>Y1163_HAEIN (Q57252) Protein HI1163|
          Length = 1027

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 146 QPGGSSLHSPGFLLQPPDLARSTAICFRRAAARGWPLAAVDP 271
           +P G ++H  GFL +    A++ A    R A  G PL  VDP
Sbjct: 826 KPNGKAMHIKGFLKRFSKTAQNQAEFLNRMAKLGIPLVGVDP 867

>YDIJ_ECOLI (P77748) Hypothetical protein ydiJ|
          Length = 1018

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +2

Query: 149 PGGSSLHSPGFLLQPPDLARSTAICFRRAAARGWPLAAVDP 271
           P G + H  GFL +    A+ TA    R A  G P+  VDP
Sbjct: 826 PNGKAQHIKGFLNRFAKTAKKTADFLNRMAKLGMPMVGVDP 866

>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 51)
           (Ubiquitin-specific-processing protease 51)
           (Deubiquitinating enzyme 51)
          Length = 711

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +2

Query: 128 KP*PRPQPGGSSLHSPGFLLQPPDLAR 208
           KP PRPQP   S   PG    PP  AR
Sbjct: 103 KPRPRPQPRARSRSQPGLSAPPPPPAR 129

>QUEA_RHOS4 (Q3J252) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC|
           5.-.-.-) (Queuosine biosynthesis protein queA)
          Length = 346

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
 Frame = -1

Query: 285 VPADLGSTAARGHPLAAARRKQMAVERARSGGWRR--------KPGE 169
           +PA L  T  RG   A AR +   +E A +GGWR         KPGE
Sbjct: 62  IPARLTGTRTRGE--AEARVEVTLMEPAAAGGWRAMAKPLRKLKPGE 106

>LSB6_YEAST (P42951) Phosphatidylinositol 4-kinase LSB6 (EC 2.7.1.67)|
           (PI4-kinase) (PtdIns-4-kinase)
          Length = 607

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 231 RRKQMAVERARSGGWRRKPGEWRLDPPGW 145
           R K  A++   S  W+  P EWRL P GW
Sbjct: 406 RLKLAAIDNGLSFPWKH-PDEWRLYPYGW 433

>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +2

Query: 152 GGSSLHSPGFLLQPPDLARSTAICFRRAAARGWPLAAVD 268
           GG SLH P F L       ++A C   A ARG P    D
Sbjct: 41  GGFSLHPPYFNLAEGARIAASATCGEEAPARGSPRPTED 79


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,242,034
Number of Sequences: 219361
Number of extensions: 413340
Number of successful extensions: 1529
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)