ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl24a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1U202A_ARATH (Q9XIK4) Hypothetical UPF0202 protein At1g10490 117 5e-27
2U202B_ARATH (Q9M2Q4) Hypothetical UPF0202 protein At3g57940 114 6e-26
3ALP_HUMAN (Q9H0A0) N-acetyltransferase-like protein (EC 2.3.1.-) 101 5e-22
4YIL8_CAEEL (O01757) Hypothetical UPF0202 protein F55A12.8 in chr... 91 7e-19
5YDK9_SCHPO (P87115) Hypothetical UPF0202 protein C20G8.09c in ch... 89 3e-18
6U202_DROME (Q9W3C1) Polycomb protein l(1)G0020 (p110 protein) 87 1e-17
7YNN2_YEAST (P53914) Hypothetical UPF0202 protein YNL132w 80 1e-15
8BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein sh... 35 0.058
9OCTB1_DROME (Q9VCZ3) Octopamine receptor beta-1 (DmOct-beta-1R) ... 31 0.64
10HRS_DROME (Q960X8) Hepatocyte growth factor-regulated tyrosine k... 31 0.84
11DPOG1_MOUSE (P54099) DNA polymerase gamma subunit 1 (EC 2.7.7.7)... 30 1.1
12SYG_AERPE (Q9YBF8) Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine... 30 1.4
13AGO2_DROME (Q9VUQ5) Argonaute 2 protein 30 1.9
14LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 prote... 30 1.9
15DPOG1_RAT (Q9QYV8) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (... 30 1.9
16NAB2_YEAST (P32505) Nuclear polyadenylated RNA-binding protein NAB2 30 1.9
17PACC_TRIRU (Q9C1A4) pH-response transcription factor pacC/RIM101 29 2.4
18DNJC9_HUMAN (Q8WXX5) DnaJ homolog subfamily C member 9 (DnaJ pro... 29 3.2
19ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog 29 3.2
20PAT1_YEAST (P25644) Topoisomerase II-associated protein PAT1 28 4.2
21NHL1_CAEEL (Q03601) RING finger protein nhl-1 28 4.2
22YUBO_CAEEL (Q93591) Hypothetical protein F26A3.7 28 5.5
23ANP1_YEAST (P32629) Mannan polymerase II complex ANP1 subunit (M... 28 5.5
24UVRB_FUSNN (Q8RGR2) UvrABC system protein B (Protein uvrB) (Exci... 28 7.1
25AMBN_MOUSE (O55189) Ameloblastin precursor 28 7.1
26DRG2_PHYBI (Q90ZK5) Dermaseptin DRG2 precursor (Dermaseptin-2) 28 7.1
27DRG1_PHYBI (Q90ZK3) Dermaseptin DRG1 precursor (Dermaseptin-1) 28 7.1
28DMS2_PHYBI (P31107) Adenoregulin precursor (Dermaseptin BII) (De... 28 7.1
29BSN_RAT (O88778) Bassoon protein 28 7.1
30DPOLA_OXYNO (Q94636) DNA polymerase alpha catalytic subunit (EC ... 28 7.1
31RIBAB_CHLPN (Q9Z734) Riboflavin biosynthesis protein ribAB [Incl... 27 9.3
32HOR8_HORVU (P17991) C-hordein (Clone PC HOR1-3) (Fragment) 27 9.3
33KAPC_DICDI (P34099) cAMP-dependent protein kinase catalytic subu... 27 9.3
34GDB2_WHEAT (P08453) Gamma-gliadin precursor 27 9.3

>U202A_ARATH (Q9XIK4) Hypothetical UPF0202 protein At1g10490|
          Length = 1058

 Score =  117 bits (294), Expect = 5e-27
 Identities = 58/90 (64%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
 Frame = +2

Query: 95  IRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHR 274
           IRTLIENGV+ R RSMF+I+GDK+RDQIVNL+++L+KS VKS PSVLWCY+N+L+ISSH 
Sbjct: 9   IRTLIENGVKLRHRSMFVIIGDKARDQIVNLHHILSKSVVKSNPSVLWCYKNRLDISSHN 68

Query: 275 KKRAKQIKKLCSAG-YGPREADPFSSSRDL 361
           KKRAKQ+KK+   G   P + D FS   D+
Sbjct: 69  KKRAKQLKKMKERGQLDPEKLDAFSLFLDV 98



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>U202B_ARATH (Q9M2Q4) Hypothetical UPF0202 protein At3g57940|
          Length = 1024

 Score =  114 bits (285), Expect = 6e-26
 Identities = 55/90 (61%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
 Frame = +2

Query: 95  IRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHR 274
           IRTLIENGV+ R RSMF+I+GDKSRDQIVNL++ML+K+ +K  PSVLWCY++KL+ISSH+
Sbjct: 9   IRTLIENGVKLRHRSMFVIIGDKSRDQIVNLHHMLSKAVIKCNPSVLWCYKDKLDISSHK 68

Query: 275 KKRAKQIKKLCSAG-YGPREADPFSSSRDL 361
           +KR+KQ+K+L   G   P + D FS   D+
Sbjct: 69  QKRSKQLKRLRERGQLDPEKLDAFSRLLDV 98



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>ALP_HUMAN (Q9H0A0) N-acetyltransferase-like protein (EC 2.3.1.-)|
          Length = 1025

 Score =  101 bits (251), Expect = 5e-22
 Identities = 47/84 (55%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
 Frame = +2

Query: 95  IRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHR 274
           IR LIENGV +RQRS+F++VGD+ +DQ+V L++ML+K+ VK+RPSVLWCY+ +L  SSHR
Sbjct: 10  IRILIENGVAERQRSLFVVVGDRGKDQVVILHHMLSKATVKARPSVLWCYKKELGFSSHR 69

Query: 275 KKRAKQI-KKLCSAGYGPREADPF 343
           KKR +Q+ KK+ +     ++ DPF
Sbjct: 70  KKRMRQLQKKIKNGTLNIKQDDPF 93



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>YIL8_CAEEL (O01757) Hypothetical UPF0202 protein F55A12.8 in chromosome I|
          Length = 1043

 Score = 90.9 bits (224), Expect = 7e-19
 Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
 Frame = +2

Query: 95  IRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHR 274
           IRT IENGV    RSMF +VGDK+RDQ+  L ++L+KS V +RP+VLWCY+ +L  S+HR
Sbjct: 9   IRTQIENGVASGHRSMFAVVGDKARDQVPILYHILSKSTVSARPNVLWCYKKELSFSTHR 68

Query: 275 KKRAKQIKKLCSAGYGP-READPF 343
            K+AK++KK  +   G   +ADPF
Sbjct: 69  AKKAKKMKKATTTISGSLPDADPF 92



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>YDK9_SCHPO (P87115) Hypothetical UPF0202 protein C20G8.09c in chromosome I|
          Length = 1033

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 43/85 (50%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
 Frame = +2

Query: 95  IRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCY-RNKLEISSH 271
           I TLI+NG +++QRS F++VGD++RDQ+VNL+++L++S+V +RP+VLW Y ++ L  +SH
Sbjct: 10  IPTLIKNGCQEKQRSFFVVVGDRARDQVVNLHWLLSQSKVAARPNVLWMYKKDLLGFTSH 69

Query: 272 RKKRAKQIKKLCSAGY-GPREADPF 343
           RKKR  +IKK    G   P   DPF
Sbjct: 70  RKKRENKIKKEIKRGIRDPNSEDPF 94



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>U202_DROME (Q9W3C1) Polycomb protein l(1)G0020 (p110 protein)|
          Length = 1008

 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = +2

Query: 95  IRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLE-ISSH 271
           IR +IENGV+   R+MFI++GDK+RDQ+  L  +L KS VK+RP+VLWCY+NK E IS+H
Sbjct: 10  IRVMIENGVKLGHRTMFIVIGDKARDQVPILYDILTKSTVKARPTVLWCYKNKDEAISNH 69

Query: 272 RKKRAKQIKKLCSAGYGPREADPFSSSR 355
            KKRA   KK+        EAD F S R
Sbjct: 70  GKKRA---KKIAVGKVDVNEADLFDSFR 94



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>YNN2_YEAST (P53914) Hypothetical UPF0202 protein YNL132w|
          Length = 1056

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
 Frame = +2

Query: 95  IRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNK-LEISSH 271
           I +LI NGV+ +QRS+F+IVGD++R+Q+ NL+Y++  + +K   SVLW Y+ K L  +SH
Sbjct: 10  IPSLIRNGVQTKQRSIFVIVGDRARNQLPNLHYLMMSADLKMNKSVLWAYKKKLLGFTSH 69

Query: 272 RKKRAKQIKKLCSAGYGP-READPFSS 349
           RKKR  +IKK    G     E DPF S
Sbjct: 70  RKKRENKIKKEIKRGTREVNEMDPFES 96



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>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)|
          Length = 1206

 Score = 34.7 bits (78), Expect = 0.058
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 172  PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAMQ 309
            P   P L     P  +A  + L++PQQ + QQ QEE +Q  Q+  Q
Sbjct: 902  PQAIPTLQLQSAPSTIADPQQLMVPQQQQQQQHQEEQQQQPQQQQQ 947



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>OCTB1_DROME (Q9VCZ3) Octopamine receptor beta-1 (DmOct-beta-1R) (DmOA2)|
          Length = 508

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -1

Query: 366 MSRSREEEKGSASRGP*PALHSFLICLARFFLWLLISSL 250
           +S  R E K + + G    + +FLIC   FFLW ++SSL
Sbjct: 339 ISTMRRERKAARTLGI--IMSAFLICWLPFFLWYIVSSL 375



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>HRS_DROME (Q960X8) Hepatocyte growth factor-regulated tyrosine kinase|
           substrate
          Length = 760

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +1

Query: 172 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAMQRG 315
           P +QPQ   GQ P+Q+   +    PQQ   QQPQ+   Q  Q   Q G
Sbjct: 658 PGQQPQQIPGQQPQQIPGQQ----PQQIPGQQPQQIPVQQPQPQPQMG 701



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>DPOG1_MOUSE (P54099) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial|
           DNA polymerase catalytic subunit) (PolG-alpha)
          Length = 1239

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +2

Query: 101 TLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKK 280
           T  +N   + QR M   + D + D       +L+  R K  P   W +  + ++   ++K
Sbjct: 429 TEAQNTYEELQREMKKSLMDLANDAC----QLLSGERYKEDP---WLWDLEWDLQEFKQK 481

Query: 281 RAKQIKKLCSAGYGPRE-ADPFSSSRD 358
           +AK++KK  SA   P E A PF    D
Sbjct: 482 KAKKVKKPASASKLPIEGAGPFGDPMD 508



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>SYG_AERPE (Q9YBF8) Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA|
           ligase) (GlyRS)
          Length = 583

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 208 PRQVAPLRALVLPQQARDQQPQEEARQADQEAMQRG 315
           PR +AP++A+VLP    D++  E AR   +  ++ G
Sbjct: 468 PRDIAPVQAVVLPLVENDEKLVERARMVYETLVEAG 503



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>AGO2_DROME (Q9VUQ5) Argonaute 2 protein|
          Length = 1214

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +1

Query: 178 RQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQE 300
           RQ Q    Q P+Q+   + L  PQQ + QQP ++ +Q+ ++
Sbjct: 30  RQQQPQQLQQPQQLQQPQQLQQPQQQQQQQPHQQQQQSSRQ 70



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>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein)
          Length = 883

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +1

Query: 178 RQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAMQR 312
           +QPQ    Q P+Q  P++    PQQ +  QP ++  Q  Q+A +R
Sbjct: 733 QQPQ--QAQQPQQAPPVQQ---PQQVQQAQPTQQQAQTQQQAQRR 772



 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 184 PQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQ 297
           P +   Q P+QV  ++    PQQA+     ++A+QA Q
Sbjct: 664 PSVQQSQPPQQVQQVQHAQPPQQAQKAPQAQQAQQAQQ 701



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>DPOG1_RAT (Q9QYV8) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial|
           DNA polymerase catalytic subunit) (PolG-alpha)
          Length = 1216

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 194 MLAKSRVKSRPSVLWCYRNKLEISSHRKKRAKQIKKLCSAGYGPRE-ADPFSSSRD 358
           +L+  R K  P   W +  + ++   ++K+AK++KK  SA   P E A PF    D
Sbjct: 455 LLSGERYKEDP---WLWDLEWDLQEFKQKKAKKVKKTASASKLPIEGAGPFGDPMD 507



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>NAB2_YEAST (P32505) Nuclear polyadenylated RNA-binding protein NAB2|
          Length = 525

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +1

Query: 172 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQ---ADQEAMQ 309
           P +QPQ    Q P+Q    +    PQQ   QQPQ +  Q     Q AMQ
Sbjct: 124 PQQQPQQQPQQQPQQQPQQQPQQQPQQQPQQQPQLQPLQPQLGTQNAMQ 172



 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 178 RQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAMQ 309
           +QP + A Q P+Q    +    PQQ   QQPQ++ +Q  Q+  Q
Sbjct: 115 QQPDI-AQQQPQQQPQQQPQQQPQQQPQQQPQQQPQQQPQQQPQ 157



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>PACC_TRIRU (Q9C1A4) pH-response transcription factor pacC/RIM101|
          Length = 758

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 244 PQQARDQQPQEEARQADQEAMQR 312
           PQQ + QQPQ++ +Q  Q+A Q+
Sbjct: 12  PQQQQQQQPQQQGQQQGQQAQQQ 34



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>DNJC9_HUMAN (Q8WXX5) DnaJ homolog subfamily C member 9 (DnaJ protein SB73)|
          Length = 260

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 181 QPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAMQRGL 318
           Q  + AG+VP   A ++       AR ++ QEEA++A+    + GL
Sbjct: 164 QQAIDAGEVPSYNAFVKESKQKMNARKRRAQEEAKEAEMSRKELGL 209



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>ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog|
          Length = 332

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +1

Query: 172 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAMQ 309
           P +QP       P+   PL+  V PQ A   QP   A Q  Q+A Q
Sbjct: 124 PVQQPVQQPAYQPQPEQPLQQPVSPQVASAPQPVHSAPQPAQQAFQ 169



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>PAT1_YEAST (P25644) Topoisomerase II-associated protein PAT1|
          Length = 796

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +1

Query: 172 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAMQRGLWTPRGRP 339
           P  Q  +     P+Q+APL+ ++  Q    QQ Q + +  +  AM      P+G P
Sbjct: 120 PSPQSTMAPAPAPQQMAPLQPILSMQDLERQQRQMQQQFMNFHAMGHPQGLPQGPP 175



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>NHL1_CAEEL (Q03601) RING finger protein nhl-1|
          Length = 974

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
 Frame = +1

Query: 172 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEA------RQADQEAMQRGLWTPRG 333
           PD Q Q  + +V + +A  ++ +      D++ ++ A      R A +EA   G W  RG
Sbjct: 640 PDIQAQFTSARVQQLLAERQSRLDSSTTTDEEKEKLAVLRQRGRSASREA---GEWRARG 696

Query: 334 RPLLLFSR 357
           RP  +F R
Sbjct: 697 RPRAVFGR 704



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>YUBO_CAEEL (Q93591) Hypothetical protein F26A3.7|
          Length = 297

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 269 HRKKRAKQIKKLCSAGYGPREADPFSSSRDLDI 367
           H+KKR +++K    AGY   E  PF   +D+++
Sbjct: 237 HQKKRDEKVK---DAGYAQGERRPFDREKDMEV 266



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>ANP1_YEAST (P32629) Mannan polymerase II complex ANP1 subunit (M-Pol II|
           subunit ANP1) (Aminonitrophenyl propanediol resistance
           protein)
          Length = 500

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 247 QQARDQQPQEEARQADQEAMQRGLWTPRGRPL 342
           QQ + QQ Q++ +Q  Q+  Q+    P+G+PL
Sbjct: 446 QQQQQQQQQQQQQQQQQQQQQQLDGNPQGKPL 477



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>UVRB_FUSNN (Q8RGR2) UvrABC system protein B (Protein uvrB) (Excinuclease ABC|
           subunit B)
          Length = 663

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +2

Query: 170 DQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKRAKQIKKL 304
           + ++NL+Y + + + ++   V   +RNK +I     K  K+IKKL
Sbjct: 596 EDLINLDYGIEEKKFENDKKV---FRNKTDIEKEITKLEKKIKKL 637



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>AMBN_MOUSE (O55189) Ameloblastin precursor|
          Length = 407

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 172 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQP 270
           P  QP +H GQ+P Q   L A   PQ A  + P
Sbjct: 132 PGPQPPMHPGQLPLQEGELIAPDEPQVAPSENP 164



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>DRG2_PHYBI (Q90ZK5) Dermaseptin DRG2 precursor (Dermaseptin-2)|
          Length = 77

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 238 VLPQQARDQQPQEEARQADQEAMQRGLWT 324
           +  ++ R+ + +EE    +Q  M+RGLW+
Sbjct: 21  ICEEEKRENEDEEEQEDDEQSEMKRGLWS 49



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>DRG1_PHYBI (Q90ZK3) Dermaseptin DRG1 precursor (Dermaseptin-1)|
          Length = 81

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 238 VLPQQARDQQPQEEARQADQEAMQRGLWT 324
           +  ++ R+ + +EE    +Q  M+RGLW+
Sbjct: 21  ICEEEKRENEDEEEQEDDEQSEMKRGLWS 49



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>DMS2_PHYBI (P31107) Adenoregulin precursor (Dermaseptin BII) (Dermaseptin B2)|
          Length = 81

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 238 VLPQQARDQQPQEEARQADQEAMQRGLWT 324
           +  ++ R+ + +EE    +Q  M+RGLW+
Sbjct: 21  ICEEEKRENEDEEEQEDDEQSEMKRGLWS 49



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>BSN_RAT (O88778) Bassoon protein|
          Length = 3937

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 172  PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAMQRGL 318
            P +     + Q P   A  +     QQ + QQ Q++ +Q  Q+  Q+GL
Sbjct: 3750 PQQSQPPSSRQTPSGTASRQPQTQQQQQQQQQQQQQQQQQQQQQQQQGL 3798



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>DPOLA_OXYNO (Q94636) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1492

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 272 RKKRAKQIKKLCSAGYGPREADPFSSSRDLD 364
           R+++++Q+K+  + G    + +PFS  R LD
Sbjct: 173 RRRQSEQLKQQANIGQNQSDVNPFSKKRKLD 203



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>RIBAB_CHLPN (Q9Z734) Riboflavin biosynthesis protein ribAB [Includes: GTP|
           cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II);
           3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
           synthase)]
          Length = 418

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 156 PTMMNMDRCRCRTPFSISV 100
           P M+  +RCR +TPF++SV
Sbjct: 81  PPMVKDNRCRFKTPFTVSV 99



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>HOR8_HORVU (P17991) C-hordein (Clone PC HOR1-3) (Fragment)|
          Length = 72

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = +1

Query: 181 QPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAMQR 312
           QPQ    Q P+Q  PL+    PQQ   QQPQ+   Q  Q   Q+
Sbjct: 3   QPQEPFPQQPQQPFPLQ----PQQPFPQQPQQPFPQPQQPFRQQ 42



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>KAPC_DICDI (P34099) cAMP-dependent protein kinase catalytic subunit (EC|
           2.7.11.11)
          Length = 648

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +1

Query: 172 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAMQ 309
           P +QPQ    Q P+Q  P +    PQQ + QQPQ++ +Q  Q+  Q
Sbjct: 139 PQQQPQQ---QQPQQQQPQQQQ--PQQQQQQQPQQQ-QQPQQQLQQ 178



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>GDB2_WHEAT (P08453) Gamma-gliadin precursor|
          Length = 327

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 181 QPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQ 297
           QPQ    QVP+   P +  + PQQ   QQPQ+   Q  Q
Sbjct: 62  QPQQ---QVPQPQQPQQPFLQPQQPFPQQPQQPFPQTQQ 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,827,967
Number of Sequences: 219361
Number of extensions: 533389
Number of successful extensions: 2129
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2104
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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