||||
Sbjct: 147 cgccgtcgccgccgtcgacgccggcgactacgcggccgccctcgcctccgccg 199
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 139/173 (80%)
 Strand = Plus / Minus

                                                                            
Query: 76       ccccaccttcctccgtgcgaccgagctccgcctcctccgctgcaccctcccttccccgat 135
                ||||||||||||||| | |  |||||||||||||||||||||||| ||||| ||||||  
Sbjct: 15733752 ccccaccttcctccgcgaggtcgagctccgcctcctccgctgcacgctcccctccccggc 15733693

                                                                            
Query: 136      ctcccaaccagctcccccctcacctcccccagaacacccgctcggtcctgtcgtgtcctc 195
                | |||  ||  | || ||||| ||||||||    ||||||||||  || ||||   ||||
Sbjct: 15733692 caccctgcctcccccgccctcgcctccccctcgccacccgctcgccccggtcgccgcctc 15733633

                                                                     
Query: 196      tgccgtcgccgccgtcgaggtcggggactacgtggctgctatcgcctccgccg 248
                 ||||||||||||||||| | ||| ||||||| ||| ||  ||||||||||||
Sbjct: 15733632 cgccgtcgccgccgtcgacgccggcgactacgcggccgccctcgcctccgccg 15733580
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>dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0075N02
          Length = 186945

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 139/173 (80%)
 Strand = Plus / Minus

                                                                          
Query: 76     ccccaccttcctccgtgcgaccgagctccgcctcctccgctgcaccctcccttccccgat 135
              ||||||||||||||| | |  |||||||||||||||||||||||| ||||| ||||||  
Sbjct: 131609 ccccaccttcctccgcgaggtcgagctccgcctcctccgctgcacgctcccctccccggc 131550

                                                                          
Query: 136    ctcccaaccagctcccccctcacctcccccagaacacccgctcggtcctgtcgtgtcctc 195
              | |||  ||  | || ||||| ||||||||    ||||||||||  || ||||   ||||
Sbjct: 131549 caccctgcctcccccgccctcgcctccccctcgccacccgctcgccccggtcgccgcctc 131490

                                                                   
Query: 196    tgccgtcgccgccgtcgaggtcggggactacgtggctgctatcgcctccgccg 248
               ||||||||||||||||| | ||| ||||||| ||| ||  ||||||||||||
Sbjct: 131489 cgccgtcgccgccgtcgacgccggcgactacgcggccgccctcgcctccgccg 131437
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>ref|XM_482928.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 963

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 201 tcgccgccgtcgaggtcgggga 222
           ||||||||||||||||||||||
Sbjct: 206 tcgccgccgtcgaggtcgggga 185
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>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 197    gccgtcgccgccgtcgaggtcg 218
              ||||||||||||||||||||||
Sbjct: 262709 gccgtcgccgccgtcgaggtcg 262730
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>gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, complete sequence
          Length = 145242

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 109    cctccgctgcaccctcccttcc 130
              ||||||||||||||||||||||
Sbjct: 140679 cctccgctgcaccctcccttcc 140700
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 201      tcgccgccgtcgaggtcgggga 222
                ||||||||||||||||||||||
Sbjct: 23410137 tcgccgccgtcgaggtcgggga 23410116
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>gb|AC137550.1| Homo sapiens chromosome 5 clone RP11-464K22, complete sequence
          Length = 43879

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 109   cctccgctgcaccctcccttcc 130
             ||||||||||||||||||||||
Sbjct: 26013 cctccgctgcaccctcccttcc 26034
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>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0451G12
          Length = 142182

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 201   tcgccgccgtcgaggtcgggga 222
             ||||||||||||||||||||||
Sbjct: 91974 tcgccgccgtcgaggtcgggga 91953
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>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1111_E05
          Length = 126978

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 201  tcgccgccgtcgaggtcgggga 222
            ||||||||||||||||||||||
Sbjct: 1552 tcgccgccgtcgaggtcgggga 1531
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>ref|XM_465607.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 387

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 121 cctcccttccccgatctccca 141
           |||||||||||||||||||||
Sbjct: 51  cctcccttccccgatctccca 71
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>ref|NM_197112.1| Oryza sativa (japonica cultivar-group) unknown protein
           (P0031G09.5), mRNA
          Length = 707

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 121 cctcccttccccgatctccca 141
           |||||||||||||||||||||
Sbjct: 106 cctcccttccccgatctccca 126
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>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08,
              complete sequence
          Length = 132017

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 197    gccgtcgccgccgtcgaggtc 217
              |||||||||||||||||||||
Sbjct: 128750 gccgtcgccgccgtcgaggtc 128770
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>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0084P24, complete sequence
          Length = 148784

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 197   gccgtcgccgccgtcgaggtc 217
             |||||||||||||||||||||
Sbjct: 78362 gccgtcgccgccgtcgaggtc 78382
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>gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0068E24, complete sequence
          Length = 141492

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    cctctgccgtcgccgccgtcg 212
              |||||||||||||||||||||
Sbjct: 134080 cctctgccgtcgccgccgtcg 134060
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>gb|AC146481.2| Oryza sativa chromosome 10  B1288B10 genomic sequence, complete
             sequence
          Length = 58734

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   cctcccttccccgatctccca 141
             |||||||||||||||||||||
Sbjct: 37578 cctcccttccccgatctccca 37558
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>gb|AC092211.7| Oryza sativa chromosome 10  P0031G09 genomic sequence, complete
            sequence
          Length = 17072

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 121  cctcccttccccgatctccca 141
            |||||||||||||||||||||
Sbjct: 5686 cctcccttccccgatctccca 5666
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>gb|AC008481.9| Homo sapiens chromosome 19 clone CTC-398G3, complete sequence
          Length = 142645

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 92    gcgaccgagctccgcctcctc 112
             |||||||||||||||||||||
Sbjct: 65118 gcgaccgagctccgcctcctc 65138
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 192      cctctgccgtcgccgccgtcg 212
                |||||||||||||||||||||
Sbjct: 22981573 cctctgccgtcgccgccgtcg 22981553
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 121      cctcccttccccgatctccca 141
                |||||||||||||||||||||
Sbjct: 18065445 cctcccttccccgatctccca 18065425



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 104      cgcctcctccgctgcaccct 123
                ||||||||||||||||||||
Sbjct: 19820193 cgcctcctccgctgcaccct 19820212
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 197      gccgtcgccgccgtcgaggtc 217
                |||||||||||||||||||||
Sbjct: 20240090 gccgtcgccgccgtcgaggtc 20240110



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 101      ctccgcctcctccgctgcac 120
                ||||||||||||||||||||
Sbjct: 15020663 ctccgcctcctccgctgcac 15020644
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 121      cctcccttccccgatctccca 141
                |||||||||||||||||||||
Sbjct: 16287312 cctcccttccccgatctccca 16287332
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 274     cttcgccgaggttgcccaggg 294
               |||||||||||||||||||||
Sbjct: 1091823 cttcgccgaggttgcccaggg 1091843
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>dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0487H05
          Length = 176057

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    cctcccttccccgatctccca 141
              |||||||||||||||||||||
Sbjct: 121799 cctcccttccccgatctccca 121819
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 121      cctcccttccccgatctccca 141
                |||||||||||||||||||||
Sbjct: 18074698 cctcccttccccgatctccca 18074678



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 104      cgcctcctccgctgcaccct 123
                ||||||||||||||||||||
Sbjct: 19831469 cgcctcctccgctgcaccct 19831488
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 192      cctctgccgtcgccgccgtcg 212
                |||||||||||||||||||||
Sbjct: 23291483 cctctgccgtcgccgccgtcg 23291463
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>ref|XM_472176.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 195 ctgccgtcgccgccgtcgag 214
           ||||||||||||||||||||
Sbjct: 31  ctgccgtcgccgccgtcgag 50
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>gb|AC137748.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0076A09, complete sequence
          Length = 157010

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   ctccgcctcctccgctgcac 120
             ||||||||||||||||||||
Sbjct: 49413 ctccgcctcctccgctgcac 49394
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>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0096G08 map E1363S, complete sequence
          Length = 140681

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   cgcctcctccgctgcaccct 123
             ||||||||||||||||||||
Sbjct: 81231 cgcctcctccgctgcaccct 81250
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>gb|BC026213.1| Homo sapiens F-box and WD-40 domain protein 11, transcript variant 2,
            mRNA (cDNA clone MGC:21122 IMAGE:4419029), complete cds
          Length = 4395

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 105  gcctcctccgctgcaccctcccttcccc 132
            ||||||||| |||| |||||||||||||
Sbjct: 3976 gcctcctcccctgccccctcccttcccc 3949
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 88      ccgtgcgaccgagctccgcc 107
               ||||||||||||||||||||
Sbjct: 2041340 ccgtgcgaccgagctccgcc 2041359
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>ref|NM_012300.2| Homo sapiens F-box and WD-40 domain protein 11 (FBXW11), transcript
            variant 3, mRNA
          Length = 4575

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 105  gcctcctccgctgcaccctcccttcccc 132
            ||||||||| |||| |||||||||||||
Sbjct: 4014 gcctcctcccctgccccctcccttcccc 3987
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>ref|NM_033645.2| Homo sapiens F-box and WD-40 domain protein 11 (FBXW11), transcript
            variant 1, mRNA
          Length = 4473

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 105  gcctcctccgctgcaccctcccttcccc 132
            ||||||||| |||| |||||||||||||
Sbjct: 3912 gcctcctcccctgccccctcccttcccc 3885
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>ref|NM_033644.2| Homo sapiens F-box and WD-40 domain protein 11 (FBXW11), transcript
            variant 2, mRNA
          Length = 4536

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 105  gcctcctccgctgcaccctcccttcccc 132
            ||||||||| |||| |||||||||||||
Sbjct: 3975 gcctcctcccctgccccctcccttcccc 3948
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>gb|AY330485.1| Saccharopolyspora erythraea amino acid permease gene, partial cds;
            transport protein, helix-turn-helix regulator (pkeRI),
            P450 monooxygenase (pkePI), P450 monooxygenase (pkePII),
            P450 monooxygenase (pkePIII), type I PKS (pkeAI), type I
            PKS (pkeAII), and type I PKS (pkeAIII) genes, complete
            cds; pkeAIV gene, complete sequence; type I PKS,
            monooxygenases, transporter, ketoacyl-ACP synthase
            (typeII), acyl carrier protien, amino transferase, and
            DNA-binding protein genes, complete cds; and unknown
            genes
          Length = 68451

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   ggccacggccatggcggcga 65
            ||||||||||||||||||||
Sbjct: 2218 ggccacggccatggcggcga 2199
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     ccgtgcgaccgagctccgcc 107
              ||||||||||||||||||||
Sbjct: 202879 ccgtgcgaccgagctccgcc 202898
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>gb|AC011387.5| Homo sapiens chromosome 5 clone CTB-168B7, complete sequence
          Length = 164055

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 105   gcctcctccgctgcaccctcccttcccc 132
             ||||||||| |||| |||||||||||||
Sbjct: 39248 gcctcctcccctgccccctcccttcccc 39275
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>gb|AY044272.1| Pseudomonas sp. B13 3-oxoadipate:succinyl-CoA transferase subunit A
            (catI), 3-oxoadipate:succinyl-CoA transferase subunit B
            (catJ), 3-oxoadipyl-CoA thiolase (catF), and 3-oxoadipate
            enol-lactone hydrolase (catD) genes, complete cds; and
            unknown gene
          Length = 5888

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 45   cggccacggccatggcggcgaccaccgc 72
            |||||||||| | |||||||||||||||
Sbjct: 2146 cggccacggcgaaggcggcgaccaccgc 2173
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    cgtcgccgccgtcgaggtcg 218
              ||||||||||||||||||||
Sbjct: 133813 cgtcgccgccgtcgaggtcg 133794
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>gb|AC011410.6|AC011410 Homo sapiens chromosome 5 clone CTB-78H18, complete sequence
          Length = 119649

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 105  gcctcctccgctgcaccctcccttcccc 132
            ||||||||| |||| |||||||||||||
Sbjct: 2890 gcctcctcccctgccccctcccttcccc 2863
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      ccgtgcgaccgagctccgcc 107
               ||||||||||||||||||||
Sbjct: 2122046 ccgtgcgaccgagctccgcc 2122027
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 195      ctgccgtcgccgccgtcgag 214
                ||||||||||||||||||||
Sbjct: 18214189 ctgccgtcgccgccgtcgag 18214170
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>gb|AE005120.1| Halobacterium sp. NRC-1 section 151 of 170 of the complete genome
          Length = 10179

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 199  cgtcgccgccgtcgaggtcg 218
            ||||||||||||||||||||
Sbjct: 7401 cgtcgccgccgtcgaggtcg 7420
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 199     cgtcgccgccgtcgaggtcg 218
               ||||||||||||||||||||
Sbjct: 2658652 cgtcgccgccgtcgaggtcg 2658633
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 38      tcgccaccggccacggccat 57
               ||||||||||||||||||||
Sbjct: 3074022 tcgccaccggccacggccat 3074003
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>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17,
             complete sequence
          Length = 147111

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   ctgccgtcgccgccgtcgag 214
             ||||||||||||||||||||
Sbjct: 49863 ctgccgtcgccgccgtcgag 49844
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>dbj|AB014596.1| Homo sapiens mRNA for KIAA0696 protein, partial cds
          Length = 4230

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 105  gcctcctccgctgcaccctcccttcccc 132
            ||||||||| |||| |||||||||||||
Sbjct: 3669 gcctcctcccctgccccctcccttcccc 3642


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,792,875
Number of Sequences: 3902068
Number of extensions: 2792875
Number of successful extensions: 154111
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 152813
Number of HSP's gapped (non-prelim): 1298
length of query: 329
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 307
effective length of database: 17,147,199,772
effective search space: 5264190330004
effective search space used: 5264190330004
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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