ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl23f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469973.1| Oryza sativa (japonica cultivar-group), mRNA 159 4e-36
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 159 4e-36
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 159 4e-36
4gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genom... 159 4e-36
5gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genom... 159 4e-36
6dbj|AK099884.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 4e-36
7dbj|AK069591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 4e-36
8gb|BT024078.1| Zea mays clone EL01N0521E04 mRNA sequence 135 6e-29
9gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 44 0.18
10gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 44 0.18
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.18
12gb|AF218569.1|AF218569 Streptomyces clavuligerus NAD-glutamate d... 44 0.18
13gb|AF096871.1|AF096871 Zea mays calcium ATPase (cap1) mRNA, comp... 44 0.18
14dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.18
15gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.71
16gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.71
17ref|NM_164671.1| Drosophila melanogaster little imaginal discs C... 42 0.71
18gb|AY095051.1| Drosophila melanogaster LD40310 full insert cDNA 42 0.71
19ref|NM_078762.4| Drosophila melanogaster little imaginal discs C... 42 0.71
20gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, c... 42 0.71
21gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, r... 42 0.71
22dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.71
23dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.71
24dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.71
25gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) ch... 42 0.71
26dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 0.71
27ref|XM_574564.1| PREDICTED: Rattus norvegicus similar to CDNA se... 42 0.71
28dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.71
29dbj|AK071382.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.71
30gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21... 42 0.71
31gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 0.71
32gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.71
33gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.71
34gb|AC004758.1|AC004758 Drosophila melanogaster DNA sequence (P1s... 42 0.71
35ref|NM_187866.1| Oryza sativa (japonica cultivar-group), Ozsa831... 40 2.8
36ref|XM_474362.1| Oryza sativa (japonica cultivar-group), predic... 40 2.8
37ref|XM_466020.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.8
38ref|XM_477102.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.8
39ref|XM_506221.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 2.8
40gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.8
41emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 2.8
42emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 40 2.8
43emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4,... 40 2.8
44emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4,... 40 2.8
45emb|AJ496192.1|SLI496192 Streptomyces lividans spC gene for seri... 40 2.8
46gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 gen... 40 2.8
47dbj|AK092260.1| Homo sapiens cDNA FLJ34941 fis, clone NT2RP7007480 40 2.8
48ref|NR_002834.1| Homo sapiens dual specificity phosphatase 5 pse... 40 2.8
49tpg|BK000357.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M77 t... 40 2.8
50gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 2.8
51dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
52dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
53dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
54dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
55gb|AY228175.1|AY228174S2 Streptomyces murayamaensis putative ary... 40 2.8
56gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E... 40 2.8
57gb|AE004905.1| Pseudomonas aeruginosa PAO1, section 466 of 529 o... 40 2.8
58gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 2.8
59dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
60dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
61dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
62dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
63dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
64dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
65dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
66dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
67dbj|AK099319.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.8
68dbj|AK059852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.8
69dbj|AK059111.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.8
70emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 2.8 
>ref|XM_469973.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2851

 Score =  159 bits (80), Expect = 4e-36
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                       
Query: 113 cacggcggccgccaggatgctgcccgacggcggcggtgacgacgaggagcgctggctcgc 172
           ||||||||| | |||||||||||| || |||||||  |||||||||||||| ||||||||
Sbjct: 32  cacggcggcggtcaggatgctgccggatggcggcgccgacgacgaggagcggtggctcgc 91

                                                           
Query: 173 cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 220
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 139
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  159 bits (80), Expect = 4e-36
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                            
Query: 113      cacggcggccgccaggatgctgcccgacggcggcggtgacgacgaggagcgctggctcgc 172
                ||||||||| | |||||||||||| || |||||||  |||||||||||||| ||||||||
Sbjct: 33121179 cacggcggcggtcaggatgctgccggatggcggcgccgacgacgaggagcggtggctcgc 33121238

                                                                
Query: 173      cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 220
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33121239 cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 33121286



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 170      cgccgagggcatcgccggcg 189
                ||||||||||||||||||||
Sbjct: 27022989 cgccgagggcatcgccggcg 27022970
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  159 bits (80), Expect = 4e-36
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                            
Query: 113      cacggcggccgccaggatgctgcccgacggcggcggtgacgacgaggagcgctggctcgc 172
                ||||||||| | |||||||||||| || |||||||  |||||||||||||| ||||||||
Sbjct: 33211689 cacggcggcggtcaggatgctgccggatggcggcgccgacgacgaggagcggtggctcgc 33211748

                                                                
Query: 173      cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 220
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33211749 cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 33211796



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 170      cgccgagggcatcgccggcg 189
                ||||||||||||||||||||
Sbjct: 27114312 cgccgagggcatcgccggcg 27114293
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>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete
              sequence
          Length = 144487

 Score =  159 bits (80), Expect = 4e-36
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                          
Query: 113    cacggcggccgccaggatgctgcccgacggcggcggtgacgacgaggagcgctggctcgc 172
              ||||||||| | |||||||||||| || |||||||  |||||||||||||| ||||||||
Sbjct: 123376 cacggcggcggtcaggatgctgccggatggcggcgccgacgacgaggagcggtggctcgc 123317

                                                              
Query: 173    cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 220
              ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123316 cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 123269
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>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence,
            complete sequence
          Length = 139823

 Score =  159 bits (80), Expect = 4e-36
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                        
Query: 113  cacggcggccgccaggatgctgcccgacggcggcggtgacgacgaggagcgctggctcgc 172
            ||||||||| | |||||||||||| || |||||||  |||||||||||||| ||||||||
Sbjct: 2129 cacggcggcggtcaggatgctgccggatggcggcgccgacgacgaggagcggtggctcgc 2070

                                                            
Query: 173  cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 220
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2069 cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 2022
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>dbj|AK099884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111P21, full
           insert sequence
          Length = 2931

 Score =  159 bits (80), Expect = 4e-36
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                       
Query: 113 cacggcggccgccaggatgctgcccgacggcggcggtgacgacgaggagcgctggctcgc 172
           ||||||||| | |||||||||||| || |||||||  |||||||||||||| ||||||||
Sbjct: 124 cacggcggcggtcaggatgctgccggatggcggcgccgacgacgaggagcggtggctcgc 183

                                                           
Query: 173 cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 220
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 231
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>dbj|AK069591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023M08, full
           insert sequence
          Length = 3011

 Score =  159 bits (80), Expect = 4e-36
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                       
Query: 113 cacggcggccgccaggatgctgcccgacggcggcggtgacgacgaggagcgctggctcgc 172
           ||||||||| | |||||||||||| || |||||||  |||||||||||||| ||||||||
Sbjct: 192 cacggcggcggtcaggatgctgccggatggcggcgccgacgacgaggagcggtggctcgc 251

                                                           
Query: 173 cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 220
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgc 299
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>gb|BT024078.1| Zea mays clone EL01N0521E04 mRNA sequence
          Length = 2855

 Score =  135 bits (68), Expect = 6e-29
 Identities = 83/88 (94%)
 Strand = Plus / Plus

                                                                       
Query: 130 tgctgcccgacggcggcggtgacgacgaggagcgctggctcgccgagggcatcgccggcg 189
           |||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tgctccccgacggcggtgctgacgacgaggagcgctggctcgccgagggcatcgccggcg 173

                                       
Query: 190 tccagcagaacgccttctacatgcaccg 217
           ||||||| ||||| ||||||||||||||
Sbjct: 174 tccagcaaaacgctttctacatgcaccg 201
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 167     gctcgccgagggcatcgccggc 188
               ||||||||||||||||||||||
Sbjct: 3029836 gctcgccgagggcatcgccggc 3029857
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 39      cacgcgcgacgagatccccaac 60
               ||||||||||||||||||||||
Sbjct: 1436418 cacgcgcgacgagatccccaac 1436439
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 140      cggcggcggtgacgacgaggag 161
                ||||||||||||||||||||||
Sbjct: 14294283 cggcggcggtgacgacgaggag 14294262
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>gb|AF218569.1|AF218569 Streptomyces clavuligerus NAD-glutamate dehydrogenase (gdh) gene,
            complete cds
          Length = 5958

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 164  ctggctcgccgagggcatcgcc 185
            ||||||||||||||||||||||
Sbjct: 3309 ctggctcgccgagggcatcgcc 3330
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>gb|AF096871.1|AF096871 Zea mays calcium ATPase (cap1) mRNA, complete cds
          Length = 3310

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 135 cccgacggcggcggtgacgacgagga 160
           ||||||||||||| ||||||||||||
Sbjct: 270 cccgacggcggcgttgacgacgagga 245
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>dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1261_A08
          Length = 162113

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 140    cggcggcggtgacgacgaggag 161
              ||||||||||||||||||||||
Sbjct: 110828 cggcggcggtgacgacgaggag 110807
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>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0017H17, complete sequence
          Length = 156331

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 137   cgacggcggcggtgacgacgaggag 161
             |||||||||||| ||||||||||||
Sbjct: 92132 cgacggcggcggcgacgacgaggag 92156
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>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17,
             complete sequence
          Length = 141041

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 137   cgacggcggcggtgacgacgaggag 161
             |||||||||||| ||||||||||||
Sbjct: 24298 cgacggcggcggcgacgacgaggag 24274
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>ref|NM_164671.1| Drosophila melanogaster little imaginal discs CG9088-RB, transcript
           variant B (lid), mRNA
          Length = 5831

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 102 gaggcggacaacacggcggccgcca 126
           ||||||||||||||| |||||||||
Sbjct: 129 gaggcggacaacacgacggccgcca 153
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>gb|AY095051.1| Drosophila melanogaster LD40310 full insert cDNA
          Length = 5965

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 102 gaggcggacaacacggcggccgcca 126
           ||||||||||||||| |||||||||
Sbjct: 243 gaggcggacaacacgacggccgcca 267
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>ref|NM_078762.4| Drosophila melanogaster little imaginal discs CG9088-RA, transcript
           variant A (lid), mRNA
          Length = 5945

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 102 gaggcggacaacacggcggccgcca 126
           ||||||||||||||| |||||||||
Sbjct: 243 gaggcggacaacacgacggccgcca 267
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>gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, complete sequence
          Length = 166757

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 136   ccgacggcggcggtgacgacg 156
             |||||||||||||||||||||
Sbjct: 58196 ccgacggcggcggtgacgacg 58216
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>gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, region 25F-26A, BAC clone
              BACR10M11, complete sequence
          Length = 174832

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 102    gaggcggacaacacggcggccgcca 126
              ||||||||||||||| |||||||||
Sbjct: 153942 gaggcggacaacacgacggccgcca 153966
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 137      cgacggcggcggtgacgacgaggag 161
                |||||||||||| ||||||||||||
Sbjct: 21881289 cgacggcggcggcgacgacgaggag 21881313



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 140     cggcggcggtgacgacgagg 159
               ||||||||||||||||||||
Sbjct: 4807612 cggcggcggtgacgacgagg 4807593
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 137      cgacggcggcggtgacgacgaggag 161
                |||||||||||| ||||||||||||
Sbjct: 15170599 cgacggcggcggcgacgacgaggag 15170575



 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 136     ccgacggcggcggtgacgacg 156
               |||||||||||||||||||||
Sbjct: 3088564 ccgacggcggcggtgacgacg 3088584



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 141      ggcggcggtgacgacgaggagcgc 164
                ||||||||||||||||| ||||||
Sbjct: 19721010 ggcggcggtgacgacgacgagcgc 19720987
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 137      cgacggcggcggtgacgacgaggag 161
                |||||||||||| ||||||||||||
Sbjct: 17445335 cgacggcggcggcgacgacgaggag 17445359



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 141      ggcggcggtgacgacgaggagcgc 164
                ||||||||||||||||| ||||||
Sbjct: 17028597 ggcggcggtgacgacgacgagcgc 17028574



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 142     gcggcggtgacgacgaggag 161
               ||||||||||||||||||||
Sbjct: 5917617 gcggcggtgacgacgaggag 5917598
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>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11,
             complete sequence
          Length = 129420

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 137   cgacggcggcggtgacgacgaggag 161
             |||||||||||| ||||||||||||
Sbjct: 79212 cgacggcggcggcgacgacgaggag 79188
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 104     ggcggacaacacggcggccgc 124
               |||||||||||||||||||||
Sbjct: 4949204 ggcggacaacacggcggccgc 4949184
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>ref|XM_574564.1| PREDICTED: Rattus norvegicus similar to CDNA sequence BC006909
            (LOC499267), mRNA
          Length = 4893

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 140  cggcggcggtgacgacgagga 160
            |||||||||||||||||||||
Sbjct: 2133 cggcggcggtgacgacgagga 2113
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>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0434A03
          Length = 146505

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 137    cgacggcggcggtgacgacgaggag 161
              |||||||||||| ||||||||||||
Sbjct: 113559 cgacggcggcggcgacgacgaggag 113583
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>dbj|AK071382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091N20, full
           insert sequence
          Length = 4120

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 137 cgacggcggcggtgacgacgaggag 161
           |||||||||||| ||||||||||||
Sbjct: 268 cgacggcggcggcgacgacgaggag 292
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>gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21 of 83 of the complete
             sequence
          Length = 260673

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 102   gaggcggacaacacggcggccgcca 126
             ||||||||||||||| |||||||||
Sbjct: 40137 gaggcggacaacacgacggccgcca 40113
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 200     cgccttctacatgcaccgcgc 220
               |||||||||||||||||||||
Sbjct: 5932357 cgccttctacatgcaccgcgc 5932337
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 137      cgacggcggcggtgacgacgaggag 161
                |||||||||||| ||||||||||||
Sbjct: 15178840 cgacggcggcggcgacgacgaggag 15178816



 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 136     ccgacggcggcggtgacgacg 156
               |||||||||||||||||||||
Sbjct: 3088485 ccgacggcggcggtgacgacg 3088505



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 141      ggcggcggtgacgacgaggagcgc 164
                ||||||||||||||||| ||||||
Sbjct: 19732286 ggcggcggtgacgacgacgagcgc 19732263
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 137      cgacggcggcggtgacgacgaggag 161
                |||||||||||| ||||||||||||
Sbjct: 22191488 cgacggcggcggcgacgacgaggag 22191512



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 140     cggcggcggtgacgacgagg 159
               ||||||||||||||||||||
Sbjct: 4826396 cggcggcggtgacgacgagg 4826377
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>gb|AC004758.1|AC004758 Drosophila melanogaster DNA sequence (P1s DS06106 (D123), DS05973
             (D122), and DS08584 (D118)), complete sequence
          Length = 174311

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 102   gaggcggacaacacggcggccgcca 126
             ||||||||||||||| |||||||||
Sbjct: 93654 gaggcggacaacacgacggccgcca 93678
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>ref|NM_187866.1| Oryza sativa (japonica cultivar-group), Ozsa8310 predicted mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 cgacggcggcggtgacgacg 156
           ||||||||||||||||||||
Sbjct: 286 cgacggcggcggtgacgacg 267
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>ref|XM_474362.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1617

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 135  cccgacggcggcggtgacgacgaggagc 162
            |||||||||| ||||| |||||||||||
Sbjct: 1062 cccgacggcgacggtggcgacgaggagc 1035
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>ref|XM_466020.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 579

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 141 ggcggcggtgacgacgaggagcgc 164
           ||||||||||||||||| ||||||
Sbjct: 508 ggcggcggtgacgacgacgagcgc 531
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>ref|XM_477102.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1570

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 gcggcggtgacgacgaggag 161
           ||||||||||||||||||||
Sbjct: 110 gcggcggtgacgacgaggag 91
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>ref|XM_506221.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_A05.4 mRNA
          Length = 1648

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 gcggcggtgacgacgaggag 161
           ||||||||||||||||||||
Sbjct: 117 gcggcggtgacgacgaggag 98
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>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0096N19, complete sequence
          Length = 178671

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   cggcggcggtgacgacgagg 159
             ||||||||||||||||||||
Sbjct: 24062 cggcggcggtgacgacgagg 24081
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>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    cgacggcggcggtgacgacg 156
              ||||||||||||||||||||
Sbjct: 124775 cgacggcggcggtgacgacg 124794
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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   cgacggcggcggtgacgacg 156
             ||||||||||||||||||||
Sbjct: 22742 cgacggcggcggtgacgacg 22723



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   cgacggcggcggtgacgacg 156
             ||||||||||||||||||||
Sbjct: 22727 cgacggcggcggtgacgacg 22708
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>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02,
             complete sequence
          Length = 172435

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   cgacggcggcggtgacgacg 156
             ||||||||||||||||||||
Sbjct: 56439 cgacggcggcggtgacgacg 56458
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>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
             complete sequence
          Length = 133331

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 135   cccgacggcggcggtgacgacgaggagc 162
             |||||||||| ||||| |||||||||||
Sbjct: 11784 cccgacggcgacggtggcgacgaggagc 11757
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>emb|AJ496192.1|SLI496192 Streptomyces lividans spC gene for serine protease
          Length = 1377

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  cgacggcggcggtgacgacg 156
            ||||||||||||||||||||
Sbjct: 1200 cgacggcggcggtgacgacg 1219
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>gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 genomic sequence, complete
             sequence
          Length = 137366

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   ggcggcggtgacgacgaggagcgc 164
             ||||||||||||||||| ||||||
Sbjct: 56502 ggcggcggtgacgacgacgagcgc 56525
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>dbj|AK092260.1| Homo sapiens cDNA FLJ34941 fis, clone NT2RP7007480
          Length = 2472

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 118 cggccgccaggatgctgccc 137
           ||||||||||||||||||||
Sbjct: 551 cggccgccaggatgctgccc 532
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>ref|NR_002834.1| Homo sapiens dual specificity phosphatase 5 pseudogene (DUSP5P) on
           chromosome 1
          Length = 2472

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 118 cggccgccaggatgctgccc 137
           ||||||||||||||||||||
Sbjct: 551 cggccgccaggatgctgccc 532
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>tpg|BK000357.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M77 transposase gene,
            complete cds
          Length = 13459

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 141  ggcggcggtgacgacgaggagcgc 164
            ||||||||||||||||| ||||||
Sbjct: 5304 ggcggcggtgacgacgacgagcgc 5327
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 129     atgctgcccgacggcggcgg 148
               ||||||||||||||||||||
Sbjct: 1698535 atgctgcccgacggcggcgg 1698516
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 135      cccgacggcggcggtgacgacgaggagc 162
                |||||||||| ||||| |||||||||||
Sbjct: 34706222 cccgacggcgacggtggcgacgaggagc 34706195



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 137      cgacggcggcggtgacgacg 156
                ||||||||||||||||||||
Sbjct: 16527206 cgacggcggcggtgacgacg 16527225
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 141      ggcggcggtgacgacgaggagcgc 164
                ||||||||||||||||| ||||||
Sbjct: 13419433 ggcggcggtgacgacgacgagcgc 13419456
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 141      ggcggcggtgacgacgaggagcgc 164
                ||||||||||||||||| ||||||
Sbjct: 19133549 ggcggcggtgacgacgacgagcgc 19133526
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 137     cgacggcggcggtgacgacg 156
               ||||||||||||||||||||
Sbjct: 8342403 cgacggcggcggtgacgacg 8342422
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>gb|AY228175.1|AY228174S2 Streptomyces murayamaensis putative arylamine N-acetyltransferase,
             putative hydrolase, putative transmembrane efflux protein,
             putative transcriptional regulator, putative ribonuclease
             HII, putative ATP-dependent DNA helicase, putative
             bifunctional enzyme deaminase/reductase genes, complete
             cds; kinamycin biosynthetic gene cluster, partial sequence
             and unknown genes
          Length = 34564

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 150   gacgacgaggagcgctggctcgccgagg 177
             |||||||||||| |||| ||||||||||
Sbjct: 33039 gacgacgaggagagctgcctcgccgagg 33066
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>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete
             sequence
          Length = 111882

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   cgccgagggcatcgccggcg 189
             ||||||||||||||||||||
Sbjct: 36410 cgccgagggcatcgccggcg 36429
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>gb|AE004905.1| Pseudomonas aeruginosa PAO1, section 466 of 529 of the complete
            genome
          Length = 10822

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 167  gctcgccgagggcatcgccggcgtccag 194
            ||||||| ||||||||||||||| ||||
Sbjct: 3092 gctcgccaagggcatcgccggcgcccag 3119
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 134     gcccgacggcggcggtgacg 153
               ||||||||||||||||||||
Sbjct: 2031104 gcccgacggcggcggtgacg 2031123
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>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0434D08
          Length = 161266

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    cgacggcggcggtgacgacg 156
              ||||||||||||||||||||
Sbjct: 136334 cgacggcggcggtgacgacg 136353
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>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            clone:P0503G09
          Length = 59843

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  cgacggcggcggtgacgacg 156
            ||||||||||||||||||||
Sbjct: 7029 cgacggcggcggtgacgacg 7048
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>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1294_G12
          Length = 121979

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   ggcggcggtgacgacgaggagcgc 164
             ||||||||||||||||| ||||||
Sbjct: 80865 ggcggcggtgacgacgacgagcgc 80888
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>dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0428A03
          Length = 136799

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   ggcggcggtgacgacgaggagcgc 164
             ||||||||||||||||| ||||||
Sbjct: 30857 ggcggcggtgacgacgacgagcgc 30880
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>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0016H06
          Length = 148158

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 141    ggcggcggtgacgacgaggagcgc 164
              ||||||||||||||||| ||||||
Sbjct: 108008 ggcggcggtgacgacgacgagcgc 107985
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>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_A05
          Length = 120823

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   gcggcggtgacgacgaggag 161
             ||||||||||||||||||||
Sbjct: 60065 gcggcggtgacgacgaggag 60046
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>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0415B12
          Length = 157419

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 141   ggcggcggtgacgacgaggagcgc 164
             ||||||||||||||||| ||||||
Sbjct: 31798 ggcggcggtgacgacgacgagcgc 31775
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>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 141    ggcggcggtgacgacgaggagcgc 164
              ||||||||||||||||| ||||||
Sbjct: 139070 ggcggcggtgacgacgacgagcgc 139047
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>dbj|AK099319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033003F07, full
           insert sequence
          Length = 1570

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 gcggcggtgacgacgaggag 161
           ||||||||||||||||||||
Sbjct: 110 gcggcggtgacgacgaggag 91
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>dbj|AK059852.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-G10, full
           insert sequence
          Length = 1098

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 170 cgccgagggcatcgccggcg 189
           ||||||||||||||||||||
Sbjct: 73  cgccgagggcatcgccggcg 54
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>dbj|AK059111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-E02, full
           insert sequence
          Length = 1648

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 gcggcggtgacgacgaggag 161
           ||||||||||||||||||||
Sbjct: 117 gcggcggtgacgacgaggag 98
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>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete
             sequence
          Length = 103264

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 135   cccgacggcggcggtgacgacgaggagc 162
             |||||||||| ||||| |||||||||||
Sbjct: 49247 cccgacggcgacggtggcgacgaggagc 49220


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,361,021
Number of Sequences: 3902068
Number of extensions: 1361021
Number of successful extensions: 107203
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104064
Number of HSP's gapped (non-prelim): 3139
length of query: 220
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 198
effective length of database: 17,147,199,772
effective search space: 3395145554856
effective search space used: 3395145554856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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