ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl23g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
2dbj|AK112003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.16
3dbj|AK111549.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.16
4gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.16
5emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 42 0.64
6gb|DQ214362.1| Taeniopygia guttata clone 0065P0009D08 leucine-zi... 40 2.5
7gb|AC169509.1| Mus musculus BAC clone RP23-137L8 from chromosome... 40 2.5
8gb|BT018275.1| Zea mays clone EL01T0203F04.c mRNA sequence 40 2.5
9gb|AC093104.2| Drosophila melanogaster clone BACR38O04, complete... 40 2.5
10ref|XM_546176.2| PREDICTED: Canis familiaris similar to zinc fin... 40 2.5
11emb|BX294129.10| Zebrafish DNA sequence from clone DKEYP-34H12 i... 40 2.5
12gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell... 40 2.5
13gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswel... 40 2.5
14ref|NM_165585.1| Drosophila melanogaster CG12769-RB, transcript ... 40 2.5
15ref|NM_136503.2| Drosophila melanogaster CG12769-RA, transcript ... 40 2.5
16gb|AY070889.1| Drosophila melanogaster LD46223 full length cDNA 40 2.5
17emb|BX932133.2| Gallus gallus finished cDNA, clone ChEST1032g23 40 2.5
18gb|AC068252.9| Mus musculus chromosome 5, clone RP23-312J7, comp... 40 2.5
19gb|AY112569.1| Zea mays CL3104_1 mRNA sequence 40 2.5
20gb|AE003838.3| Drosophila melanogaster chromosome 2R, section 12... 40 2.5
21gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32... 40 2.5
22gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62... 40 2.5
23gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, r... 40 2.5
24gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, ... 40 2.5
25gb|AC005473.1|AC005473 Drosophila melanogaster, chromosome 2R, r... 40 2.5
26gb|AC102273.9| Mus musculus chromosome 3, clone RP24-285I22, com... 38 10.0
27gb|DQ213234.1| Taeniopygia guttata clone 0061P0005C07 MGC80493- ... 38 10.0
28gb|DQ213128.1| Taeniopygia guttata clone 0058P0028C05 mRNA sequence 38 10.0
29gb|AC005222.1| Homo sapiens chromosome 16, cosmid clone RT163 (L... 38 10.0
30gb|AC099037.2| Drosophila melanogaster clone BACR27P17, complete... 38 10.0
31ref|XM_420194.1| PREDICTED: Gallus gallus similar to hepatitis C... 38 10.0
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 10.0
33gb|AC141481.4| Mus musculus BAC clone RP23-145E16 from chromosom... 38 10.0
34gb|AC129212.4| Mus musculus BAC clone RP24-373G21 from chromosom... 38 10.0
35gb|AC125381.4| Mus musculus BAC clone RP23-250N10 from chromosom... 38 10.0
36gb|AC087568.3| Pan troglodytes clone RP43-135M11, complete sequence 38 10.0
37gb|AC125213.3| Mus musculus BAC clone RP23-136A14 from 7, comple... 38 10.0
38gb|AC122807.3| Mus musculus BAC clone RP23-297H3 from 8, complet... 38 10.0
39gb|AC117183.3| Mus musculus BAC clone RP23-37B19 from 19, comple... 38 10.0
40emb|CR708035.2|CNS0G99R Tetraodon nigroviridis full-length cDNA 38 10.0
41emb|CR707896.2|CNS0G95W Tetraodon nigroviridis full-length cDNA 38 10.0
42gb|AC137839.19| Medicago truncatula clone mth2-34j11, complete s... 38 10.0
43gb|AC147483.13| Medicago truncatula clone mth2-22o7, complete se... 38 10.0
44emb|AL591594.9| Human DNA sequence from clone RP11-424N15 on chr... 38 10.0
45emb|AL358794.19| Human DNA sequence from clone RP11-430L17 on ch... 38 10.0
46gb|AC096363.8| Rattus norvegicus 1 BAC CH230-54P17 (Children's H... 38 10.0
47emb|X58519.1|GGINTA8 Chicken mRNA for integrin alpha 8 subunit 38 10.0
48emb|BX294146.1| Pirellula sp. strain 1 complete genome; segment ... 38 10.0
49emb|AL162754.2|NMA3Z2491 Neisseria meningitidis serogroup A stra... 38 10.0
50emb|AJ003022.1|SCA32WHIH Streptomyces coelicolor whiH gene 38 10.0
51emb|AJ720510.1| Gallus gallus mRNA for hypothetical protein, clo... 38 10.0
52emb|AJ720427.1| Gallus gallus mRNA for hypothetical protein, clo... 38 10.0
53emb|AL844600.3| Mouse DNA sequence from clone RP24-92D2 on chrom... 38 10.0
54ref|NM_205288.1| Gallus gallus integrin, alpha 8 (ITGA8), mRNA 38 10.0
55ref|NM_205509.1| Gallus gallus fibroblast growth factor receptor... 38 10.0
56gb|AC148484.17| Medicago truncatula clone mth2-46g10, complete s... 38 10.0
57gb|AC012676.5| Homo sapiens chromosome 16 clone RP11-295D4, comp... 38 10.0
58gb|AC005089.3| Homo sapiens BAC clone CTA-315H11 from 7, complet... 38 10.0
59gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genom... 38 10.0
60gb|AE002098.2| Neisseria meningitidis MC58, complete genome 38 10.0
61dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
62dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
63dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
64dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
65dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
66gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, r... 38 10.0
67gb|AC023830.9| Homo sapiens chromosome 16 clone RP11-709D24, com... 38 10.0
68emb|BX930592.1| Gallus gallus finished cDNA, clone ChEST969m22 38 10.0
69ref|NM_001039321.1| Gallus gallus similar to hyperpolarization-a... 38 10.0
70gb|AC027601.25| Homo sapiens chromosome 17, clone RP11-455O6, co... 38 10.0
71gb|AC091712.3| Rattus norvegicus strain Brown Norway clone RP31-... 38 10.0
72dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
73dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
74dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
75dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
76dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
77emb|X70342.1|GGNCAMA G.gallus NCAM gene 38 10.0
78dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
79gb|AC099736.10| Mus musculus chromosome 15, clone RP23-228F5, co... 38 10.0
80gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72... 38 10.0
81gb|U95088.1|GGU95088 Gallus gallus progesterone receptor binding... 38 10.0
82gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromos... 38 10.0
83gb|AC171010.3| Gallus gallus BAC clone CH261-161I5 from chromoso... 38 10.0
84gb|AC132138.2| Mus musculus BAC clone RP23-178E7 from 8, complet... 38 10.0
85emb|BX927192.15| Zebrafish DNA sequence from clone DKEY-56M20 in... 38 10.0
86gb|M15860.1|CHKNCAM01 Chicken neural cell-adhesion molecule (N-C... 38 10.0
87gb|M35195.1|CHKCEK2 Chicken tyrosine kinase (cek2) mRNA, complet... 38 10.0 
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 68      ggatcggagcggagcggagcgg 89
               ||||||||||||||||||||||
Sbjct: 4900711 ggatcggagcggagcggagcgg 4900690
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>dbj|AK112003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F01,
          full insert sequence
          Length = 947

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 68 ggatcggagcggagcggagcgg 89
          ||||||||||||||||||||||
Sbjct: 88 ggatcggagcggagcggagcgg 67
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>dbj|AK111549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057C14, full
           insert sequence
          Length = 2920

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 68  ggatcggagcggagcggagcgg 89
           ||||||||||||||||||||||
Sbjct: 109 ggatcggagcggagcggagcgg 88
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
              complete sequence
          Length = 187956

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 68     ggatcggagcggagcggagcgg 89
              ||||||||||||||||||||||
Sbjct: 173119 ggatcggagcggagcggagcgg 173098
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 66      tgggatcggagcggagcggag 86
               |||||||||||||||||||||
Sbjct: 2833758 tgggatcggagcggagcggag 2833738
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>gb|DQ214362.1| Taeniopygia guttata clone 0065P0009D08 leucine-zipper motif 2
          variant 1-like mRNA, complete sequence
          Length = 1274

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 67 gggatcggagcggagcggagcggc 90
          |||| |||||||||||||||||||
Sbjct: 8  gggagcggagcggagcggagcggc 31
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>gb|AC169509.1| Mus musculus BAC clone RP23-137L8 from chromosome 16, complete sequence
          Length = 206061

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    ataatggtaactgtgcatgg 152
              ||||||||||||||||||||
Sbjct: 112492 ataatggtaactgtgcatgg 112511
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>gb|BT018275.1| Zea mays clone EL01T0203F04.c mRNA sequence
          Length = 1326

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 72 cggagcggagcggagcggca 91
          ||||||||||||||||||||
Sbjct: 69 cggagcggagcggagcggca 50
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>gb|AC093104.2| Drosophila melanogaster clone BACR38O04, complete sequence
          Length = 167107

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    atcggagcggagcggagcgg 89
             ||||||||||||||||||||
Sbjct: 77131 atcggagcggagcggagcgg 77112
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>ref|XM_546176.2| PREDICTED: Canis familiaris similar to zinc finger protein 503
            (LOC489058), mRNA
          Length = 2339

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   gctcctccctcccccctgcc 111
            ||||||||||||||||||||
Sbjct: 2331 gctcctccctcccccctgcc 2312
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>emb|BX294129.10| Zebrafish DNA sequence from clone DKEYP-34H12 in linkage group 13,
             complete sequence
          Length = 156627

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    gggatcggagcggagcggag 86
             ||||||||||||||||||||
Sbjct: 74110 gggatcggagcggagcggag 74129
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>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     ggagcggagcggagcggcag 92
              ||||||||||||||||||||
Sbjct: 120680 ggagcggagcggagcggcag 120699
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>gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 173109

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ggagcggagcggagcggcag 92
             ||||||||||||||||||||
Sbjct: 20254 ggagcggagcggagcggcag 20273
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>ref|NM_165585.1| Drosophila melanogaster CG12769-RB, transcript variant B (CG12769),
            mRNA
          Length = 2958

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   atcggagcggagcggagcgg 89
            ||||||||||||||||||||
Sbjct: 2512 atcggagcggagcggagcgg 2531
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>ref|NM_136503.2| Drosophila melanogaster CG12769-RA, transcript variant A (CG12769),
            mRNA
          Length = 3866

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   atcggagcggagcggagcgg 89
            ||||||||||||||||||||
Sbjct: 3420 atcggagcggagcggagcgg 3439
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>gb|AY070889.1| Drosophila melanogaster LD46223 full length cDNA
          Length = 3902

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   atcggagcggagcggagcgg 89
            ||||||||||||||||||||
Sbjct: 3414 atcggagcggagcggagcgg 3433
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>emb|BX932133.2| Gallus gallus finished cDNA, clone ChEST1032g23
          Length = 833

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 72 cggagcggagcggagcggcagctc 95
          ||||||||||||||||||| ||||
Sbjct: 31 cggagcggagcggagcggcggctc 8
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>gb|AC068252.9| Mus musculus chromosome 5, clone RP23-312J7, complete sequence
          Length = 190438

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     gctcctccctcccccctgcc 111
              ||||||||||||||||||||
Sbjct: 117071 gctcctccctcccccctgcc 117052
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>gb|AY112569.1| Zea mays CL3104_1 mRNA sequence
          Length = 1317

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   cggagcggagcggagcggca 91
            ||||||||||||||||||||
Sbjct: 1270 cggagcggagcggagcggca 1289
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>gb|AE003838.3| Drosophila melanogaster chromosome 2R, section 12 of 73 of the complete
             sequence
          Length = 226833

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    atcggagcggagcggagcgg 89
             ||||||||||||||||||||
Sbjct: 11706 atcggagcggagcggagcgg 11687
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>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete
             sequence
          Length = 291923

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    gagcggagcggagcggcagc 93
             ||||||||||||||||||||
Sbjct: 61449 gagcggagcggagcggcagc 61468
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>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the complete
             sequence
          Length = 290640

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ggagcggagcggagcggcag 92
             ||||||||||||||||||||
Sbjct: 99148 ggagcggagcggagcggcag 99167
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>gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, region 50A2-50A3, P1 clones
              DS08976 and DS01149, complete sequence
          Length = 129605

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     gagcggagcggagcggcagc 93
              ||||||||||||||||||||
Sbjct: 102305 gagcggagcggagcggcagc 102324
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>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds;
             chivosazol biosynthetic gene cluster, complete sequence;
             and hypothetical protein gene, complete cds
          Length = 96547

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    cggagcggcagctcctccctcccc 105
             ||||||||||||||||| ||||||
Sbjct: 58155 cggagcggcagctcctcgctcccc 58132
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>gb|AC005473.1|AC005473 Drosophila melanogaster, chromosome 2R, region 44A3-44A4, P1 clone
             DS02142, complete sequence
          Length = 76743

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    atcggagcggagcggagcgg 89
             ||||||||||||||||||||
Sbjct: 57218 atcggagcggagcggagcgg 57237
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>gb|AC102273.9| Mus musculus chromosome 3, clone RP24-285I22, complete sequence
          Length = 162779

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 92    gctcctccctcccccctgc 110
             |||||||||||||||||||
Sbjct: 79061 gctcctccctcccccctgc 79043
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>gb|DQ213234.1| Taeniopygia guttata clone 0061P0005C07 MGC80493- and Q86T64-like
           mRNA, complete sequence
          Length = 1245

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 78  ggagcggagcggcagctcc 96
           |||||||||||||||||||
Sbjct: 268 ggagcggagcggcagctcc 250
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>gb|DQ213128.1| Taeniopygia guttata clone 0058P0028C05 mRNA sequence
          Length = 569

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 67  gggatcggagcggagcggagcgg 89
           |||| ||||||||||||||||||
Sbjct: 256 gggagcggagcggagcggagcgg 234



 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 72  cggagcggagcggagcggc 90
           |||||||||||||||||||
Sbjct: 246 cggagcggagcggagcggc 228
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>gb|AC005222.1| Homo sapiens chromosome 16, cosmid clone RT163 (LANL), complete
             sequence
          Length = 40619

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 83    ggagcggcagctcctccct 101
             |||||||||||||||||||
Sbjct: 21896 ggagcggcagctcctccct 21878
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>gb|AC099037.2| Drosophila melanogaster clone BACR27P17, complete sequence
          Length = 193320

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 90   cagctcctccctcccccct 108
            |||||||||||||||||||
Sbjct: 4519 cagctcctccctcccccct 4501
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>ref|XM_420194.1| PREDICTED: Gallus gallus similar to hepatitis C virus
          core-binding protein 6; cervical cancer oncogene 3
          (LOC422200), mRNA
          Length = 898

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 72 cggagcggagcggagcggc 90
          |||||||||||||||||||
Sbjct: 10 cggagcggagcggagcggc 28
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 71       tcggagcggagcggagcgg 89
                |||||||||||||||||||
Sbjct: 16235393 tcggagcggagcggagcgg 16235375
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>gb|AC141481.4| Mus musculus BAC clone RP23-145E16 from chromosome 15, complete
             sequence
          Length = 195197

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 142   actgtgcatggatttgcca 160
             |||||||||||||||||||
Sbjct: 16921 actgtgcatggatttgcca 16903
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>gb|AC129212.4| Mus musculus BAC clone RP24-373G21 from chromosome 15, complete sequence
          Length = 174846

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 142    actgtgcatggatttgcca 160
              |||||||||||||||||||
Sbjct: 133521 actgtgcatggatttgcca 133503
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>gb|AC125381.4| Mus musculus BAC clone RP23-250N10 from chromosome 19, complete
            sequence
          Length = 155214

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 93   ctcctccctcccccctgcc 111
            |||||||||||||||||||
Sbjct: 6201 ctcctccctcccccctgcc 6219
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>gb|AC087568.3| Pan troglodytes clone RP43-135M11, complete sequence
          Length = 150199

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    gcggagcggcagctcctcc 99
             |||||||||||||||||||
Sbjct: 44110 gcggagcggcagctcctcc 44092
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>gb|AC125213.3| Mus musculus BAC clone RP23-136A14 from 7, complete sequence
          Length = 194309

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    cagctcctccctcccccct 108
             |||||||||||||||||||
Sbjct: 68880 cagctcctccctcccccct 68898
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>gb|AC122807.3| Mus musculus BAC clone RP23-297H3 from 8, complete sequence
          Length = 210372

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 67     gggatcggagcggagcggagcgg 89
              |||| ||||||||||||||||||
Sbjct: 150068 gggagcggagcggagcggagcgg 150090
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>gb|AC117183.3| Mus musculus BAC clone RP23-37B19 from 19, complete sequence
          Length = 190192

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 93     ctcctccctcccccctgcc 111
              |||||||||||||||||||
Sbjct: 159896 ctcctccctcccccctgcc 159914
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>emb|CR708035.2|CNS0G99R Tetraodon nigroviridis full-length cDNA
          Length = 652

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 72 cggagcggagcggagcggc 90
          |||||||||||||||||||
Sbjct: 37 cggagcggagcggagcggc 55
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>emb|CR707896.2|CNS0G95W Tetraodon nigroviridis full-length cDNA
          Length = 651

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 72 cggagcggagcggagcggc 90
          |||||||||||||||||||
Sbjct: 37 cggagcggagcggagcggc 55
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>gb|AC137839.19| Medicago truncatula clone mth2-34j11, complete sequence
          Length = 145073

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 147 gcatggatttgccaatggt 165
           |||||||||||||||||||
Sbjct: 465 gcatggatttgccaatggt 447
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>gb|AC147483.13| Medicago truncatula clone mth2-22o7, complete sequence
          Length = 142205

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 147    gcatggatttgccaatggt 165
              |||||||||||||||||||
Sbjct: 141741 gcatggatttgccaatggt 141759
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>emb|AL591594.9| Human DNA sequence from clone RP11-424N15 on chromosome 1 Contains the 5'
              end of the ADSS gene for adenylosuccinate synthase, the 5'
              end of the gene for a novel protein (DKFZp686A0738,
              FLJ23552) and two CpG islands, complete sequence
          Length = 152313

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 138    ggtaactgtgcatggattt 156
              |||||||||||||||||||
Sbjct: 105961 ggtaactgtgcatggattt 105943
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>emb|AL358794.19| Human DNA sequence from clone RP11-430L17 on chromosome 1 Contains the 5'
              end of a novel gene (KIAA1332), a ribosomal protein L22
              (RPL22) pseudogene, a putative MAPK activating protein
              (DKFZp566C0424), a novel gene (LOC374955) and two CpG
              islands, complete sequence
          Length = 124949

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 88     ggcagctcctccctcccccctgc 110
              |||| ||||||||||||||||||
Sbjct: 110158 ggcacctcctccctcccccctgc 110180
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>gb|AC096363.8| Rattus norvegicus 1 BAC CH230-54P17 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 215356

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 93     ctcctccctcccccctgcc 111
              |||||||||||||||||||
Sbjct: 126975 ctcctccctcccccctgcc 126957
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>emb|X58519.1|GGINTA8 Chicken mRNA for integrin alpha 8 subunit
          Length = 3529

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 72 cggagcggagcggagcggc 90
          |||||||||||||||||||
Sbjct: 88 cggagcggagcggagcggc 70
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>emb|BX294146.1| Pirellula sp. strain 1 complete genome; segment 14/24
          Length = 324450

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 105   ccctgccgcggcggtcacc 123
             |||||||||||||||||||
Sbjct: 86872 ccctgccgcggcggtcacc 86890
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>emb|AL162754.2|NMA3Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment
              3/7
          Length = 311321

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 89     gcagctcctccctcccccc 107
              |||||||||||||||||||
Sbjct: 115557 gcagctcctccctcccccc 115539
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>emb|AJ003022.1|SCA32WHIH Streptomyces coelicolor whiH gene
          Length = 3500

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 72  cggagcggagcggagcggc 90
           |||||||||||||||||||
Sbjct: 942 cggagcggagcggagcggc 924
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>emb|AJ720510.1| Gallus gallus mRNA for hypothetical protein, clone 19f2
          Length = 1385

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 72 cggagcggagcggagcggc 90
          |||||||||||||||||||
Sbjct: 39 cggagcggagcggagcggc 21
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>emb|AJ720427.1| Gallus gallus mRNA for hypothetical protein, clone 17g5
          Length = 2709

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 72 cggagcggagcggagcggc 90
          |||||||||||||||||||
Sbjct: 60 cggagcggagcggagcggc 42
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>emb|AL844600.3| Mouse DNA sequence from clone RP24-92D2 on chromosome 4, complete
              sequence
          Length = 149318

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 93     ctcctccctcccccctgcc 111
              |||||||||||||||||||
Sbjct: 123786 ctcctccctcccccctgcc 123768
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>ref|NM_205288.1| Gallus gallus integrin, alpha 8 (ITGA8), mRNA
          Length = 3529

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 72 cggagcggagcggagcggc 90
          |||||||||||||||||||
Sbjct: 88 cggagcggagcggagcggc 70
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>ref|NM_205509.1| Gallus gallus fibroblast growth factor receptor 3 (achondroplasia,
           thanatophoric dwarfism) (FGFR3), mRNA
          Length = 3694

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 72  cggagcggagcggagcggc 90
           |||||||||||||||||||
Sbjct: 228 cggagcggagcggagcggc 246
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>gb|AC148484.17| Medicago truncatula clone mth2-46g10, complete sequence
          Length = 130381

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 147    gcatggatttgccaatggt 165
              |||||||||||||||||||
Sbjct: 113252 gcatggatttgccaatggt 113234
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>gb|AC012676.5| Homo sapiens chromosome 16 clone RP11-295D4, complete sequence
          Length = 172071

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 83    ggagcggcagctcctccct 101
             |||||||||||||||||||
Sbjct: 80882 ggagcggcagctcctccct 80864
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>gb|AC005089.3| Homo sapiens BAC clone CTA-315H11 from 7, complete sequence
          Length = 177893

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 81     gcggagcggcagctcctcc 99
              |||||||||||||||||||
Sbjct: 123551 gcggagcggcagctcctcc 123569
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>gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genomic sequence, complete
             sequence
          Length = 135585

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 71    tcggagcggagcggagcgg 89
             |||||||||||||||||||
Sbjct: 33409 tcggagcggagcggagcgg 33391
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>gb|AE002098.2| Neisseria meningitidis MC58, complete genome
          Length = 2272360

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 89     gcagctcctccctcccccc 107
              |||||||||||||||||||
Sbjct: 647531 gcagctcctccctcccccc 647513
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 93       ctcctccctcccccctgcc 111
                |||||||||||||||||||
Sbjct: 23798263 ctcctccctcccccctgcc 23798245
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 114      ggcggtcaccgactgatgcataa 136
                |||||||||| ||||||||||||
Sbjct: 18807449 ggcggtcacccactgatgcataa 18807471
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 72       cggagcggagcggagcggcagct 94
                ||||| |||||||||||||||||
Sbjct: 26659075 cggaggggagcggagcggcagct 26659097
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 71       tcggagcggagcggagcgg 89
                |||||||||||||||||||
Sbjct: 16229026 tcggagcggagcggagcgg 16229008
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                           
Query: 96       ctccctccccc-ctgccgcggcggtca 121
                ||||||||||| |||||||||||||||
Sbjct: 39720610 ctccctccccctctgccgcggcggtca 39720584
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>gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone
             BACR08I14, complete sequence
          Length = 190616

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    cagctcctccctcccccct 108
             |||||||||||||||||||
Sbjct: 13340 cagctcctccctcccccct 13358
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>gb|AC023830.9| Homo sapiens chromosome 16 clone RP11-709D24, complete sequence
          Length = 182662

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 88     ggcagctcctccctccccc 106
              |||||||||||||||||||
Sbjct: 165646 ggcagctcctccctccccc 165628
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>emb|BX930592.1| Gallus gallus finished cDNA, clone ChEST969m22
          Length = 791

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 72 cggagcggagcggagcggc 90
          |||||||||||||||||||
Sbjct: 10 cggagcggagcggagcggc 28
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>ref|NM_001039321.1| Gallus gallus similar to hyperpolarization-activated, cyclic
          nucleotide-gated K+ 4; hyperpolarization-activated,
          cyclic nucleotide-gated potassium channel 4 (HCN4);
          hyperpolarization-activated cyclic nucleotide-gated
          potassium channel 4 (HCN4) (LOC428335), mRNA
          Length = 2709

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 72 cggagcggagcggagcggc 90
          |||||||||||||||||||
Sbjct: 60 cggagcggagcggagcggc 42
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>gb|AC027601.25| Homo sapiens chromosome 17, clone RP11-455O6, complete sequence
          Length = 192732

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 93     ctcctccctcccccctgcc 111
              |||||||||||||||||||
Sbjct: 181561 ctcctccctcccccctgcc 181579
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>gb|AC091712.3| Rattus norvegicus strain Brown Norway clone RP31-64M17, complete
            sequence
          Length = 157848

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 90   cagctcctccctcccccct 108
            |||||||||||||||||||
Sbjct: 4568 cagctcctccctcccccct 4586
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>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0470A12
          Length = 185095

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                        
Query: 96    ctccctccccc-ctgccgcggcggtca 121
             ||||||||||| |||||||||||||||
Sbjct: 71509 ctccctccccctctgccgcggcggtca 71483
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>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0092C08
          Length = 131049

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    ctcctccctcccccctgcc 111
             |||||||||||||||||||
Sbjct: 87463 ctcctccctcccccctgcc 87445
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>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1047G05
          Length = 145431

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 72    cggagcggagcggagcggcagct 94
             ||||| |||||||||||||||||
Sbjct: 16538 cggaggggagcggagcggcagct 16560
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>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0677B10
          Length = 134423

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 72    cggagcggagcggagcggcagct 94
             ||||| |||||||||||||||||
Sbjct: 75505 cggaggggagcggagcggcagct 75527
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>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0055I24
          Length = 155872

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 114    ggcggtcaccgactgatgcataa 136
              |||||||||| ||||||||||||
Sbjct: 139737 ggcggtcacccactgatgcataa 139759
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>emb|X70342.1|GGNCAMA G.gallus NCAM gene
          Length = 4979

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   cggagcggagcggagcggc 90
            |||||||||||||||||||
Sbjct: 2199 cggagcggagcggagcggc 2217
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>dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1112_F06
          Length = 104419

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 114  ggcggtcaccgactgatgcataa 136
            |||||||||| ||||||||||||
Sbjct: 7635 ggcggtcacccactgatgcataa 7657
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>gb|AC099736.10| Mus musculus chromosome 15, clone RP23-228F5, complete sequence
          Length = 186137

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 142  actgtgcatggatttgcca 160
            |||||||||||||||||||
Sbjct: 6565 actgtgcatggatttgcca 6583
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>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete
              sequence
          Length = 343833

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 90     cagctcctccctcccccct 108
              |||||||||||||||||||
Sbjct: 165644 cagctcctccctcccccct 165662
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>gb|U95088.1|GGU95088 Gallus gallus progesterone receptor binding protein (rbf) gene,
            complete cds
          Length = 3944

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 167  ctagtgatggcactgccaa 185
            |||||||||||||||||||
Sbjct: 2582 ctagtgatggcactgccaa 2564
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>gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromosome ul, complete
             sequence
          Length = 179661

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 72    cggagcggagcggagcggc 90
             |||||||||||||||||||
Sbjct: 75494 cggagcggagcggagcggc 75512
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>gb|AC171010.3| Gallus gallus BAC clone CH261-161I5 from chromosome ul, complete
             sequence
          Length = 245010

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 72    cggagcggagcggagcggc 90
             |||||||||||||||||||
Sbjct: 53840 cggagcggagcggagcggc 53858
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>gb|AC132138.2| Mus musculus BAC clone RP23-178E7 from 8, complete sequence
          Length = 204856

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 67     gggatcggagcggagcggagcgg 89
              |||| ||||||||||||||||||
Sbjct: 190937 gggagcggagcggagcggagcgg 190915
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>emb|BX927192.15| Zebrafish DNA sequence from clone DKEY-56M20 in linkage group 5,
             complete sequence
          Length = 152997

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    cggagcggagcggagcggc 90
             |||||||||||||||||||
Sbjct: 75430 cggagcggagcggagcggc 75412
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>gb|M15860.1|CHKNCAM01 Chicken neural cell-adhesion molecule (N-CAM) gene, exon 1
          Length = 266

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 72  cggagcggagcggagcggc 90
           |||||||||||||||||||
Sbjct: 83  cggagcggagcggagcggc 101
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>gb|M35195.1|CHKCEK2 Chicken tyrosine kinase (cek2) mRNA, complete cds
          Length = 3694

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 72  cggagcggagcggagcggc 90
           |||||||||||||||||||
Sbjct: 228 cggagcggagcggagcggc 246


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,443,240
Number of Sequences: 3902068
Number of extensions: 1443240
Number of successful extensions: 118708
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 118041
Number of HSP's gapped (non-prelim): 628
length of query: 200
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 178
effective length of database: 17,147,199,772
effective search space: 3052201559416
effective search space used: 3052201559416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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