ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl23d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase... 62 3e-10
2LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) 62 4e-10
3LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) 60 2e-09
4LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12) 44 1e-04
5LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12) 41 7e-04
6LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12) 40 0.002
7LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12) 37 0.011
8LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2) 37 0.018
9LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12) 35 0.054
10LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena... 34 0.092
11LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12) 34 0.12
12LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12) 33 0.27
13LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12) 32 0.59
14LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12) 31 0.78
15LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12) 31 0.78
16PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing famil... 31 1.0
17LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3) 30 1.3
18UL14_EHV1V (P84404) Hypothetical gene 48 protein 30 1.7
19UL14_EHV1B (P28949) Hypothetical gene 48 protein 30 1.7
20LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94) 29 2.9
21PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine ... 29 3.9
22IWS1_XENTR (Q505H7) IWS1-like protein 28 5.0
23GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chl... 28 5.0
242A5R_MOUSE (Q9Z176) Protein phosphatase 2A, 59 kDa regulatory su... 28 6.6
25LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1) 28 8.6
26IWS1A_XENLA (Q6DE96) IWS1-like protein A 28 8.6
27BLI3_NEUCR (Q01358) Protein bli-3 28 8.6

>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 30/44 (68%), Positives = 37/44 (84%)
 Frame = +2

Query: 74  VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205
           +GGI+  LTG  + A LKGS+VLMRKNALD NDFGATV+DG++E
Sbjct: 2   LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISE 44



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>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 62.0 bits (149), Expect = 4e-10
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +2

Query: 74  VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205
           +GG++  LTG  + A LKG+VVLMRKN LD NDFGAT++DG+ E
Sbjct: 3   LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGE 46



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>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +2

Query: 74  VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205
           +GGI+  +TG  + + LKG+VVLMRKN LD NDFGATV+DG+ E
Sbjct: 2   LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGE 45



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>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 20/44 (45%), Positives = 31/44 (70%)
 Frame = +2

Query: 74  VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205
           +GGIV  + G      +KG V+LM+KN LDF + GA+V+DG+++
Sbjct: 3   LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISD 46



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>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
          Length = 860

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
 Frame = +2

Query: 83  IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTE 205
           ++  L GGL G H     +KG+VV+M+KNALDF D   ++ D + E
Sbjct: 1   MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFE 46



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>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
 Frame = +2

Query: 95  LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205
           LTGG        +KG+VVLM+KN LDFNDF A+ +D + E
Sbjct: 9   LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHE 48



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>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = +2

Query: 110 RGAHLKGSVVLMRKNALDFNDFGATVMDGV 199
           RG  +KG+VVLM KN  DFN+F +T   G+
Sbjct: 7   RGHKIKGTVVLMTKNVFDFNEFVSTTRGGI 36



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>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 65  MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFN 169
           MF V G+   L  G  G H +KG+VVLMRKN LDFN
Sbjct: 1   MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFN 34



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>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 35.0 bits (79), Expect = 0.054
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
 Frame = +2

Query: 83  IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATV 187
           ++  +T GL G H     +KG+VV+M KN LDF D   ++
Sbjct: 1   MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSL 40



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>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 34.3 bits (77), Expect = 0.092
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 74  VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205
           +GG+   LTG   G  +KG  VLM +  LD  DF A+++D V E
Sbjct: 2   LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHE 44



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>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +2

Query: 89  SDLTGGL-RGAHLKGSVVLMRKNALDFNDFGATVMDGV 199
           S +TG L RG  +KG+VVLMRKN LD N    T + GV
Sbjct: 3   SGVTGILNRGHKIKGTVVLMRKNVLDINSL--TTVGGV 38



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>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 32.7 bits (73), Expect = 0.27
 Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
 Frame = +2

Query: 92  DLTGGLRGAH-LKGSVVLMRKNALDFN 169
           ++TG L   H ++G+VVLMRKN LDFN
Sbjct: 4   NVTGLLNKGHKIRGTVVLMRKNVLDFN 30



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>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 31.6 bits (70), Expect = 0.59
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +2

Query: 110 RGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205
           +G  +KG+VVLM KN LDFN   +    GV +
Sbjct: 7   KGQKIKGTVVLMPKNVLDFNAITSIGKGGVID 38



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>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 31.2 bits (69), Expect = 0.78
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +2

Query: 110 RGAHLKGSVVLMRKNALDFN 169
           RG  LKG+V+LM+KN LD N
Sbjct: 8   RGQKLKGTVILMQKNVLDIN 27



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>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score = 31.2 bits (69), Expect = 0.78
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
 Frame = +2

Query: 74  VGGIVSDLTGGLRGA----HLKGSVVLMRKNALDFNDFGATVMDGV 199
           V G    LTG  + A     ++G+ VL++K+ L   DF A+++DGV
Sbjct: 3   VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGV 48



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>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -2

Query: 195 PSMTVAPKSLKSSAFLRIRTTEPLRWAPRRPPVRSLTMPPTP 70
           PS   AP +   +   RI    PL W P+R   ++L+ PPTP
Sbjct: 259 PSGDTAPPARPHTPLSRIDVRPPLDWGPQR---QTLSRPPTP 297



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>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = +2

Query: 95  LTGGL--RGAHLKGSVVLMRKNALDFN 169
           + GGL  RG  +KG+VVLMRKN L  N
Sbjct: 1   MLGGLLHRGHKIKGTVVLMRKNVLHVN 27



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>UL14_EHV1V (P84404) Hypothetical gene 48 protein|
          Length = 317

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
 Frame = -1

Query: 205 LGDAVHD-----GGAEVVEVERVLAHKDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGE 44
           LGD + D     GG EV + +  L H+D+  L      EAPR     AAD    RS    
Sbjct: 120 LGDVLSDINCDGGGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPA 179

Query: 43  CGTLAKLARCG 11
                + ARCG
Sbjct: 180 PRKAPEDARCG 190



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>UL14_EHV1B (P28949) Hypothetical gene 48 protein|
          Length = 317

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
 Frame = -1

Query: 205 LGDAVHD-----GGAEVVEVERVLAHKDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGE 44
           LGD + D     GG EV + +  L H+D+  L      EAPR     AAD    RS    
Sbjct: 120 LGDVLSDINCDGGGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPA 179

Query: 43  CGTLAKLARCG 11
                + ARCG
Sbjct: 180 PRKAPEDARCG 190



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>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 104 GLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205
           G +G  +KG++V+M+KN LD N    T + G+ +
Sbjct: 5   GQKGQKIKGTMVVMQKNVLDINSI--TSVGGIVD 36



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>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate|
           kinase) (UMP kinase)
          Length = 245

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +2

Query: 44  LPRDRAKMFGVGG----IVSDLTGGLRGAHLKGSVVLMRKNALD 163
           L + R  +FG G       +D T  LR   +   VVLM KNA+D
Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170



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>IWS1_XENTR (Q505H7) IWS1-like protein|
          Length = 909

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
 Frame = -1

Query: 187 DGGAEVVEVERVLAHKDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 47
           DGGA  V+ ER  A  D+G       E G+PE   +  H D  D KH RS SG
Sbjct: 15  DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66



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>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast|
           precursor (EC 1.4.7.1) (Fd-GOGAT)
          Length = 1616

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 115 APEAPRQVAHDAADAKHLRSISGECG 38
           AP AP++    AAD  H+ S  G CG
Sbjct: 74  APPAPQKPTQQAADLNHILSERGACG 99



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>2A5R_MOUSE (Q9Z176) Protein phosphatase 2A, 59 kDa regulatory subunit B (PP2A|
           PR59) (PP2A B''-PR59)
          Length = 491

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 114 PRRPPVRSLTMPPTPNIFARSLGSVAR 34
           P RPP+R+L   P     A++L S+AR
Sbjct: 2   PERPPIRALRRDPDDPAVAQALASLAR 28



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>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 113 GAHLKGSVVLMRKNALDFNDFGATV 187
           G  +KG+VVLM KN L+ N  G+ V
Sbjct: 5   GHKIKGTVVLMPKNELEVNPDGSAV 29



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>IWS1A_XENLA (Q6DE96) IWS1-like protein A|
          Length = 836

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = -1

Query: 187 DGGAEVVEVERVLAHKDDG---ALEVGAPEAPRQVAH-DAADAKH 65
           DGGA  V+ ER  A  D+G     E G+PE   +  H D  D KH
Sbjct: 13  DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57



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>BLI3_NEUCR (Q01358) Protein bli-3|
          Length = 209

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
 Frame = -1

Query: 205 LGDAVHDGGAE-----VVEVERVLAH 143
           LGD VHDGG E     V+ V+ V AH
Sbjct: 139 LGDGVHDGGPEDPRVGVIRVKMVTAH 164


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,098,314
Number of Sequences: 219361
Number of extensions: 334711
Number of successful extensions: 1766
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1765
length of database: 80,573,946
effective HSP length: 43
effective length of database: 71,141,423
effective search space used: 1707394152
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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