Clone Name | bastl23d03 |
---|---|
Clone Library Name | barley_pub |
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 62.4 bits (150), Expect = 3e-10 Identities = 30/44 (68%), Positives = 37/44 (84%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205 +GGI+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISE 44
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 62.0 bits (149), Expect = 4e-10 Identities = 27/44 (61%), Positives = 35/44 (79%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205 +GG++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGE 46
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 60.1 bits (144), Expect = 2e-09 Identities = 27/44 (61%), Positives = 35/44 (79%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205 +GGI+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGE 45
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 43.9 bits (102), Expect = 1e-04 Identities = 20/44 (45%), Positives = 31/44 (70%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205 +GGIV + G +KG V+LM+KN LDF + GA+V+DG+++ Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISD 46
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 41.2 bits (95), Expect = 7e-04 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 5/46 (10%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTE 205 ++ L GGL G H +KG+VV+M+KNALDF D ++ D + E Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFE 46
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 40.0 bits (92), Expect = 0.002 Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 3/40 (7%) Frame = +2 Query: 95 LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205 LTGG +KG+VVLM+KN LDFNDF A+ +D + E Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHE 48
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 37.4 bits (85), Expect = 0.011 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGATVMDGV 199 RG +KG+VVLM KN DFN+F +T G+ Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGI 36
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 36.6 bits (83), Expect = 0.018 Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 1/36 (2%) Frame = +2 Query: 65 MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFN 169 MF V G+ L G G H +KG+VVLMRKN LDFN Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFN 34
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 35.0 bits (79), Expect = 0.054 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 5/40 (12%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATV 187 ++ +T GL G H +KG+VV+M KN LDF D ++ Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSL 40
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 34.3 bits (77), Expect = 0.092 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205 +GG+ LTG G +KG VLM + LD DF A+++D V E Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHE 44
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 33.9 bits (76), Expect = 0.12 Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Frame = +2 Query: 89 SDLTGGL-RGAHLKGSVVLMRKNALDFNDFGATVMDGV 199 S +TG L RG +KG+VVLMRKN LD N T + GV Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSL--TTVGGV 38
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 32.7 bits (73), Expect = 0.27 Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%) Frame = +2 Query: 92 DLTGGLRGAH-LKGSVVLMRKNALDFN 169 ++TG L H ++G+VVLMRKN LDFN Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFN 30
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 31.6 bits (70), Expect = 0.59 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205 +G +KG+VVLM KN LDFN + GV + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVID 38
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 31.2 bits (69), Expect = 0.78 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFN 169 RG LKG+V+LM+KN LD N Sbjct: 8 RGQKLKGTVILMQKNVLDIN 27
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 31.2 bits (69), Expect = 0.78 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%) Frame = +2 Query: 74 VGGIVSDLTGGLRGA----HLKGSVVLMRKNALDFNDFGATVMDGV 199 V G LTG + A ++G+ VL++K+ L DF A+++DGV Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGV 48
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 30.8 bits (68), Expect = 1.0 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -2 Query: 195 PSMTVAPKSLKSSAFLRIRTTEPLRWAPRRPPVRSLTMPPTP 70 PS AP + + RI PL W P+R ++L+ PPTP Sbjct: 259 PSGDTAPPARPHTPLSRIDVRPPLDWGPQR---QTLSRPPTP 297
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 30.4 bits (67), Expect = 1.3 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 2/27 (7%) Frame = +2 Query: 95 LTGGL--RGAHLKGSVVLMRKNALDFN 169 + GGL RG +KG+VVLMRKN L N Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVN 27
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 30.0 bits (66), Expect = 1.7 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%) Frame = -1 Query: 205 LGDAVHD-----GGAEVVEVERVLAHKDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGE 44 LGD + D GG EV + + L H+D+ L EAPR AAD RS Sbjct: 120 LGDVLSDINCDGGGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPA 179 Query: 43 CGTLAKLARCG 11 + ARCG Sbjct: 180 PRKAPEDARCG 190
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 30.0 bits (66), Expect = 1.7 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%) Frame = -1 Query: 205 LGDAVHD-----GGAEVVEVERVLAHKDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGE 44 LGD + D GG EV + + L H+D+ L EAPR AAD RS Sbjct: 120 LGDVLSDINCDGGGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPA 179 Query: 43 CGTLAKLARCG 11 + ARCG Sbjct: 180 PRKAPEDARCG 190
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 29.3 bits (64), Expect = 2.9 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +2 Query: 104 GLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 205 G +G +KG++V+M+KN LD N T + G+ + Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSI--TSVGGIVD 36
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 3.9 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +2 Query: 44 LPRDRAKMFGVGG----IVSDLTGGLRGAHLKGSVVLMRKNALD 163 L + R +FG G +D T LR + VVLM KNA+D Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 28.5 bits (62), Expect = 5.0 Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 6/53 (11%) Frame = -1 Query: 187 DGGAEVVEVERVLAHKDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 47 DGGA V+ ER A D+G E G+PE + H D D KH RS SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 28.5 bits (62), Expect = 5.0 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 Query: 115 APEAPRQVAHDAADAKHLRSISGECG 38 AP AP++ AAD H+ S G CG Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
>2A5R_MOUSE (Q9Z176) Protein phosphatase 2A, 59 kDa regulatory subunit B (PP2A| PR59) (PP2A B''-PR59) Length = 491 Score = 28.1 bits (61), Expect = 6.6 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -2 Query: 114 PRRPPVRSLTMPPTPNIFARSLGSVAR 34 P RPP+R+L P A++L S+AR Sbjct: 2 PERPPIRALRRDPDDPAVAQALASLAR 28
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 27.7 bits (60), Expect = 8.6 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 113 GAHLKGSVVLMRKNALDFNDFGATV 187 G +KG+VVLM KN L+ N G+ V Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV 29
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 27.7 bits (60), Expect = 8.6 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%) Frame = -1 Query: 187 DGGAEVVEVERVLAHKDDG---ALEVGAPEAPRQVAH-DAADAKH 65 DGGA V+ ER A D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57
>BLI3_NEUCR (Q01358) Protein bli-3| Length = 209 Score = 27.7 bits (60), Expect = 8.6 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 5/26 (19%) Frame = -1 Query: 205 LGDAVHDGGAE-----VVEVERVLAH 143 LGD VHDGG E V+ V+ V AH Sbjct: 139 LGDGVHDGGPEDPRVGVIRVKMVTAH 164 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,098,314 Number of Sequences: 219361 Number of extensions: 334711 Number of successful extensions: 1766 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1729 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1765 length of database: 80,573,946 effective HSP length: 43 effective length of database: 71,141,423 effective search space used: 1707394152 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)