Clone Name | bastl23c11 |
---|---|
Clone Library Name | barley_pub |
>Y1441_METJA (Q58836) Hypothetical protein MJ1441| Length = 1226 Score = 32.7 bits (73), Expect = 0.22 Identities = 16/62 (25%), Positives = 28/62 (45%) Frame = -1 Query: 231 MMPSTRRMHCIDKARTPTMRCVRRGTPAARSSAHRPLQDEGPYAASQFPKRVVGSVFWRD 52 ++P+ R + +D R PT R G A +R L++EG Y + + + W D Sbjct: 803 ILPTGRNFYSLDPYRIPTKSAYRVGVLLAEKLINRYLEEEGRYPENIALYWMASDIMWAD 862 Query: 51 AQ 46 + Sbjct: 863 GE 864
>PRD15_HUMAN (P57071) PR domain zinc finger protein 15 (PR domain-containing| protein 15) (Zinc finger protein 298) Length = 1507 Score = 32.0 bits (71), Expect = 0.38 Identities = 31/108 (28%), Positives = 41/108 (37%), Gaps = 9/108 (8%) Frame = +3 Query: 3 TGVAPEATRPRARLPGRHAKTRSQPPSSGIGMRH---MVPRP------ARGGGPKIGLPA 155 +G+A A RP P R A R PP + ++PRP GGP PA Sbjct: 72 SGIALRAARPPGSSPPRPAAPRPPPPGGVVAEAPGDVVIPRPRVQPMRVARGGPWTPNPA 131 Query: 156 YRVGHSAWWASLLYQCSASDA*TASWPRNDPSNEVHVASTATPGQAGL 299 +R S W+ + Q + S NEV +P AGL Sbjct: 132 FREAES--WSQIGNQRVSEQLLETSL-----GNEVSDTEPLSPASAGL 172
>LGT_MYCPA (P60972) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 427 Score = 31.2 bits (69), Expect = 0.65 Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +1 Query: 94 GCGIWSLVLQGAVGRRSGCRRTASDTAHG-GRPCFINAVHP 213 G GIW V GAVG GCRR HG P F +A+ P Sbjct: 100 GLGIWGAVALGAVGAWIGCRR------HGIPLPAFADALAP 134
>FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger protein multitype| 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1) Length = 1004 Score = 30.8 bits (68), Expect = 0.85 Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = +3 Query: 12 APEATRPRARLPGRHAKTRSQPPSSGIGMRHMVPRPARGGGPKIGL-PAYRVGHSA 176 AP TR R +L HA PP G PRP G G GL PA G +A Sbjct: 734 APVRTRRRRKLYELHAAGAPPPPPPGHAPAPESPRPGSGSGSGPGLAPARSPGPAA 789
>LGT2_STRCO (Q9FBW3) Prolipoprotein diacylglyceryl transferase 2 (EC 2.4.99.-)| Length = 317 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/42 (42%), Positives = 20/42 (47%) Frame = +1 Query: 88 ELGCGIWSLVLQGAVGRRSGCRRTASDTAHGGRPCFINAVHP 213 E G GIW + GAVG GCRR P F +AV P Sbjct: 95 EGGLGIWGAIALGAVGAWIGCRRHRIPL-----PAFADAVAP 131
>Y1102_AERPE (Q9YD10) UPF0129 protein APE1102| Length = 139 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -1 Query: 288 DLGSRSKRRALRSMGRFEAMMPSTRRMHCIDKARTPTMR 172 D GSRS L+S GR E + PSTR +++AR R Sbjct: 47 DRGSRSLLELLQSTGRLEVLAPSTR---ALERAREEARR 82
>SOX12_MOUSE (Q04890) SOX-12 protein| Length = 314 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = +3 Query: 27 RPRARLPGRHAKTRSQPPSSGIGMRHMVP---RPARGGGPKIGLP 152 RPR + G AK R +PP G G + P P RGG G P Sbjct: 110 RPRKKSKGAPAKARPRPPGGGGGGSRLKPGPQLPGRGGRRASGGP 154
>TPSN_HUMAN (O15533) Tapasin precursor (TPSN) (TPN) (TAP-binding protein)| (TAP-associated protein) (NGS-17) Length = 448 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = -2 Query: 182 PPCAVSDAVRRQPDLRPTAPCRTRDHMPHPNSRRGWLGACFGVTPRQACPR 30 P A+ A RR P P C +P P S + W G+TP Q CPR Sbjct: 71 PAGALQAAFRRYPRGAPAPHCEMSRFVPLPASAK-WAS---GLTPAQNCPR 117
>BTBDA_PONPY (Q5R585) BTB/POZ domain-containing protein 10| Length = 475 Score = 30.0 bits (66), Expect = 1.4 Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 11/67 (16%) Frame = +1 Query: 118 LQGAVG--RRSGCRRTASDTAHGGR---------PCFINAVHPTRRRHHGLETTHRTKCT 264 L GA G RS RR +SD + PC N PTR+ H E H + Sbjct: 51 LHGASGGHERSRDRRRSSDRSRDSSHERTESQLTPCIRNVTSPTRQHHVEREKDHSSSRP 110 Query: 265 SLRPRPQ 285 S PRPQ Sbjct: 111 S-SPRPQ 116
>BTBDA_MOUSE (Q80X66) BTB/POZ domain-containing protein 10| Length = 475 Score = 30.0 bits (66), Expect = 1.4 Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 11/67 (16%) Frame = +1 Query: 118 LQGAVG--RRSGCRRTASDTAHGGR---------PCFINAVHPTRRRHHGLETTHRTKCT 264 L GA G RS RR +SD + PC N PTR+ H E H + Sbjct: 51 LHGASGGHERSRDRRRSSDRSRDSSHERAESQLTPCIRNVTSPTRQHHIEREKDHSSSRP 110 Query: 265 SLRPRPQ 285 S PRPQ Sbjct: 111 S-SPRPQ 116
>BTBDA_HUMAN (Q9BSF8) BTB/POZ domain-containing protein 10| Length = 475 Score = 30.0 bits (66), Expect = 1.4 Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 11/67 (16%) Frame = +1 Query: 118 LQGAVG--RRSGCRRTASDTAHGGR---------PCFINAVHPTRRRHHGLETTHRTKCT 264 L GA G RS RR +SD + PC N PTR+ H E H + Sbjct: 51 LHGASGGHERSRDRRRSSDRSRDSSHERTESQLTPCIRNVTSPTRQHHVEREKDHSSSRP 110 Query: 265 SLRPRPQ 285 S PRPQ Sbjct: 111 S-SPRPQ 116
>NU4M_XENLA (P03912) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 461 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +1 Query: 169 TAHGGRPCFINAVHPTRRRHHGLETTHRTKCTSLRPRPQV 288 T G P +NA++PT R H L T H L +P++ Sbjct: 416 TQRGMTPEHLNAINPTHTREHTLMTMHLIPIIPLMMKPEL 455
>LGT_STRAW (Q82A79) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 340 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +1 Query: 88 ELGCGIWSLVLQGAVGRRSGCRR 156 E G GIW + GAVG GCRR Sbjct: 95 EGGLGIWGAIALGAVGAWIGCRR 117
>E2F3_MOUSE (O35261) Transcription factor E2F3 (E2F-3)| Length = 457 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +3 Query: 63 TRSQPPSSGIGMRHMVPRPARGGGPKIGLPAYR 161 T Q PSS +G+ P P RGGG G PA R Sbjct: 96 TTPQGPSSRVGLLQQPPAPGRGGGG--GPPAKR 126
>PETO_CHLRE (Q9LLC6) Cytochrome b6-f complex subunit petO, chloroplast| precursor (Cytochrome b6-f-associated phosphoprotein) (Cytochrome b6-f complex subunit V) (suV) Length = 198 Score = 29.3 bits (64), Expect = 2.5 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = -1 Query: 195 KARTPTMRCVRRGTPAARSSAHRPLQDEGPYAASQFPKRVVGSVFWRDAQAGV 37 + +TP C R + R SAH+ ++ AA+ F V +V A AGV Sbjct: 4 RCKTPAATCAARSRRSVRVSAHKGAFEQAQVAAAAF---VAAAVIAAPANAGV 53
>Y3740_MYCTU (O69707) Hypothetical UPF0089 protein Rv3740c/MT3848| Length = 448 Score = 29.3 bits (64), Expect = 2.5 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Frame = -1 Query: 288 DLGSRSKRRALRSMGRFEAMMPSTRRMH--CIDKAR----TPTMRCVRRGTPAARSSAHR 127 DLG ++R AL + GR ++ T R+H +D+ R T + +R G A S H Sbjct: 77 DLGYHARRSALPAPGRVRELLELTSRLHSNLLDRHRPLWETHVIEGLRDGRFAIYSKMHH 136 Query: 126 PLQD 115 L D Sbjct: 137 ALVD 140
>AOAH_RABIT (O18823) Acyloxyacyl hydrolase precursor (EC 3.1.1.77) [Contains:| Acyloxyacyl hydrolase small subunit; Acyloxyacyl hydrolase large subunit] Length = 575 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = +2 Query: 17 RGHSAEGTPAWASRQNTLPTTLFGNWDAAYGPSSCKGRWAEDRAAGVP 160 RG+ G S + P NWDA + S+C G W D G+P Sbjct: 196 RGYHWRGRDCNDSDKTVYPGRRPDNWDA-HRDSNCNGIWGVDPKDGIP 242
>AOAH_HUMAN (P28039) Acyloxyacyl hydrolase precursor (EC 3.1.1.77) [Contains:| Acyloxyacyl hydrolase small subunit; Acyloxyacyl hydrolase large subunit] Length = 575 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = +2 Query: 17 RGHSAEGTPAWASRQNTLPTTLFGNWDAAYGPSSCKGRWAEDRAAGVP 160 RG+ G S ++ P NWD + S+C G W D GVP Sbjct: 197 RGYHWRGRDCNDSDESVYPGRRPNNWDV-HQDSNCNGIWGVDPKDGVP 243
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 28.9 bits (63), Expect = 3.2 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 5/47 (10%) Frame = +3 Query: 27 RPRARLPGRHAKTRSQPPSSGIGMRHM---VPRPA--RGGGPKIGLP 152 RP A PG + + SQ G+G R +PRPA R G P+IG P Sbjct: 171 RPSAPRPGNNPFSSSQ----GMGQRPSPSNIPRPAPPRPGSPRIGAP 213
>ATX2L_HUMAN (Q8WWM7) Ataxin-2-like protein (Ataxin-2 domain protein)| (Ataxin-2-related protein) Length = 1075 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 5/52 (9%) Frame = +3 Query: 15 PEATRPRARLPGRHAKTRSQPPSSGIGMRHMVPRPARG-----GGPKIGLPA 155 P P+A+ P R AKT S P + G + P PA G PK PA Sbjct: 405 PSRMSPKAQRPLRGAKTLSSPSNRPSGETSVPPPPAVGRMYPPRSPKSAAPA 456
>GPDA_SYNY3 (P73033) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 317 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Frame = +3 Query: 162 VGHSAWWASLLYQCSASDA*TASWPRNDPSN--------EVHVASTATPGQAGLPAEFKH 317 +G AW +SL Y + +D T W R P + +V V++ + G + A + Sbjct: 15 LGAGAWGSSLAYVLNNNDIPTQVWSRRSPQSLESMVAGADVIVSAVSIKGVPSVAARLEA 74 Query: 318 INKRRR 335 ++ +RR Sbjct: 75 MDLQRR 80
>POLG_HCVVO (O92531) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3015 Score = 28.5 bits (62), Expect = 4.2 Identities = 30/103 (29%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Frame = -2 Query: 335 SPPLIYMLKLSG*SRLTWGRGRSDVHFVRWVVSRP*CRLRVGC-----TALIKQ-GRPPC 174 SP ++ G TWG SDV +R +RP GC T +K G PPC Sbjct: 511 SPVVVGTTDRKGLPTYTWGANESDVFLLR--STRPPRGSWFGCTWMNSTGFVKTCGAPPC 568 Query: 173 AVSDAVRRQPDLRPTAPCRTRDHMPHPNSRRGWLGACFGVTPR 45 R T C T HP + G+ +TPR Sbjct: 569 ----NTRPVGSGNDTLVCPTDCFRKHPEATYARCGSGPWLTPR 607
>CCD16_BRARE (Q6P0I6) Coiled-coil domain-containing protein 16| Length = 326 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = +2 Query: 134 AEDRAAGVPRRTQRMVGVLALSMQCIRRVDGIMASKRPIERSARRFDR 277 AED G R +R + + MQC+RRV+ + A K+ RS RR R Sbjct: 250 AEDDEEG---RLERQMDEIEEQMQCLRRVEELRA-KQETARSRRRSQR 293
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +3 Query: 6 GVAPEATRPRARLPGRHAKTRSQPPSSGIGMRHMVPRPARGGGP 137 G P A +LP A + PP+ G+G +VP P G GP Sbjct: 29 GKPPSALAGGGQLPVAGAARAAGPPTPGLG---LVPGPGPGPGP 69
>FSTL3_MOUSE (Q9EQC7) Follistatin-related protein 3 precursor (Follistatin-like| 3) (Follistatin-related gene protein) Length = 256 Score = 28.1 bits (61), Expect = 5.5 Identities = 23/75 (30%), Positives = 27/75 (36%) Frame = -2 Query: 251 RWVVSRP*CRLRVGCTALIKQGRPPCAVSDAVRRQPDLRPTAPCRTRDHMPHPNSRRGWL 72 R + RP C C L G C A R TA CR HP+ R + Sbjct: 109 RMLGGRPHCECVPNCEGL-PAGFQVCGSDGATYRDECELRTARCRG-----HPDLRVMYR 162 Query: 71 GACFGVTPRQACPRP 27 G C + CPRP Sbjct: 163 GRCQKSCAQVVCPRP 177
>ADH_MYCPN (P75214) Probable NADP-dependent alcohol dehydrogenase (EC 1.1.1.2)| Length = 351 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Frame = -2 Query: 221 LRVGCTALIKQGRPPCAVSDAVRRQPDLRP--TAPCRTRDH 105 L++G T I++ RP C +DA+ +RP APC + H Sbjct: 7 LKIGATGWIEKPRPVCGPNDAI-----IRPLAVAPCTSDVH 42
>TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 732 Score = 28.1 bits (61), Expect = 5.5 Identities = 25/88 (28%), Positives = 36/88 (40%) Frame = +3 Query: 42 LPGRHAKTRSQPPSSGIGMRHMVPRPARGGGPKIGLPAYRVGHSAWWASLLYQCSASDA* 221 +PG K ++Q PS G G + + G P GLP V S + Q A A Sbjct: 302 VPGEEQKAQTQGPSVGKGTKEASLQEPPGKQPAAGLPGRPV-------SRVPQLKARVA- 353 Query: 222 TASWPRNDPSNEVHVASTATPGQAGLPA 305 ++ N+ A T+TP A P+ Sbjct: 354 ----SKDRTGNDEKKAKTSTPSCAKAPS 377
>LGT_MYCLE (Q9CC52) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 330 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +1 Query: 94 GCGIWSLVLQGAVGRRSGCRR 156 G GIW V G VG GCRR Sbjct: 101 GLGIWGAVALGCVGAWLGCRR 121
>AKAP1_HUMAN (Q92667) A kinase anchor protein 1, mitochondrial precursor| (Protein kinase A-anchoring protein 1) (PRKA1) (A-kinase anchor protein 149 kDa) (AKAP 149) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor prot Length = 903 Score = 28.1 bits (61), Expect = 5.5 Identities = 20/51 (39%), Positives = 24/51 (47%) Frame = +1 Query: 208 HPTRRRHHGLETTHRTKCTSLRPRPQVRRDYPLSLSI*ISGGEETYRIPLE 360 HP RR T T +R RP RRD L + ++GG E IPLE Sbjct: 99 HPPCRRSESSGILPNT--TDMRLRPGTRRDDSTKLELALTGG-EAKSIPLE 146
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 28.1 bits (61), Expect = 5.5 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -3 Query: 166 PTRYAGSPIFGPPPLAGRGTICRIP 92 P +G+P+ GP P G+G + +IP Sbjct: 574 PPPSSGTPLLGPQPFPGQGPMSQIP 598
>CN152_HUMAN (Q8N9Y4) Protein C14orf152| Length = 354 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 169 CPTRYAGSPIFGPPPLAGRGTICRIPIPEEGGW 71 CP +Y G PI+ P PL G + + P+P G W Sbjct: 276 CPFQYHGQPIY-PGPL---GALPQSPVPSLGLW 304
>LAS17_YEAST (Q12446) Proline-rich protein LAS17| Length = 633 Score = 28.1 bits (61), Expect = 5.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Frame = +3 Query: 15 PEATRPRARLPGRHAKTRSQPP-----SSGIGMRHMVPRPARGGGPKIGLPAYR 161 P+ RP +LP R+ + PP + G G+R P P GP P +R Sbjct: 307 PQQNRPLPQLPNRNNRPVPPPPPMRTTTEGSGVRLPAPPPPPRRGPAPPPPPHR 360
>FSTL3_RAT (Q99PW7) Follistatin-related protein 3 precursor (Follistatin-like| 3) (Follistatin-related gene protein) Length = 256 Score = 27.7 bits (60), Expect = 7.2 Identities = 22/75 (29%), Positives = 27/75 (36%) Frame = -2 Query: 251 RWVVSRP*CRLRVGCTALIKQGRPPCAVSDAVRRQPDLRPTAPCRTRDHMPHPNSRRGWL 72 R + RP C C + G C A R TA CR HP+ R + Sbjct: 109 RMLGGRPHCECVSNCEG-VPAGFQVCGSDGATYRDECELRTARCRG-----HPDLRVMYR 162 Query: 71 GACFGVTPRQACPRP 27 G C + CPRP Sbjct: 163 GRCQKSCAQVVCPRP 177
>OBP_BHV1C (P52377) Replication origin binding protein (OBP)| Length = 859 Score = 27.7 bits (60), Expect = 7.2 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 15/81 (18%) Frame = -3 Query: 286 PGVAVEATCTSFDG--SFRGHDAVYASDA----------LH**SKDAHHALCPTRYAGSP 143 PG A +A G S G +A YAS A L + H A+C +G P Sbjct: 5 PGAAADAVRVEGAGACSDGGEEARYASSASLARMLYGADLSERVRRRHPAVCVEHQSGRP 64 Query: 142 IFGPPPLAG---RGTICRIPI 89 + P PLA R T+ R P+ Sbjct: 65 VALPSPLAADARRVTVVRAPM 85
>PRP31_YEAST (P49704) Pre-mRNA-splicing factor 31| Length = 494 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +1 Query: 88 ELGCGIWSLVLQGAVGRRSGCRRTASDTA 174 E+G G+ + LQ AVG SG RR+A + A Sbjct: 407 EVGLGMSNTSLQQAVGATSGSRRSAGNQA 435
>COBN_PSEDE (P29929) Aerobic cobaltochelatase cobN subunit (EC 6.6.1.2)| (Hydrogenobyrinic acid a,c-diamide cobaltochelatase cobN subunit) Length = 1275 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = -1 Query: 231 MMPSTRRMHCIDKARTPTMRCVRRGTPAARSSAHRPLQDEGPYAAS 94 ++P+ R + +D PT G +A R LQD G + +S Sbjct: 871 VLPTGRNFYSVDSRAVPTPAAYELGKKSAELLIRRYLQDHGEWPSS 916
>MUKF_HAEIN (P45185) Chromosome partition protein mukF| Length = 444 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +2 Query: 131 WAEDRAAGVPRRTQRMVGVLALSMQCIRRVDGIM 232 WA+DR + T+R+V +LA+++ R+DG M Sbjct: 14 WAKDREFSLNLPTERLVFLLAIAIYNNERLDGEM 47
>ABIL3_ORYSA (Q5NB83) Probable protein ABIL3 (Abl interactor-like protein 3)| Length = 317 Score = 27.7 bits (60), Expect = 7.2 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Frame = -1 Query: 219 TRRMHCIDKARTP-----TMRCVRRGTPAARSSAHRPLQ-DEGPYAASQFPKRVVGSVFW 58 +R+MH TP TMR R +P+AR + HR A ++ P + S Sbjct: 176 SRKMHKSQSISTPVGRQSTMRSARSPSPSARGTHHRSRSLSPSRKARAKSPSPQIISTQT 235 Query: 57 RDAQAGVP 34 ++ +AG P Sbjct: 236 KETRAGSP 243
>P43_XENLA (P25456) P43 5S RNA-binding protein (42S P43) (Thesaurin-B)| Length = 365 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -3 Query: 136 GPPPLAGRGTICRIPIPEE 80 GP GRGT CR P+ EE Sbjct: 289 GPSKFLGRGTRCRTPVVEE 307
>MUKF_HAEAE (O30867) Chromosome partition protein mukF| Length = 443 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +2 Query: 131 WAEDRAAGVPRRTQRMVGVLALSMQCIRRVDGIM 232 WA+DR + T+R+V +LA+++ R+DG M Sbjct: 14 WAKDREFSLNLPTERLVFLLAIAIYNNERLDGEM 47
>BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 precursor| Length = 1522 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +2 Query: 98 AAYGPSSCKGRWAEDRAAGVPRRT 169 AA+G S C+G WAE R P T Sbjct: 430 AAHGGSECRGPWAESRECYNPECT 453
>BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 precursor| Length = 1522 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +2 Query: 98 AAYGPSSCKGRWAEDRAAGVPRRT 169 AA+G S C+G WAE R P T Sbjct: 430 AAHGGSECRGPWAESRECYNPECT 453
>CCG8_NEUCR (Q01306) Clock-controlled protein 8| Length = 661 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +3 Query: 48 GRHAKTRSQPPSSGIGMRHMVPRPARGGG 134 G+ K+ S SG RHM RP G G Sbjct: 352 GKRTKSSSDTRESGQNKRHMTSRPVNGTG 380
>ZN553_MOUSE (Q3US17) Zinc finger protein 553| Length = 591 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1 Query: 165 RRGTPAARSSAHRPLQDEGPYAASQFPKRVV 73 R+ +PAA ++ HRP + PY + KR V Sbjct: 226 RQPSPAAPAAPHRPKAQDKPYICTDCGKRFV 256
>WRBA1_RHIME (Q92PU3) Flavoprotein wrbA 1| Length = 199 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +1 Query: 100 GIWSLVLQGAVGRRSGCRRTASDTAHGGRPCFINAVHPTRRRHHGL 237 G+W+ +G + + G T+S T HGG+ I + PT HHG+ Sbjct: 96 GLWA---KGKLVGKVGSAFTSSATQHGGQESTILGLIPT-MMHHGM 137
>OXAL2_MOUSE (Q8VC74) Probable inner membrane protein OXA1L2, mitochondrial| precursor Length = 331 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = +2 Query: 41 PAWAS-RQNTLPTTLFGNWDAAYGPSSCKGRWAEDRAAGVPRRTQRMV 181 PAW+S R LP W AA ++ G W E AA P RT V Sbjct: 25 PAWSSARLPALPV-----WAAASVSAASPGGWYEALAASAPVRTAEEV 67
>MOAA2_PSEAE (Q9I3K7) Molybdenum cofactor biosynthesis protein A 2| Length = 331 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Frame = +1 Query: 232 GLETTHR---TKCTSLRPRPQVRRDYPLSLSI*ISGGEETY 345 G T+HR T CTS R + R +PL+ S+ SGG Y Sbjct: 196 GSITSHRRELTLCTSDEVRAIIERRWPLTPSLARSGGPSRY 236
>NFKB1_HUMAN (P19838) Nuclear factor NF-kappa-B p105 subunit (DNA-binding factor| KBF1) (EBP-1) [Contains: Nuclear factor NF-kappa-B p50 subunit] Length = 968 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = +3 Query: 15 PEATRPRARLP--GRHAKTRSQPPSSGIGMRHMVPRPARGGGP 137 PE +P+ LP G + + QP G R++ P+ GG P Sbjct: 28 PEVFQPQMALPTDGPYLQILEQPKQRGFRFRYVCEGPSHGGLP 70
>US6NL_HUMAN (Q92738) USP6 N-terminal-like protein (Related to the N-terminus of| tre) (RN-tre) Length = 828 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -2 Query: 128 APCRTRDHMPHPNSRRGWLGACFGVTPRQACP 33 AP R +H PHP SR G TP +A P Sbjct: 407 APHRRHEHSPHPQSRTG--------TPERAQP 430
>PTK2_CANGA (Q6FRE7) Serine/threonine-protein kinase PTK2 (EC 2.7.11.1)| Length = 777 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +3 Query: 204 SASDA*TASWPRNDPSN-EVHVASTATPGQAGLPAEFKH 317 S S A TA PR DPSN +H +T+T G AG + H Sbjct: 728 SVSGAATAPIPRRDPSNRSIHSNATST-GTAGRKKKVVH 765
>LGT_MYCTU (O06131) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 468 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +1 Query: 94 GCGIWSLVLQGAVGRRSGCRRTASDTAHGGRPCFINAVHP 213 G GIW V G +G GCRR P ++AV P Sbjct: 100 GLGIWGAVTLGVMGAWIGCRRCGIPL-----PVLLDAVAP 134
>LGT_MYCBO (Q7VEW5) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 468 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +1 Query: 94 GCGIWSLVLQGAVGRRSGCRRTASDTAHGGRPCFINAVHP 213 G GIW V G +G GCRR P ++AV P Sbjct: 100 GLGIWGAVTLGVMGAWIGCRRCGIPL-----PVLLDAVAP 134
>BCHH_CHLVI (O50314) Magnesium-chelatase subunit H (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase subunit H) Length = 1279 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/58 (27%), Positives = 27/58 (46%) Frame = -1 Query: 231 MMPSTRRMHCIDKARTPTMRCVRRGTPAARSSAHRPLQDEGPYAASQFPKRVVGSVFW 58 ++PS R +H ID R P+ +RGT A + + + Q+P+ + V W Sbjct: 879 VLPSGRNIHSIDPWRIPSETAFKRGTLIADGLISKHVAEND----GQYPE-TIAEVIW 931 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,004,140 Number of Sequences: 219361 Number of extensions: 1490064 Number of successful extensions: 4664 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 4406 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4660 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)