>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA
           sequence
          Length = 2863

 Score =  186 bits (94), Expect = 1e-44
 Identities = 112/118 (94%)
 Strand = Plus / Plus

                                                                       
Query: 20  ccgcgatttcctccccggcgccccgccgattccctgtcgatcgagctgccgcggtgcctt 79
           |||||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||||
Sbjct: 1   ccgcgatttcctcctcggccgcccgccgattccctgtcgatcgagctgtcgcggtgcctt 60

                                                                     
Query: 80  ggtcgggttcgggaccctcagccatgacgacagaccagccagtgatcagcctgcgccc 137
           |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggtcggattcggcaccctcagccatgacgacagaccagccagtgatcagcctgcgccc 118

>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit
           mRNA, complete cds
          Length = 2887

 Score =  186 bits (94), Expect = 1e-44
 Identities = 112/118 (94%)
 Strand = Plus / Plus

                                                                       
Query: 20  ccgcgatttcctccccggcgccccgccgattccctgtcgatcgagctgccgcggtgcctt 79
           |||||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||||
Sbjct: 1   ccgcgatttcctcctcggccgcccgccgattccctgtcgatcgagctgtcgcggtgcctt 60

                                                                     
Query: 80  ggtcgggttcgggaccctcagccatgacgacagaccagccagtgatcagcctgcgccc 137
           |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggtcggattcggcaccctcagccatgacgacagaccagccagtgatcagcctgcgccc 118

>gb|AF029308.1|HTCRBCHR9 Homo sapiens chromosome 9 duplication of the T cell receptor beta locus
             and trypsinogen gene families
          Length = 216293

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aaaaagctcggattcctccg 22
             ||||||||||||||||||||
Sbjct: 23374 aaaaagctcggattcctccg 23393

>gb|AC103849.3| Homo sapiens chromosome 8, clone RP11-75H14, complete sequence
          Length = 147107

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gacagaccagccagtgatca 127
             ||||||||||||||||||||
Sbjct: 15395 gacagaccagccagtgatca 15376

>emb|AL139008.10| Human DNA sequence from clone RP11-255A11 on chromosome 9 Contains four
              novel genes, the gene for a novel protein similar to
              suppressor of G2 allele of SKP1 homolog, the gene for a
              novel protein similar to KIAA1074, a melanoma antigen
              pseudogene, a sorting nexin 18 (SNX18) pseudogene, a
              trypsin domain pseudogene, two genes for novel
              immunoglobulin domain containing proteins, the gene for a
              novel protein similar to annexin A2 (ANXA2), the gene for a
              novel protein similar to T-cell receptor beta chain V
              region proteins, a T-cell receptor beta chain V region
              protein LB2 pseudogene and two CpG islands, complete
              sequence
          Length = 159974

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      aaaaagctcggattcctccg 22
              ||||||||||||||||||||
Sbjct: 134636 aaaaagctcggattcctccg 134655

>gb|AC107952.5| Homo sapiens chromosome 8, clone RP11-140I16, complete sequence
          Length = 142102

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    gacagaccagccagtgatca 127
              ||||||||||||||||||||
Sbjct: 106152 gacagaccagccagtgatca 106133

>ref|NG_001337.1| Homo sapiens T cell receptor beta variable orphans on chromosome 9
             (TRBVOR9@) on chromosome 9
          Length = 194564

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aaaaagctcggattcctccg 22
             ||||||||||||||||||||
Sbjct: 23362 aaaaagctcggattcctccg 23381

>gb|AF099926.3| Caenorhabditis elegans cosmid T06A10, complete sequence
          Length = 41278

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 56   tcgatcgagctgccgcggt 74
            |||||||||||||||||||
Sbjct: 8429 tcgatcgagctgccgcggt 8447

>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12,
              complete sequence
          Length = 155402

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 15     ttcctccgcgatttcctcc 33
              |||||||||||||||||||
Sbjct: 119475 ttcctccgcgatttcctcc 119457

>ref|NM_070597.2| Caenorhabditis elegans Maternal Effect Lethal family member
          (mel-46) (mel-46) mRNA, complete cds
          Length = 2959

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 56 tcgatcgagctgccgcggt 74
          |||||||||||||||||||
Sbjct: 50 tcgatcgagctgccgcggt 32

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 15       ttcctccgcgatttcctcc 33
                |||||||||||||||||||
Sbjct: 20966115 ttcctccgcgatttcctcc 20966097

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 15       ttcctccgcgatttcctcc 33
                |||||||||||||||||||
Sbjct: 21728299 ttcctccgcgatttcctcc 21728281

>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1274F11
          Length = 171257

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    ttcctccgcgatttcctcc 33
             |||||||||||||||||||
Sbjct: 58204 ttcctccgcgatttcctcc 58186

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 112    gaccagccagtgatcagcc 130
              |||||||||||||||||||
Sbjct: 578741 gaccagccagtgatcagcc 578759


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 596,430
Number of Sequences: 3902068
Number of extensions: 596430
Number of successful extensions: 39293
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39187
Number of HSP's gapped (non-prelim): 106
length of query: 161
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 139
effective length of database: 17,147,199,772
effective search space: 2383460768308
effective search space used: 2383460768308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)