Clone Name | bastl23f03 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK129661.1| Homo sapiens cDNA FLJ26150 fis, clone ADG00494 Length = 1815 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Plus Query: 33 ttcaaaacaaacttcgccaaacttc 57 |||||||||||||| |||||||||| Sbjct: 974 ttcaaaacaaacttggccaaacttc 998
>emb|AL163193.5|HS73E6 Homo sapiens chromosome 9 BAC RP11-73E6, complete sequence Length = 175931 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 ttcaaaacaaacttcgccaaacttc 57 |||||||||||||| |||||||||| Sbjct: 83866 ttcaaaacaaacttggccaaacttc 83842
>gb|AC132144.3| Mus musculus BAC clone RP23-39L19 from chromosome 2, complete sequence Length = 233042 Score = 40.1 bits (20), Expect = 0.69 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 catcatgtactttctgctct 20 |||||||||||||||||||| Sbjct: 84897 catcatgtactttctgctct 84878
>emb|AL445489.10| Human DNA sequence from clone RP11-230L22 on chromosome 9 Contains the 3' end of a gene for a novel delta-notch like protein (FLJ38464), the 5' end of the gene for a novel protein (KIAA1608), a novel gene and two CpG islands, complete sequence Length = 175869 Score = 40.1 bits (20), Expect = 0.69 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 catcatgtactttctgctct 20 |||||||||||||||||||| Sbjct: 147358 catcatgtactttctgctct 147377
>gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, complete sequence Length = 173808 Score = 40.1 bits (20), Expect = 0.69 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 atctctgtcttcaaaacaaa 43 |||||||||||||||||||| Sbjct: 121738 atctctgtcttcaaaacaaa 121757
>emb|AL805959.11| Mouse DNA sequence from clone RP23-391H10 on chromosome 2, complete sequence Length = 217595 Score = 40.1 bits (20), Expect = 0.69 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 catcatgtactttctgctct 20 |||||||||||||||||||| Sbjct: 198739 catcatgtactttctgctct 198758
>gb|DQ213530.1| Taeniopygia guttata clone 0058P0012H02 nuclear receptor subfamily 2 group F member 2-like mRNA, complete sequence Length = 1369 Score = 38.2 bits (19), Expect = 2.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 gccaaacttcctcttcccccttt 70 |||||||||||| |||||||||| Sbjct: 90 gccaaacttcctgttcccccttt 68
>gb|AC165329.8| Mus musculus chromosome 3, clone wi1-298L18, complete sequence Length = 40686 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 ctctgtcttcaaaacaaac 44 ||||||||||||||||||| Sbjct: 27441 ctctgtcttcaaaacaaac 27423
>ref|XM_612041.2| PREDICTED: Bos taurus similar to delta/notch-like EGF-related receptor (LOC540552), mRNA Length = 1667 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 tcatgtactttctgctctc 21 ||||||||||||||||||| Sbjct: 960 tcatgtactttctgctctc 978
>gb|AC136455.3| Mus musculus BAC clone RP24-481H2 from chromosome 6, complete sequence Length = 166458 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 catcatgtactttctgctc 19 ||||||||||||||||||| Sbjct: 1209 catcatgtactttctgctc 1191
>gb|AC079855.8| Homo sapiens BAC clone RP11-332L16 from 7, complete sequence Length = 143146 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 ctctgtcttcaaaacaaac 44 ||||||||||||||||||| Sbjct: 117983 ctctgtcttcaaaacaaac 118001
>emb|CT009769.4| Mouse DNA sequence from clone RP23-44C21 on chromosome 9, complete sequence Length = 197074 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 caaacttcctcttccccct 68 ||||||||||||||||||| Sbjct: 67771 caaacttcctcttccccct 67753
>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete sequence Length = 205684 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 caaaacaaacttcgccaaa 53 ||||||||||||||||||| Sbjct: 29773 caaaacaaacttcgccaaa 29791
>gb|AC118224.8| Mus musculus chromosome 10, clone RP23-341N20, complete sequence Length = 205533 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 tctgtcttcaaaacaaact 45 ||||||||||||||||||| Sbjct: 6358 tctgtcttcaaaacaaact 6376
>gb|AC153539.7| Mus musculus 10 BAC RP23-245C19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230854 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 tctgtcttcaaaacaaact 45 ||||||||||||||||||| Sbjct: 36350 tctgtcttcaaaacaaact 36332
>gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214029 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 catcatgtactttctgctc 19 ||||||||||||||||||| Sbjct: 129294 catcatgtactttctgctc 129276
>gb|AC017099.11| Homo sapiens BAC clone RP11-542D13 from 2, complete sequence Length = 230426 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 tctctgtcttcaaaacaaa 43 ||||||||||||||||||| Sbjct: 95841 tctctgtcttcaaaacaaa 95859
>gb|AC013272.5| Homo sapiens BAC clone RP11-401C13 from 2, complete sequence Length = 172705 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 tctctgtcttcaaaacaaa 43 ||||||||||||||||||| Sbjct: 115528 tctctgtcttcaaaacaaa 115510
>gb|AC018892.8| Homo sapiens BAC clone RP11-499E14 from 2, complete sequence Length = 191055 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 tctctgtcttcaaaacaaa 43 ||||||||||||||||||| Sbjct: 92701 tctctgtcttcaaaacaaa 92683
>gb|AC160020.1| Homo sapiens BAC clone RP11-540L21 from 2, complete sequence Length = 202084 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 tctctgtcttcaaaacaaa 43 ||||||||||||||||||| Sbjct: 36177 tctctgtcttcaaaacaaa 36159
>gb|AC148026.2| Homo sapiens BAC clone RP11-625I24 from 2, complete sequence Length = 159856 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 tctctgtcttcaaaacaaa 43 ||||||||||||||||||| Sbjct: 63182 tctctgtcttcaaaacaaa 63164
>gb|AC162806.4| Mus musculus BAC clone RP23-95E13 from chromosome 9, complete sequence Length = 165949 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 ctgtcttcaaaacaaactt 46 ||||||||||||||||||| Sbjct: 18781 ctgtcttcaaaacaaactt 18799
>gb|AC140363.3| Mus musculus BAC clone RP23-212M11 from 9, complete sequence Length = 217832 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 ctgtcttcaaaacaaactt 46 ||||||||||||||||||| Sbjct: 41812 ctgtcttcaaaacaaactt 41794
>gb|AC157571.6| Mus musculus BAC clone RP23-111F7 from chromosome 12, complete sequence Length = 208117 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 caaaacaaacttcgccaaa 53 ||||||||||||||||||| Sbjct: 197051 caaaacaaacttcgccaaa 197069
>emb|AL365326.14| Mouse DNA sequence from clone RP23-381K21 on chromosome 1, complete sequence Length = 189860 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 tctgtcttcaaaacaaact 45 ||||||||||||||||||| Sbjct: 75809 tctgtcttcaaaacaaact 75791 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 893,939 Number of Sequences: 3902068 Number of extensions: 893939 Number of successful extensions: 65681 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65627 Number of HSP's gapped (non-prelim): 54 length of query: 70 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 49 effective length of database: 17,151,101,840 effective search space: 840403990160 effective search space used: 840403990160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)