>YFF9_SCHPO (O14066) Hypothetical serine-rich protein C1687.09 in chromosome I|
          Length = 1379

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +1

Query: 70  QKVDAAAFCRDQKSYYHQNSFKIPIRETSAATTTHKAPGGV*GSTRFGQQPWFHSPAQLT 249
           Q ++AA   + Q  Y+HQ+S ++PI  +  A  + +       S+   +    H P+  +
Sbjct: 508 QALNAAILNKTQLPYFHQSSSELPISASKRAALSQQTESASKSSSNISEMCDSHPPSNFS 567

Query: 250 L 252
           +
Sbjct: 568 I 568

>GRIP2_RAT (Q9WTW1) Glutamate receptor-interacting protein 2 (GRIP2 protein)|
           (AMPA receptor-interacting protein GRIP2)
          Length = 1043

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 19/74 (25%), Positives = 32/74 (43%)
 Frame = +2

Query: 23  AEHGQGHELSVCSVSPKRWTLLHSVGIRSHIIIKIPSRFQSERRAQQRRPTKRPGEFRVQ 202
           A H   H L++   S +  +L+ +  + + +  K+  R +     Q RRP K P   R+Q
Sbjct: 295 ALHAGDHILAIDGTSTEHCSLVEATKLLASVTEKV--RLEILPAPQSRRPLKPPEAVRIQ 352

Query: 203 LGLDSSHGSTLLPS 244
                 H    +PS
Sbjct: 353 RSEQLHHWDPCVPS 366

>IL3RB_MOUSE (P26955) Cytokine receptor common beta chain precursor|
           (GM-CSF/IL-3/IL-5 receptor common beta-chain) (CD131
           antigen)
          Length = 896

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 170 PTKRPGEFRVQLGLDSSHGSTLLPSSRLDGFCFL 271
           PT  PGE R ++G  S H   LL   ++  +CFL
Sbjct: 791 PTVIPGEPREEVGPASPHPEGLLVLQQVGDYCFL 824

>IL3B2_MOUSE (P26954) Interleukin-3 receptor class 2 beta chain precursor|
           (Interleukin-3 receptor class II beta chain)
           (Colony-stimulating factor 2 receptor, beta 2 chain)
          Length = 878

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 170 PTKRPGEFRVQLGLDSSHGSTLLPSSRLDGFCFL 271
           PT  PGE R ++G  S H   LL   ++  +CFL
Sbjct: 791 PTVIPGEPREEVGPASPHPEGLLVLQQVGDYCFL 824

>KR1_VZVD (P09251) Serine/threonine-protein kinase ORF66 (EC 2.7.11.1)|
          Length = 393

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +2

Query: 110 HIIIKIPSRFQSERRAQQRRPTKRPGEFRVQLGLDSSHGST--LLPSSRLDGFCFLM*RR 283
           H++IK   R  +   A   R    P   +++ G  + +  T  +LP  R D +C+L  +R
Sbjct: 118 HVVIKAGQRQGTATEATVLRALTHPSVVQLK-GTFTYNKMTCLILPRYRTDLYCYLAAKR 176

Query: 284 RVPMC 298
            +P+C
Sbjct: 177 NLPIC 181

>OTP_PARLI (O76971) Homeobox protein orthopedia-related (PLOTP)|
          Length = 364

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +2

Query: 149 RRAQQRRPTKRPGEFRVQLGLDSSHGSTLLPSSRLDGFC 265
           RRA+ ++  K    FR    L  SHG    PS   D FC
Sbjct: 167 RRAKWKKRKKTTNVFRTPGALLPSHGLAQFPSPMNDSFC 205

>OXLA_HUMAN (Q96RQ9) L-amino-acid oxidase precursor (EC 1.4.3.2) (LAAO)|
           (Interleukin-4-induced protein 1) (IL4-induced protein
           1) (Protein Fig-1) (hFIG1)
          Length = 567

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +2

Query: 77  WTLLHSVGIRSHIIIKIPSRFQSERRAQQR 166
           WT +H V +R++++ K+P +     R Q++
Sbjct: 146 WTEVHEVKLRNYVVEKVPEKLGYALRPQEK 175

>RBD2_YEAST (Q12270) Rhomboid protein 2 (EC 3.4.21.-)|
          Length = 262

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 220 PWFHSPAQLTLGWILFLDVASACAYVFAL 306
           P  H PA LT G ++FL      +++FAL
Sbjct: 9   PGGHPPAALTTGLVVFLTAIYLLSFIFAL 37

>Y2073_MYCBO (P65685) Hypothetical protein Mb2073c|
          Length = 854

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -3

Query: 124 FDDNMTSDPYRMQQRPPFGGDRANRELMALPVLGVF 17
           F  +M S P    QRPP    RA R L  L  +GVF
Sbjct: 402 FGPSMASLPIFGAQRPPSESSRARRWLRTLRNIGVF 437

>Y2047_MYCTU (P65684) Hypothetical protein Rv2047c/MT2107|
          Length = 854

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -3

Query: 124 FDDNMTSDPYRMQQRPPFGGDRANRELMALPVLGVF 17
           F  +M S P    QRPP    RA R L  L  +GVF
Sbjct: 402 FGPSMASLPIFGAQRPPSESSRARRWLRTLRNIGVF 437


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,809,076
Number of Sequences: 219361
Number of extensions: 837578
Number of successful extensions: 2382
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2382
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)