Clone Name | bastl23e05 |
---|---|
Clone Library Name | barley_pub |
>emb|AL590733.8| Human DNA sequence from clone RP11-193D23 on chromosome 6 Contains the 3' end of the FLJ14440 gene for thrombospondin, complete sequence Length = 135507 Score = 38.2 bits (19), Expect = 1.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 aaatttagtgatttctgta 19 ||||||||||||||||||| Sbjct: 54497 aaatttagtgatttctgta 54479
>emb|BX927361.31| Zebrafish DNA sequence from clone CH211-121K8 in linkage group 9, complete sequence Length = 177986 Score = 38.2 bits (19), Expect = 1.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 ttagtgatttctgtacgtg 23 ||||||||||||||||||| Sbjct: 10109 ttagtgatttctgtacgtg 10127
>gb|AC150430.3| Branchiostoma floridae clone CH302-99K22, complete sequence Length = 131908 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 aaatttagtgatttctgt 18 |||||||||||||||||| Sbjct: 91756 aaatttagtgatttctgt 91773
>emb|AL590082.9| Human DNA sequence from clone RP11-252E11 on chromosome 1, complete sequence Length = 117032 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 aatttagtgatttctgta 19 |||||||||||||||||| Sbjct: 39485 aatttagtgatttctgta 39502
>gb|AC093318.52| Mus musculus strain C57BL/6J clone rp23-252h7 map 1, complete sequence Length = 198381 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 20 cgtggttgatccattcca 37 |||||||||||||||||| Sbjct: 90429 cgtggttgatccattcca 90412
>emb|BX323811.14| Zebrafish DNA sequence from clone DKEY-234H16 in linkage group 5, complete sequence Length = 204094 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 24 gttgatccattccacagg 41 |||||||||||||||||| Sbjct: 203654 gttgatccattccacagg 203637
>emb|BX547941.7| Zebrafish DNA sequence from clone RP71-1C23 in linkage group 5, complete sequence Length = 137259 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 24 gttgatccattccacagg 41 |||||||||||||||||| Sbjct: 1560 gttgatccattccacagg 1543
>gb|AY135690.1| Mus musculus argonaute 4 protein (Ago4) gene, complete cds Length = 92047 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 aatttagtgatttctgta 19 |||||||||||||||||| Sbjct: 88183 aatttagtgatttctgta 88200
>gb|AY135687.1| Mus musculus argonaute 1 protein (Ago1) gene, partial cds Length = 64211 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 aatttagtgatttctgta 19 |||||||||||||||||| Sbjct: 4312 aatttagtgatttctgta 4329
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 aaatttagtgatttctgt 18 |||||||||||||||||| Sbjct: 251598 aaatttagtgatttctgt 251615
>gb|AC154401.2| Mus musculus BAC clone RP23-166O7 from 13, complete sequence Length = 199694 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 gatttctgtacgtggttg 27 |||||||||||||||||| Sbjct: 71290 gatttctgtacgtggttg 71273
>emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chromosome 4, complete sequence Length = 213391 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 aatttagtgatttctgta 19 |||||||||||||||||| Sbjct: 30095 aatttagtgatttctgta 30078 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 275,621 Number of Sequences: 3902068 Number of extensions: 275621 Number of successful extensions: 74053 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74027 Number of HSP's gapped (non-prelim): 26 length of query: 41 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 21 effective length of database: 17,155,003,908 effective search space: 360255082068 effective search space used: 360255082068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)