ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl23c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL121900.26|HSBA379J5 Human DNA sequence from clone RP11-379... 42 0.64
2emb|AL024498.13|HS417M14 Human DNA sequence from clone RP3-417M1... 42 0.64
3gb|AC099778.2| Homo sapiens chromosome 3 clone RP11-708J19, comp... 42 0.64
4gb|AC112512.6| Homo sapiens 3 BAC RP11-717D12 (Roswell Park Canc... 42 0.64
5dbj|AP005433.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 0.64
6emb|AL133319.24| Human DNA sequence from clone RP11-394G3 on chr... 40 2.5
7gb|AC003950.1|AC003950 Homo sapiens chromosome 17, clone hCIT.12... 40 2.5
8gb|AC124011.4| Mus musculus BAC clone RP23-218I3 from 9, complet... 40 2.5
9gb|AC156638.2| Mus musculus BAC clone RP24-255L24 from chromosom... 40 2.5
10gb|AY727534.1| Toxoplasma gondii calcium ATPase SERCA-like mRNA,... 38 10.0
11gb|AC130657.9| Mus musculus chromosome 1, clone RP23-307H3, comp... 38 10.0
12gb|AC151369.4| Aotus nancymaae clone CH258-279B4, complete sequence 38 10.0
13ref|XM_508432.1| PREDICTED: Pan troglodytes similar to solute ca... 38 10.0
14gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold 38 10.0
15gb|BT016795.1| Zea mays clone Contig628 mRNA sequence 38 10.0
16gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromo... 38 10.0
17gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 38 10.0
18gb|AC125275.8| Mus musculus chromosome 7, clone RP24-165E9, comp... 38 10.0
19gb|AC123052.4| Mus musculus chromosome 13 clone RP24-373D10, com... 38 10.0
20emb|CT009533.6| Platypus DNA sequence from clone XX-522J9, compl... 38 10.0
21gb|AC004881.1| Homo sapiens PAC clone RP4-765G7 from 7, complete... 38 10.0
22gb|AC136717.10| Mus musculus chromosome 7, clone RP23-48C24, com... 38 10.0
23gb|AC101879.8| Mus musculus chromosome 7, clone RP23-378H21, com... 38 10.0
24gb|AC108435.5| Mus musculus chromosome 7, clone RP23-229O20, com... 38 10.0
25emb|CR956375.5| Pig DNA sequence from clone CH242-268P22 on chro... 38 10.0
26emb|AL583838.7| Human DNA sequence from clone RP11-536O4 on chro... 38 10.0
27emb|AL441988.11| Human DNA sequence from clone RP11-348I14 on ch... 38 10.0
28emb|AL353736.11| Human DNA sequence from clone RP11-412P1 on chr... 38 10.0
29emb|AL133344.28| Human DNA sequence from clone RP5-1158H2 on chr... 38 10.0
30emb|AL031587.3|HS1039K5 Human DNA sequence from clone RP5-1039K5... 38 10.0
31gb|AC164097.2| Mus musculus BAC clone RP23-141F18 from chromosom... 38 10.0
32gb|AC136297.6| Homo sapiens chromosome 11, clone CTD-2245O6, com... 38 10.0
33emb|AL646093.9| Mouse DNA sequence from clone RP23-55I2 on chrom... 38 10.0
34gb|AC110607.7| Homo sapiens chromosome 15, clone CTD-2632K10, co... 38 10.0
35gb|AC146662.3| Callithrix jacchus clone CH259-329B2, complete se... 38 10.0
36gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome ... 38 10.0
37gb|AC157607.4| Mus musculus chromosome 1, clone RP23-401G11, com... 38 10.0
38gb|AC123980.19| Pan troglodytes clone rp43-118j16, complete sequ... 38 10.0
39gb|AC046168.12| Homo sapiens chromosome 15, clone RP11-307C19, c... 38 10.0
40gb|AC084364.20| Homo sapiens 12q BAC RP11-626I20 (Roswell Park C... 38 10.0
41gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, co... 38 10.0
42gb|AC160561.2| Mus musculus BAC clone RP23-102D22 from chromosom... 38 10.0
43gb|AC019294.7| Homo sapiens chromosome , clone RP11-24M17, compl... 38 10.0
44dbj|AK156424.1| Mus musculus activated spleen cDNA, RIKEN full-l... 38 10.0
45gb|AC096627.28| Mus musculus strain C57BL/6J clone rp23-77b23 ma... 38 10.0
46gb|AC073333.5| Homo sapiens BAC clone RP11-455J15 from 7, comple... 38 10.0
47gb|AC133096.3| Mus musculus BAC clone RP23-271C13 from chromosom... 38 10.0
48dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
49gb|AC007005.3| Homo sapiens BAC clone RP11-532N23 from 2, comple... 38 10.0
50gb|AC154705.2| Mus musculus BAC clone RP23-131F11 from chromosom... 38 10.0
51gb|AC154664.2| Mus musculus BAC clone RP24-284G3 from chromosome... 38 10.0
52gb|AC111003.3| Homo sapiens BAC clone RP11-263J14 from 4, comple... 38 10.0
53gb|AC018513.5|AC018513 Homo sapiens chromosome 14 clone RP11-58H... 38 10.0
54dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
55dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
56emb|BX511240.5| Zebrafish DNA sequence from clone CH211-113H10, ... 38 10.0
57gb|AC154578.2| Mus musculus BAC clone RP23-375N17 from 16, compl... 38 10.0
58gb|AC154256.2| Mus musculus BAC clone RP24-211C19 from 16, compl... 38 10.0
59emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 38 10.0
60gb|AY103595.1| Zea mays PCO108378 mRNA sequence 38 10.0
61gb|AC161010.3| Pan troglodytes BAC clone CH251-501B6 from chromo... 38 10.0
62emb|AL928867.9| Mouse DNA sequence from clone RP23-468L22 on chr... 38 10.0
63emb|CT010569.11| Mouse DNA sequence from clone RP23-237G24 on ch... 38 10.0
64gb|AC132433.3| Mus musculus BAC clone RP23-214L14 from 13, compl... 38 10.0
65gb|AC137516.3| Mus musculus BAC clone RP23-259P18 from 1, comple... 38 10.0
66gb|AC157492.17| Mus musculus chromosome 3, clone RP24-73C21, com... 38 10.0
67dbj|AP000547.1| Homo sapiens genomic DNA, chromosome 22q11.2, Ca... 38 10.0 
>emb|AL121900.26|HSBA379J5 Human DNA sequence from clone RP11-379J5 on chromosome 20 Contains the 3'
              end of the SEC23B gene for Sec23 (S. cerevisiae) homolog B,
              two novel genes, the 5' end of the HARS2 gene for
              histidyl-tRNA synthetase 2, a pseudogene similar to part of
              homeobox proteins and two CpG islands, complete sequence
          Length = 149933

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 11     ctcccctccccagcataaaca 31
              |||||||||||||||||||||
Sbjct: 119591 ctcccctccccagcataaaca 119571
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>emb|AL024498.13|HS417M14 Human DNA sequence from clone RP3-417M14 on chromosome 6p23-25.1 Contains
              a novel gene, the gene for a novel serine/threonine-protein
              kinase (possible ortholog of rodent MAK (male germ
              cell-associated kinase), the 3' end of the GCMB gene for
              glial cells missing (Drosophila) homolog b and a CpG
              island, complete sequence
          Length = 144189

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 35     ctcagcaggccccatctccaa 55
              |||||||||||||||||||||
Sbjct: 128980 ctcagcaggccccatctccaa 129000
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>gb|AC099778.2| Homo sapiens chromosome 3 clone RP11-708J19, complete sequence
          Length = 212775

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 35     ctcagcaggccccatctccaa 55
              |||||||||||||||||||||
Sbjct: 136050 ctcagcaggccccatctccaa 136070
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>gb|AC112512.6| Homo sapiens 3 BAC RP11-717D12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 176910

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    ctcagcaggccccatctccaa 55
             |||||||||||||||||||||
Sbjct: 27731 ctcagcaggccccatctccaa 27751
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>dbj|AP005433.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-945C19, complete
             sequence
          Length = 146000

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 27    aaacacagctcagcaggccccatctccaa 55
             ||||||| ||||| |||||||||||||||
Sbjct: 48125 aaacacatctcagtaggccccatctccaa 48097
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>emb|AL133319.24| Human DNA sequence from clone RP11-394G3 on chromosome 6 Contains the 5'
              end of the PDE7B gene for phosphodiesterase 7B and a novel
              gene, complete sequence
          Length = 150072

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ccattcctctcccctcccca 22
              ||||||||||||||||||||
Sbjct: 102347 ccattcctctcccctcccca 102328
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>gb|AC003950.1|AC003950 Homo sapiens chromosome 17, clone hCIT.123_J_14, complete sequence
          Length = 117621

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    cagcataaacacagctcagc 40
             ||||||||||||||||||||
Sbjct: 57238 cagcataaacacagctcagc 57219
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>gb|AC124011.4| Mus musculus BAC clone RP23-218I3 from 9, complete sequence
          Length = 208088

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      accattcctctcccctcccc 21
              ||||||||||||||||||||
Sbjct: 176205 accattcctctcccctcccc 176186
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>gb|AC156638.2| Mus musculus BAC clone RP24-255L24 from chromosome 9, complete sequence
          Length = 162792

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     accattcctctcccctcccc 21
             ||||||||||||||||||||
Sbjct: 87321 accattcctctcccctcccc 87340
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>gb|AY727534.1| Toxoplasma gondii calcium ATPase SERCA-like mRNA, complete cds
          Length = 4128

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 142  ggttctggctgcgtcgtac 160
            |||||||||||||||||||
Sbjct: 1285 ggttctggctgcgtcgtac 1303
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>gb|AC130657.9| Mus musculus chromosome 1, clone RP23-307H3, complete sequence
          Length = 198570

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     ccattcctctcccctcccc 21
             |||||||||||||||||||
Sbjct: 49611 ccattcctctcccctcccc 49593
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>gb|AC151369.4| Aotus nancymaae clone CH258-279B4, complete sequence
          Length = 196485

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 37   cagcaggccccatctccaa 55
            |||||||||||||||||||
Sbjct: 5115 cagcaggccccatctccaa 5097
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>ref|XM_508432.1| PREDICTED: Pan troglodytes similar to solute carrier family 43,
            member 1; prostate cancer overexpressed gene 1; L-type
            amino acid transporter 3 (LOC451193), mRNA
          Length = 4053

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 6    ttcctctcccctccccagc 24
            |||||||||||||||||||
Sbjct: 3783 ttcctctcccctccccagc 3765
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>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold
          Length = 1952403

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     cagcaggccccatctccaa 55
              |||||||||||||||||||
Sbjct: 315907 cagcaggccccatctccaa 315889
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>gb|BT016795.1| Zea mays clone Contig628 mRNA sequence
          Length = 1522

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 116 cctcgcattgttcccgaggactccttg 142
           |||||||||||| ||||||||| ||||
Sbjct: 65  cctcgcattgttaccgaggacttcttg 91
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>gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromosome 22, complete
             sequence
          Length = 209755

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     ccattcctctcccctcccc 21
             |||||||||||||||||||
Sbjct: 52420 ccattcctctcccctcccc 52438
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 147    tggctgcgtcgtaccaggg 165
              |||||||||||||||||||
Sbjct: 707705 tggctgcgtcgtaccaggg 707687
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>gb|AC125275.8| Mus musculus chromosome 7, clone RP24-165E9, complete sequence
          Length = 218429

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 36    tcagcaggccccatctccaatctccat 62
             ||||||| |||||||||||| ||||||
Sbjct: 77013 tcagcagaccccatctccaacctccat 77039
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>gb|AC123052.4| Mus musculus chromosome 13 clone RP24-373D10, complete sequence
          Length = 175595

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     cctctcccctccccagcat 26
             |||||||||||||||||||
Sbjct: 10211 cctctcccctccccagcat 10229
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>emb|CT009533.6| Platypus DNA sequence from clone XX-522J9, complete sequence
          Length = 149919

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 8     cctctcccctccccagcat 26
             |||||||||||||||||||
Sbjct: 40103 cctctcccctccccagcat 40085
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>gb|AC004881.1| Homo sapiens PAC clone RP4-765G7 from 7, complete sequence
          Length = 143138

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    ataaacacagctcagcagg 43
             |||||||||||||||||||
Sbjct: 38582 ataaacacagctcagcagg 38600
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>gb|AC136717.10| Mus musculus chromosome 7, clone RP23-48C24, complete sequence
          Length = 222854

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     ccattcctctcccctcccc 21
             |||||||||||||||||||
Sbjct: 39419 ccattcctctcccctcccc 39401
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>gb|AC101879.8| Mus musculus chromosome 7, clone RP23-378H21, complete sequence
          Length = 174481

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 36    tcagcaggccccatctccaatctccat 62
             ||||||| |||||||||||| ||||||
Sbjct: 57826 tcagcagaccccatctccaacctccat 57800
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>gb|AC108435.5| Mus musculus chromosome 7, clone RP23-229O20, complete sequence
          Length = 203281

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      ccattcctctcccctcccc 21
              |||||||||||||||||||
Sbjct: 162029 ccattcctctcccctcccc 162011
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>emb|CR956375.5| Pig DNA sequence from clone CH242-268P22 on chromosome 17, complete
             sequence
          Length = 79274

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     tcctctcccctccccagca 25
             |||||||||||||||||||
Sbjct: 11513 tcctctcccctccccagca 11531
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>emb|AL583838.7| Human DNA sequence from clone RP11-536O4 on chromosome 6, complete
             sequence
          Length = 121958

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    cagcaggccccatctccaa 55
             |||||||||||||||||||
Sbjct: 48990 cagcaggccccatctccaa 48972
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>emb|AL441988.11| Human DNA sequence from clone RP11-348I14 on chromosome 20 Contains the
             5' end of a novel gene, the C20orf80 gene for a protein
             similar to FSHD region gene 1 (FRG1), the MLLT10L gene for
             myeloid/lymphoid or mixed-lineage leukemia (trithorax
             homolog, Drosophila) (translocated to 10)-like pseudogene,
             a novel gene and two CpG islands, complete sequence
          Length = 69918

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    cagcaggccccatctccaa 55
             |||||||||||||||||||
Sbjct: 62483 cagcaggccccatctccaa 62501
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>emb|AL353736.11| Human DNA sequence from clone RP11-412P1 on chromosome 9 Contains the
             3' end of the CDK5RAP2 gene for CDK5 regulatory subunit
             associated protein 2 (C48), complete sequence
          Length = 148875

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    cagcaggccccatctccaa 55
             |||||||||||||||||||
Sbjct: 58600 cagcaggccccatctccaa 58618
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>emb|AL133344.28| Human DNA sequence from clone RP5-1158H2 on chromosome Xp11.23-11.4
              Contains part of gene FLJ22843, a KIAA0218 pseudogene, and
              a ribonucleotide reductase M2 polypeptide (RRM2)
              pseudogene, complete sequence
          Length = 168544

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     cagcaggccccatctccaa 55
              |||||||||||||||||||
Sbjct: 107084 cagcaggccccatctccaa 107066
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>emb|AL031587.3|HS1039K5 Human DNA sequence from clone RP5-1039K5 on chromosome 22q12.3-13.2,
              complete sequence
          Length = 142723

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      cctctcccctccccagcat 26
              |||||||||||||||||||
Sbjct: 128034 cctctcccctccccagcat 128052
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>gb|AC164097.2| Mus musculus BAC clone RP23-141F18 from chromosome 16, complete sequence
          Length = 217725

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      ccattcctctcccctcccc 21
              |||||||||||||||||||
Sbjct: 171790 ccattcctctcccctcccc 171808
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>gb|AC136297.6| Homo sapiens chromosome 11, clone CTD-2245O6, complete sequence
          Length = 185908

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    cagcaggccccatctccaa 55
             |||||||||||||||||||
Sbjct: 66087 cagcaggccccatctccaa 66069
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>emb|AL646093.9| Mouse DNA sequence from clone RP23-55I2 on chromosome 11 Contains the
             Kcnj12 gene for potassium inwardly-rectifying channel
             subfamily J member 12, a ribosomal protein L27a (Rpl27a)
             pseudogene, the Tnfrsf13b gene for tumor necrosis factor
             receptor superfamily member 13b, the Usp22 gene for
             ubiquitin specific protease 22, a ribosomal protein S13
             (Rps13) pseudogene, the Aldh3a1 gene for aldehyde
             dehydrogenase family 3 subfamily A1, the 3' end of one
             variant of the Aldh3a2 gene for aldehyde dehydrogenase
             family 3 subfamily A2 and three CpG islands, complete
             sequence
          Length = 241400

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     ccattcctctcccctcccc 21
             |||||||||||||||||||
Sbjct: 41648 ccattcctctcccctcccc 41666
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>gb|AC110607.7| Homo sapiens chromosome 15, clone CTD-2632K10, complete sequence
          Length = 160452

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 29     acacagctcagcaggcccc 47
              |||||||||||||||||||
Sbjct: 138679 acacagctcagcaggcccc 138697
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>gb|AC146662.3| Callithrix jacchus clone CH259-329B2, complete sequence
          Length = 136587

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     cagcaggccccatctccaa 55
              |||||||||||||||||||
Sbjct: 104604 cagcaggccccatctccaa 104586
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>gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome 14, complete
            sequence
          Length = 227675

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 3    ccattcctctcccctcccc 21
            |||||||||||||||||||
Sbjct: 7229 ccattcctctcccctcccc 7247
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>gb|AC157607.4| Mus musculus chromosome 1, clone RP23-401G11, complete sequence
          Length = 200421

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      ccattcctctcccctcccc 21
              |||||||||||||||||||
Sbjct: 101735 ccattcctctcccctcccc 101717
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>gb|AC123980.19| Pan troglodytes clone rp43-118j16, complete sequence
          Length = 145016

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     ccattcctctcccctcccc 21
             |||||||||||||||||||
Sbjct: 42441 ccattcctctcccctcccc 42423
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>gb|AC046168.12| Homo sapiens chromosome 15, clone RP11-307C19, complete sequence
          Length = 180484

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     acacagctcagcaggcccc 47
              |||||||||||||||||||
Sbjct: 139239 acacagctcagcaggcccc 139221
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>gb|AC084364.20| Homo sapiens 12q BAC RP11-626I20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 104791

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    cagcaggccccatctccaa 55
             |||||||||||||||||||
Sbjct: 63970 cagcaggccccatctccaa 63988
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>gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, complete sequence
          Length = 180202

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     cagcaggccccatctccaa 55
              |||||||||||||||||||
Sbjct: 144054 cagcaggccccatctccaa 144036
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>gb|AC160561.2| Mus musculus BAC clone RP23-102D22 from chromosome 12, complete sequence
          Length = 204231

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 7      tcctctcccctccccagca 25
              |||||||||||||||||||
Sbjct: 105312 tcctctcccctccccagca 105330
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>gb|AC019294.7| Homo sapiens chromosome , clone RP11-24M17, complete sequence
          Length = 164310

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    cagcaggccccatctccaa 55
             |||||||||||||||||||
Sbjct: 56244 cagcaggccccatctccaa 56226
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>dbj|AK156424.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830021G03 product:unclassifiable, full
           insert sequence
          Length = 3204

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 3   ccattcctctcccctcccc 21
           |||||||||||||||||||
Sbjct: 929 ccattcctctcccctcccc 947
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>gb|AC096627.28| Mus musculus strain C57BL/6J clone rp23-77b23 map 11, complete sequence
          Length = 264908

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      ccattcctctcccctcccc 21
              |||||||||||||||||||
Sbjct: 219115 ccattcctctcccctcccc 219133
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>gb|AC073333.5| Homo sapiens BAC clone RP11-455J15 from 7, complete sequence
          Length = 165616

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     cattcctctcccctcccca 22
             |||||||||||||||||||
Sbjct: 13359 cattcctctcccctcccca 13341
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>gb|AC133096.3| Mus musculus BAC clone RP23-271C13 from chromosome 1, complete sequence
          Length = 195512

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      ccattcctctcccctcccc 21
              |||||||||||||||||||
Sbjct: 185020 ccattcctctcccctcccc 185038
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 44       ccccatctccaatctccat 62
                |||||||||||||||||||
Sbjct: 11586574 ccccatctccaatctccat 11586592
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>gb|AC007005.3| Homo sapiens BAC clone RP11-532N23 from 2, complete sequence
          Length = 167776

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      ccattcctctcccctcccc 21
              |||||||||||||||||||
Sbjct: 118914 ccattcctctcccctcccc 118932
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>gb|AC154705.2| Mus musculus BAC clone RP23-131F11 from chromosome 16, complete sequence
          Length = 177886

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      ccattcctctcccctcccc 21
              |||||||||||||||||||
Sbjct: 156290 ccattcctctcccctcccc 156272
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>gb|AC154664.2| Mus musculus BAC clone RP24-284G3 from chromosome 14, complete sequence
          Length = 157658

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     ccattcctctcccctcccc 21
             |||||||||||||||||||
Sbjct: 51240 ccattcctctcccctcccc 51222
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>gb|AC111003.3| Homo sapiens BAC clone RP11-263J14 from 4, complete sequence
          Length = 96074

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     ttcctctcccctccccagc 24
             |||||||||||||||||||
Sbjct: 26651 ttcctctcccctccccagc 26633
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>gb|AC018513.5|AC018513 Homo sapiens chromosome 14 clone RP11-58H3 map 14q31, complete sequence
          Length = 190773

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    cagcaggccccatctccaa 55
             |||||||||||||||||||
Sbjct: 62357 cagcaggccccatctccaa 62339
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>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1120F06
          Length = 186712

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     ccccatctccaatctccat 62
              |||||||||||||||||||
Sbjct: 150232 ccccatctccaatctccat 150250
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>dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1272H04
          Length = 87113

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    ccccatctccaatctccat 62
             |||||||||||||||||||
Sbjct: 31946 ccccatctccaatctccat 31964
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>emb|BX511240.5| Zebrafish DNA sequence from clone CH211-113H10, complete sequence
          Length = 175187

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 173    agcggtgccgttcttggag 191
              |||||||||||||||||||
Sbjct: 106022 agcggtgccgttcttggag 106040
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>gb|AC154578.2| Mus musculus BAC clone RP23-375N17 from 16, complete sequence
          Length = 203029

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     ccattcctctcccctcccc 21
             |||||||||||||||||||
Sbjct: 27858 ccattcctctcccctcccc 27840
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>gb|AC154256.2| Mus musculus BAC clone RP24-211C19 from 16, complete sequence
          Length = 160023

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     cattcctctcccctcccca 22
             |||||||||||||||||||
Sbjct: 75073 cattcctctcccctcccca 75055
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 162     agggacagggtagcggtgccgttcttg 188
               |||| |||||| |||||||||||||||
Sbjct: 1015976 agggtcagggtggcggtgccgttcttg 1015950
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>gb|AY103595.1| Zea mays PCO108378 mRNA sequence
          Length = 1960

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 116 cctcgcattgttcccgaggactccttg 142
           |||||||||||| ||||||||| ||||
Sbjct: 651 cctcgcattgttaccgaggacttcttg 677
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>gb|AC161010.3| Pan troglodytes BAC clone CH251-501B6 from chromosome unknown, complete
              sequence
          Length = 157204

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     cagcaggccccatctccaa 55
              |||||||||||||||||||
Sbjct: 101771 cagcaggccccatctccaa 101753
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>emb|AL928867.9| Mouse DNA sequence from clone RP23-468L22 on chromosome 2, complete
             sequence
          Length = 111535

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 32    cagctcagcaggccccatctccaatct 58
             ||||||||||| ||||||| |||||||
Sbjct: 52817 cagctcagcagcccccatcgccaatct 52791
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>emb|CT010569.11| Mouse DNA sequence from clone RP23-237G24 on chromosome 16, complete
              sequence
          Length = 238459

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      ccattcctctcccctcccc 21
              |||||||||||||||||||
Sbjct: 210510 ccattcctctcccctcccc 210528
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>gb|AC132433.3| Mus musculus BAC clone RP23-214L14 from 13, complete sequence
          Length = 229555

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      cctctcccctccccagcat 26
              |||||||||||||||||||
Sbjct: 203835 cctctcccctccccagcat 203853
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>gb|AC137516.3| Mus musculus BAC clone RP23-259P18 from 1, complete sequence
          Length = 162037

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      ccattcctctcccctcccc 21
              |||||||||||||||||||
Sbjct: 152001 ccattcctctcccctcccc 151983
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>gb|AC157492.17| Mus musculus chromosome 3, clone RP24-73C21, complete sequence
          Length = 187001

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      ccattcctctcccctcccc 21
              |||||||||||||||||||
Sbjct: 132039 ccattcctctcccctcccc 132021
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>dbj|AP000547.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome region,
             clone:KB67B5
          Length = 123288

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     ccattcctctcccctcccc 21
             |||||||||||||||||||
Sbjct: 18761 ccattcctctcccctcccc 18779


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,477,069
Number of Sequences: 3902068
Number of extensions: 1477069
Number of successful extensions: 111802
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111527
Number of HSP's gapped (non-prelim): 275
length of query: 200
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 178
effective length of database: 17,147,199,772
effective search space: 3052201559416
effective search space used: 3052201559416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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