>JHD1A_HUMAN (Q9Y2K7) JmjC domain-containing histone demethylation protein 1A|
           (EC 1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
           leucine-rich repeat protein 11) (F-box protein FBL7)
           (F-box protein Lilina)
          Length = 1162

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 363 PSLRPRRGDERRASGEEQQEE 301
           P+  P+RGDE    GEE++EE
Sbjct: 841 PARTPQRGDEEGLGGEEEEEE 861

>IL16_MACMU (O62675) Interleukin-16 precursor (IL-16) (Lymphocyte|
           chemoattractant factor) (LCF)
          Length = 630

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -1

Query: 366 APSLRPRRGDERRASGEEQQEERASRASSHGASCV*LCVSSRLTDRPSNGSPGADLGQ 193
           AP+ R   G   RAS     ++R S   + G+S +    + RL+ +PS+G     LG+
Sbjct: 118 APASREHLGPHIRASSSSSIKQRISSFETFGSSQLPDKGAQRLSLQPSSGEAAKPLGK 175

>IL16_MACFA (O62676) Interleukin-16 precursor (IL-16) (Lymphocyte|
           chemoattractant factor) (LCF)
          Length = 630

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -1

Query: 366 APSLRPRRGDERRASGEEQQEERASRASSHGASCV*LCVSSRLTDRPSNGSPGADLGQ 193
           AP+ R   G   RAS     ++R S   + G+S +    + RL+ +PS+G     LG+
Sbjct: 118 APASREHLGPHIRASSSSSIKQRISSFETFGSSQLPDKGAQRLSLQPSSGEAAKPLGK 175

>RS3_CORGL (Q8NT01) 30S ribosomal protein S3|
          Length = 248

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 375 GRVAPSLRPRRGDERRASGEEQQE 304
           GR   + RPRRG +RR   E++QE
Sbjct: 224 GRGDRNARPRRGGQRRQRAEQKQE 247

>RS3_COREF (P59181) 30S ribosomal protein S3|
          Length = 248

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 375 GRVAPSLRPRRGDERRASGEEQQE 304
           GR   + RPRRG +RR   E++QE
Sbjct: 224 GRGDRNARPRRGGQRRQRAEQKQE 247

>JHD1A_MOUSE (P59997) JmjC domain-containing histone demethylation protein 1A|
           (EC 1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
           leucine-rich repeat protein 11)
          Length = 1161

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 363 PSLRPRRGDERRASGEEQQEERASRASS 280
           P+  P+ GDE    GEE++EE      S
Sbjct: 841 PARNPQHGDEEGLGGEEEEEEEEEEDDS 868


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,070,480
Number of Sequences: 219361
Number of extensions: 371017
Number of successful extensions: 1173
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)