Clone Name | bastl23f11 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_363889.1| Magnaporthe grisea 70-15 hypothetical protein (MG01815.4) partial mRNA Length = 2766 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 cacctcctttaccagcttt 32 ||||||||||||||||||| Sbjct: 292 cacctcctttaccagcttt 310
>gb|AC008975.3| Homo sapiens chromosome 19 clone LLNL-F_138H2, complete sequence Length = 39577 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 cacctgaccacccacctcc 20 ||||||||||||||||||| Sbjct: 22988 cacctgaccacccacctcc 22970
>emb|BX088566.6| Zebrafish DNA sequence from clone DKEY-63E5 in linkage group 6, complete sequence Length = 195778 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 ctgaccacccacctccttt 23 ||||||||||||||||||| Sbjct: 63392 ctgaccacccacctccttt 63374
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 cctttaccagctttgccg 36 |||||||||||||||||| Sbjct: 444178 cctttaccagctttgccg 444195
>gb|AC122922.4| Mus musculus BAC clone RP23-34M5 from chromosome 1, complete sequence Length = 223959 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 gaccacccacctccttta 24 |||||||||||||||||| Sbjct: 102768 gaccacccacctccttta 102751
>emb|CR956360.10| Pig DNA sequence from clone CH242-245E12 on chromosome 7, complete sequence Length = 185507 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 cctgaccacccacctcct 21 |||||||||||||||||| Sbjct: 140731 cctgaccacccacctcct 140748
>emb|AL591398.2| Human DNA sequence from clone RP11-81C12 on chromosome X Contains a pseudogene similar to part of mothers against decapentaplegic (MAD) homolog (Drosophila) interacting protein receptor activation anchor (MADHIP), complete sequence Length = 89973 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 accacccacctcctttac 25 |||||||||||||||||| Sbjct: 45930 accacccacctcctttac 45947
>emb|AL590648.9| Human DNA sequence from clone RP11-338C15 on chromosome 1 Contains the 3' end of the ATF3 gene for activating transcription factor 3, three novel genes (FLJ32796) (FLJ40118) and a riboflavin kinase pseudogene, complete sequence Length = 65096 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 acctgaccacccacctcc 20 |||||||||||||||||| Sbjct: 43711 acctgaccacccacctcc 43694
>gb|AC103890.1| 16q24.3 clone, complete sequence Length = 129848 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 cctgaccacccacctcct 21 |||||||||||||||||| Sbjct: 72120 cctgaccacccacctcct 72103
>gb|U53466.2|U53466 Cydia pomonella granulovirus, complete genome Length = 123500 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 ccacctgaccacccacct 18 |||||||||||||||||| Sbjct: 113714 ccacctgaccacccacct 113731
>gb|AC137932.1| Homo sapiens chromosome 16 clone GS2-740I5, complete sequence Length = 129785 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 cctgaccacccacctcct 21 |||||||||||||||||| Sbjct: 57784 cctgaccacccacctcct 57801
>emb|BX004839.9| Zebrafish DNA sequence from clone DKEY-18A23 in linkage group 6, complete sequence Length = 223000 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ctgaccacccacctcctt 22 |||||||||||||||||| Sbjct: 173926 ctgaccacccacctcctt 173909
>gb|AC153522.4| Mus musculus 10 BAC RP23-8O1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 238562 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 acctgaccacccacctcc 20 |||||||||||||||||| Sbjct: 40044 acctgaccacccacctcc 40061
>emb|AL451077.9| Human DNA sequence from clone RP11-305A3 on chromosome 1, complete sequence Length = 173609 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 acctgaccacccacctcc 20 |||||||||||||||||| Sbjct: 170976 acctgaccacccacctcc 170993
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 acctgaccacccacctcc 20 |||||||||||||||||| Sbjct: 1621281 acctgaccacccacctcc 1621264
>gb|AC131789.4| Mus musculus BAC clone RP24-444D19 from 10, complete sequence Length = 178210 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 acctgaccacccacctcc 20 |||||||||||||||||| Sbjct: 44693 acctgaccacccacctcc 44676 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 343,086 Number of Sequences: 3902068 Number of extensions: 343086 Number of successful extensions: 74284 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74223 Number of HSP's gapped (non-prelim): 61 length of query: 39 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 19 effective length of database: 17,155,003,908 effective search space: 325945074252 effective search space used: 325945074252 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)