ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl24a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF479044.1| Triticum aestivum F1-ATPase mRNA, partial cds 555 e-155
2gb|AY103884.1| Zea mays PCO090977 mRNA sequence 178 1e-41
3dbj|AK071267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 9e-36
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 157 4e-35
5dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic D... 157 4e-35
6dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic D... 157 4e-35
7dbj|AK101953.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
8gb|BT016671.1| Zea mays clone Contig504 mRNA sequence 141 2e-30
9ref|XM_482388.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.094
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.094
11dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.094
12dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
13dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
14gb|AC152103.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A1, compl... 42 1.5
15ref|XM_990488.1| PREDICTED: Mus musculus hypothetical protein LO... 42 1.5
16gb|AY442327.1| Homo sapiens Werner syndrome (WRN) gene, complete... 42 1.5
17emb|AL354693.6| Human DNA sequence from clone RP11-14E8 on chrom... 42 1.5
18gb|AC009563.12| Homo sapiens chromosome 8, clone RP11-363L24, co... 42 1.5
19gb|AC092840.4| Homo sapiens BAC clone RP11-258O11 from 2, comple... 42 1.5
20gb|AF181897.1|HSWRNG2 Homo sapiens WRN (WRN) gene, complete cds 42 1.5
21emb|AL928589.11| Mouse DNA sequence from clone RP23-350C1 on chr... 42 1.5
22emb|AL844172.8| Zebrafish DNA sequence from clone DKEY-223H12, c... 42 1.5
23gb|AY674178.1| Ixodes pacificus clone D12_IPL_P19 NPL-2 mRNA, co... 40 5.8
24emb|AL353764.9| Human DNA sequence from clone RP11-440G5 on chro... 40 5.8
25dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 40 5.8
26ref|XM_214018.3| PREDICTED: Rattus norvegicus hypothetical LOC28... 40 5.8
27emb|AL935269.7| Zebrafish DNA sequence from clone DKEY-46J18, co... 40 5.8
28gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 5.8
29emb|AL607070.19| Mouse DNA sequence from clone RP23-31C9 on chro... 40 5.8
30gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 40 5.8 
>gb|AF479044.1| Triticum aestivum F1-ATPase mRNA, partial cds
          Length = 555

 Score =  555 bits (280), Expect = e-155
 Identities = 343/364 (94%)
 Strand = Plus / Plus

                                                                       
Query: 70  ctcctcctaggtttcgctctccaccaccgcggaacgaaccggaaatggcggcgcggcacc 129
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   ctcctcctaggtttcgctccccaccaccgcggaacgaaccggaaatggcggcgcggcacc 67

                                                                       
Query: 130 tcagatccggcctcccgctcctccaagcccgcctcgcggccaccgaatccgcggccgtcg 189
           |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 68  tcagatccggcctcccgctcctccaagcccgcctcgcggctaacgaatccgcggccgtcg 127

                                                                       
Query: 190 ctcaggtatcaagggggcttgcgacgcaggtggataagcctgcggagaacaagataaagg 249
           ||||||| || ||||||||||| ||| ||| ||||||||||  |||||||||||| ||||
Sbjct: 128 ctcaggtgtcgagggggcttgcaacggaggcggataagcctaaggagaacaagatcaagg 187

                                                                       
Query: 250 ttccaaaagctctgtatggtggcaccggcaactacgctagtgcgttgttccttgcagcag 309
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 188 ttccaaaagctctgtatggtggcacgggcaactacgctagtgcgttgttccttgcagcag 247

                                                                       
Query: 310 ccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgttgtaggggcagtca 369
           ||||| ||||||||||||||||||||||||| ||||||  ||||||||||||||||| ||
Sbjct: 248 ccaactcaaattcgttggaaaaagttgaatctgagattctcgatgttgtaggggcagcca 307

                                                                       
Query: 370 agaagagccctatgttttctcaattcataaaggactcatcagtgccaaaagcaaccaggg 429
           |||||||||||||||||||||||||||| |||||| |||||||||| |||| ||||||||
Sbjct: 308 agaagagccctatgttttctcaattcatgaaggacacatcagtgcctaaagaaaccaggg 367

               
Query: 430 tgaa 433
           ||||
Sbjct: 368 tgaa 371
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>gb|AY103884.1| Zea mays PCO090977 mRNA sequence
          Length = 1134

 Score =  178 bits (90), Expect = 1e-41
 Identities = 261/318 (82%)
 Strand = Plus / Plus

                                                                       
Query: 116 ggcggcgcggcacctcagatccggcctcccgctcctccaagcccgcctcgcggccaccga 175
           |||||||||||||||||||||||||||||| |||||||  |||| ||||||  || ||||
Sbjct: 127 ggcggcgcggcacctcagatccggcctccccctcctccgcgcccacctcgcatcctccga 186

                                                                       
Query: 176 atccgcggccgtcgctcaggtatcaagggggcttgcgacgcaggtggataagcctgcgga 235
           ||||||||||||||||||||| || |||||  | ||| ||||||  |  |||||  | | 
Sbjct: 187 atccgcggccgtcgctcaggtttcgaggggcttcgcgtcgcaggccgccaagcccaccgg 246

                                                                       
Query: 236 gaacaagataaaggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgtt 295
           |||  |||| ||||||||||| ||||||| ||| ||||| |||||||| || |||||  |
Sbjct: 247 gaaggagatcaaggttccaaaggctctgtttggcggcacaggcaactatgccagtgcact 306

                                                                       
Query: 296 gttccttgcagcagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgt 355
           ||||||  ||||||| ||  | ||| | ||||| ||||||||||| ||||||   | | |
Sbjct: 307 gttcctcacagcagctaaatctaatgcattggacaaagttgaatctgagattaaagctat 366

                                                                       
Query: 356 tgtaggggcagtcaagaagagccctatgttttctcaattcataaaggactcatcagtgcc 415
           ||||| |||   ||||||||||||  ||||||||||||||||||||||||  ||||| ||
Sbjct: 367 tgtagaggcttccaagaagagcccgttgttttctcaattcataaaggacttgtcagttcc 426

                             
Query: 416 aaaagcaaccagggtgaa 433
           |||||| |||||||||||
Sbjct: 427 aaaagcgaccagggtgaa 444
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>dbj|AK071267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086I22, full
           insert sequence
          Length = 1044

 Score =  159 bits (80), Expect = 9e-36
 Identities = 161/188 (85%)
 Strand = Plus / Plus

                                                                       
Query: 246 aaggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgttgttccttgca 305
           ||||||||| |||||||||||||||||||||||||||| ||||||||  |||||||| ||
Sbjct: 253 aaggttccagaagctctgtatggtggcaccggcaactatgctagtgctctgttccttaca 312

                                                                       
Query: 306 gcagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgttgtaggggca 365
           || ||||| || || | | |||| ||||||||| | |||||| |||||||||||| ||||
Sbjct: 313 gcggccaaagctaacttgctggacaaagttgaaactgagattcgcgatgttgtagaggca 372

                                                                       
Query: 366 gtcaagaagagccctatgttttctcaattcataaaggactcatcagtgccaaaagcaacc 425
             ||||||||| ||  |||||||||||||||| |||||||  |||||||| ||||  |||
Sbjct: 373 tccaagaagagtccattgttttctcaattcattaaggacttgtcagtgcccaaagagacc 432

                   
Query: 426 agggtgaa 433
           ||||||||
Sbjct: 433 agggtgaa 440



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                    
Query: 113 aatggcggcgcggcacctcagatccggcctcccgctcctcc 153
           ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 141 aatggcggcgcggcacctcagatccggcctccccctcctcc 181
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  157 bits (79), Expect = 4e-35
 Identities = 160/187 (85%)
 Strand = Plus / Plus

                                                                            
Query: 247      aggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgttgttccttgcag 306
                |||||||| |||||||||||||||||||||||||||| ||||||||  |||||||| |||
Sbjct: 26025462 aggttccagaagctctgtatggtggcaccggcaactatgctagtgctctgttccttacag 26025521

                                                                            
Query: 307      cagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgttgtaggggcag 366
                | ||||| || || | | |||| ||||||||| | |||||| |||||||||||| |||| 
Sbjct: 26025522 cggccaaagctaacttgctggacaaagttgaaactgagattcgcgatgttgtagaggcat 26025581

                                                                            
Query: 367      tcaagaagagccctatgttttctcaattcataaaggactcatcagtgccaaaagcaacca 426
                 ||||||||| ||  |||||||||||||||| |||||||  |||||||| ||||  ||||
Sbjct: 26025582 ccaagaagagtccattgttttctcaattcattaaggacttgtcagtgcccaaagagacca 26025641

                       
Query: 427      gggtgaa 433
                |||||||
Sbjct: 26025642 gggtgaa 26025648



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                         
Query: 113      aatggcggcgcggcacctcagatccggcctcccgctcctcc 153
                ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 26024588 aatggcggcgcggcacctcagatccggcctccccctcctcc 26024628



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 128      cctcagatccggcctcccgctcctcc 153
                |||||||||||||||||| |||||||
Sbjct: 13638902 cctcagatccggcctccctctcctcc 13638877
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>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1226_A12
          Length = 113025

 Score =  157 bits (79), Expect = 4e-35
 Identities = 160/187 (85%)
 Strand = Plus / Plus

                                                                         
Query: 247   aggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgttgttccttgcag 306
             |||||||| |||||||||||||||||||||||||||| ||||||||  |||||||| |||
Sbjct: 63320 aggttccagaagctctgtatggtggcaccggcaactatgctagtgctctgttccttacag 63379

                                                                         
Query: 307   cagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgttgtaggggcag 366
             | ||||| || || | | |||| ||||||||| | |||||| |||||||||||| |||| 
Sbjct: 63380 cggccaaagctaacttgctggacaaagttgaaactgagattcgcgatgttgtagaggcat 63439

                                                                         
Query: 367   tcaagaagagccctatgttttctcaattcataaaggactcatcagtgccaaaagcaacca 426
              ||||||||| ||  |||||||||||||||| |||||||  |||||||| ||||  ||||
Sbjct: 63440 ccaagaagagtccattgttttctcaattcattaaggacttgtcagtgcccaaagagacca 63499

                    
Query: 427   gggtgaa 433
             |||||||
Sbjct: 63500 gggtgaa 63506



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                      
Query: 113   aatggcggcgcggcacctcagatccggcctcccgctcctcc 153
             ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 62446 aatggcggcgcggcacctcagatccggcctccccctcctcc 62486
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>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0062J02
          Length = 151636

 Score =  157 bits (79), Expect = 4e-35
 Identities = 160/187 (85%)
 Strand = Plus / Plus

                                                                        
Query: 247  aggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgttgttccttgcag 306
            |||||||| |||||||||||||||||||||||||||| ||||||||  |||||||| |||
Sbjct: 4707 aggttccagaagctctgtatggtggcaccggcaactatgctagtgctctgttccttacag 4766

                                                                        
Query: 307  cagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgttgtaggggcag 366
            | ||||| || || | | |||| ||||||||| | |||||| |||||||||||| |||| 
Sbjct: 4767 cggccaaagctaacttgctggacaaagttgaaactgagattcgcgatgttgtagaggcat 4826

                                                                        
Query: 367  tcaagaagagccctatgttttctcaattcataaaggactcatcagtgccaaaagcaacca 426
             ||||||||| ||  |||||||||||||||| |||||||  |||||||| ||||  ||||
Sbjct: 4827 ccaagaagagtccattgttttctcaattcattaaggacttgtcagtgcccaaagagacca 4886

                   
Query: 427  gggtgaa 433
            |||||||
Sbjct: 4887 gggtgaa 4893



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                     
Query: 113  aatggcggcgcggcacctcagatccggcctcccgctcctcc 153
            ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3833 aatggcggcgcggcacctcagatccggcctccccctcctcc 3873
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>dbj|AK101953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075I24, full
            insert sequence
          Length = 2362

 Score =  151 bits (76), Expect = 2e-33
 Identities = 160/188 (85%)
 Strand = Plus / Plus

                                                                        
Query: 246  aaggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgttgttccttgca 305
            ||||||||| |||||||||||||||||||||||||||| ||||||||  |||||||| ||
Sbjct: 1607 aaggttccagaagctctgtatggtggcaccggcaactatgctagtgctctgttccttaca 1666

                                                                        
Query: 306  gcagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgttgtaggggca 365
            || ||||| || || | | |||| ||||||||| | |||||| |||||||||||| ||||
Sbjct: 1667 gcggccaaagctaacttgctggacaaagttgaaactgagattcgcgatgttgtagaggca 1726

                                                                        
Query: 366  gtcaagaagagccctatgttttctcaattcataaaggactcatcagtgccaaaagcaacc 425
              ||||||||| ||  |||||||||||| ||| |||||||  |||||||| ||||  |||
Sbjct: 1727 tccaagaagagtccattgttttctcaatccattaaggacttgtcagtgcccaaagagacc 1786

                    
Query: 426  agggtgaa 433
            ||||||||
Sbjct: 1787 agggtgaa 1794



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                     
Query: 113  aatggcggcgcggcacctcagatccggcctcccgctcctcc 153
            ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1495 aatggcggcgcggcacctcagatccggcctccccctcctcc 1535
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>gb|BT016671.1| Zea mays clone Contig504 mRNA sequence
          Length = 1081

 Score =  141 bits (71), Expect = 2e-30
 Identities = 258/319 (80%), Gaps = 1/319 (0%)
 Strand = Plus / Plus

                                                                       
Query: 116 ggcggcgcggcac-ctcagatccggcctcccgctcctccaagcccgcctcgcggccaccg 174
           ||||||||||||| |||| | |||||||||| |||||||  |||| ||||||  || |||
Sbjct: 83  ggcggcgcggcactctcaaagccggcctccccctcctccgcgcccacctcgcatcctccg 142

                                                                       
Query: 175 aatccgcggccgtcgctcaggtatcaagggggcttgcgacgcaggtggataagcctgcgg 234
           |||||||||||||||||||||| || |||||  | ||| ||||||  |  |||||  | |
Sbjct: 143 aatccgcggccgtcgctcaggtttcgaggggcttcgcgtcgcaggccgccaagcccaccg 202

                                                                       
Query: 235 agaacaagataaaggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgt 294
            |||  |||  ||||||||||| ||||||| ||| ||||| |||||||| || |||||  
Sbjct: 203 ggaaggagagcaaggttccaaaggctctgtttggcggcacaggcaactatgccagtgcac 262

                                                                       
Query: 295 tgttccttgcagcagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatg 354
           |||||||  ||||||| ||  | ||| | ||||| ||||||||||| ||||||   | | 
Sbjct: 263 tgttcctcacagcagctaaatctaatgcattggacaaagttgaatctgagattaaagcta 322

                                                                       
Query: 355 ttgtaggggcagtcaagaagagccctatgttttctcaattcataaaggactcatcagtgc 414
           |||||| |||   ||||||||||||  ||||||||||||||||||||||||  ||||| |
Sbjct: 323 ttgtagaggcttccaagaagagcccgttgttttctcaattcataaaggacttgtcagttc 382

                              
Query: 415 caaaagcaaccagggtgaa 433
           ||||||| |||||||||||
Sbjct: 383 caaaagcgaccagggtgaa 401
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>ref|XM_482388.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 672

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 114 atggcggcgcggcacctcagatccggcctcc 144
           |||||||||||||||  ||||||||||||||
Sbjct: 349 atggcggcgcggcacgccagatccggcctcc 379
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 114      atggcggcgcggcacctcagatccggcctcc 144
                |||||||||||||||  ||||||||||||||
Sbjct: 19762794 atggcggcgcggcacgccagatccggcctcc 19762824
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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0007M04
          Length = 176293

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 114   atggcggcgcggcacctcagatccggcctcc 144
             |||||||||||||||  ||||||||||||||
Sbjct: 91745 atggcggcgcggcacgccagatccggcctcc 91775
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>dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021N09
          Length = 156565

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 128   cctcagatccggcctcccgctcctcc 153
             |||||||||||||||||| |||||||
Sbjct: 46235 cctcagatccggcctccctctcctcc 46210
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>dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0459H02
          Length = 168230

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 128    cctcagatccggcctcccgctcctcc 153
              |||||||||||||||||| |||||||
Sbjct: 167392 cctcagatccggcctccctctcctcc 167367
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>gb|AC152103.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A1, complete sequence
          Length = 40624

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 82    ttcgctctccaccaccgcgga 102
             |||||||||||||||||||||
Sbjct: 19554 ttcgctctccaccaccgcgga 19574
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>ref|XM_990488.1| PREDICTED: Mus musculus hypothetical protein LOC667420 (LOC667420),
           mRNA
          Length = 507

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 146 gctcctccaagcccgcctcgcggcc 170
           ||||||||||||||| |||||||||
Sbjct: 269 gctcctccaagcccggctcgcggcc 245
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>gb|AY442327.1| Homo sapiens Werner syndrome (WRN) gene, complete cds
          Length = 143624

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 379    ctatgttttctcaattcataa 399
              |||||||||||||||||||||
Sbjct: 133095 ctatgttttctcaattcataa 133075
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>emb|AL354693.6| Human DNA sequence from clone RP11-14E8 on chromosome 1 Contains the
             part of the EDARADD gene for EDAR-associated death domain
             and two CpG islands, complete sequence
          Length = 78986

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    cctcctccccgacccgatctc 69
             |||||||||||||||||||||
Sbjct: 24119 cctcctccccgacccgatctc 24099
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>gb|AC009563.12| Homo sapiens chromosome 8, clone RP11-363L24, complete sequence
          Length = 189944

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 379    ctatgttttctcaattcataa 399
              |||||||||||||||||||||
Sbjct: 101499 ctatgttttctcaattcataa 101519
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>gb|AC092840.4| Homo sapiens BAC clone RP11-258O11 from 2, complete sequence
          Length = 133042

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 379    ctatgttttctcaattcataa 399
              |||||||||||||||||||||
Sbjct: 127281 ctatgttttctcaattcataa 127301
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>gb|AF181897.1|HSWRNG2 Homo sapiens WRN (WRN) gene, complete cds
          Length = 87543

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 379   ctatgttttctcaattcataa 399
             |||||||||||||||||||||
Sbjct: 45123 ctatgttttctcaattcataa 45103
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>emb|AL928589.11| Mouse DNA sequence from clone RP23-350C1 on chromosome 2, complete
              sequence
          Length = 209053

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 146    gctcctccaagcccgcctcgcggcc 170
              ||||||||||||||| |||||||||
Sbjct: 181888 gctcctccaagcccggctcgcggcc 181912
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>emb|AL844172.8| Zebrafish DNA sequence from clone DKEY-223H12, complete sequence
          Length = 163195

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 390    caattcataaaggactcatca 410
              |||||||||||||||||||||
Sbjct: 126120 caattcataaaggactcatca 126100
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>gb|AY674178.1| Ixodes pacificus clone D12_IPL_P19 NPL-2 mRNA, complete cds
          Length = 237

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 gccaccgaatccgcggccgt 187
           ||||||||||||||||||||
Sbjct: 189 gccaccgaatccgcggccgt 170
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>emb|AL353764.9| Human DNA sequence from clone RP11-440G5 on chromosome 9 Contains the
             NFIL3 gene for interleukin 3 regulated nuclear factor, a
             novel gene and two CpG islands, complete sequence
          Length = 170898

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   atgttttctcaattcataaa 400
             ||||||||||||||||||||
Sbjct: 47439 atgttttctcaattcataaa 47420
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    ccggaaatggcggcgcggca 127
              ||||||||||||||||||||
Sbjct: 346237 ccggaaatggcggcgcggca 346218
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>ref|XM_214018.3| PREDICTED: Rattus norvegicus hypothetical LOC289530 (predicted)
           (LOC289530), mRNA
          Length = 1163

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 44  ctcttcctcctccccgaccc 63
           ||||||||||||||||||||
Sbjct: 447 ctcttcctcctccccgaccc 466
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>emb|AL935269.7| Zebrafish DNA sequence from clone DKEY-46J18, complete sequence
          Length = 177658

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    cctcccgctcctccaagccc 159
              ||||||||||||||||||||
Sbjct: 175039 cctcccgctcctccaagccc 175020
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    cgagattggcgatgttgtag 360
              ||||||||||||||||||||
Sbjct: 304271 cgagattggcgatgttgtag 304252
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>emb|AL607070.19| Mouse DNA sequence from clone RP23-31C9 on chromosome 4, complete
              sequence
          Length = 215106

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 255    aaagctctgtatggtggcaccggc 278
              |||||||||||||||| |||||||
Sbjct: 196174 aaagctctgtatggtgacaccggc 196197
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 108     ccggaaatggcggcgcggca 127
               ||||||||||||||||||||
Sbjct: 1274567 ccggaaatggcggcgcggca 1274586


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,041,206
Number of Sequences: 3902068
Number of extensions: 4041206
Number of successful extensions: 77025
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76847
Number of HSP's gapped (non-prelim): 178
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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