>gb|AC140055.4| Mus musculus BAC clone RP23-52F4 from chromosome 7, complete sequence
          Length = 192288

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 211   ggacagcagccatggttccactct 234
             ||||||||||||||||||||||||
Sbjct: 81588 ggacagcagccatggttccactct 81565

>gb|AC165958.2| Mus musculus BAC clone RP23-417I20 from chromosome 16, complete
             sequence
          Length = 186202

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   gatggattttgtttcttgat 273
             ||||||||||||||||||||
Sbjct: 40127 gatggattttgtttcttgat 40108

>gb|AC160517.3| Mus musculus chromosome 8, clone RP23-279A11, complete sequence
          Length = 169477

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   gatggattttgtttcttgat 273
             ||||||||||||||||||||
Sbjct: 77664 gatggattttgtttcttgat 77683

>gb|U95743.1|HUU95743 Homo sapiens chromosome 16 BAC clone CIT987-SK65D3, complete sequence
          Length = 192730

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   cactctcctgcccagctcac 248
             ||||||||||||||||||||
Sbjct: 23066 cactctcctgcccagctcac 23085

>gb|AC158924.6| Mus musculus chromosome 18, clone RP23-109P21, complete sequence
          Length = 254968

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    gatggattttgtttcttgat 273
              ||||||||||||||||||||
Sbjct: 126422 gatggattttgtttcttgat 126441

>emb|AL356974.8| Human DNA sequence from clone RP11-14M11 on chromosome 1, complete
             sequence
          Length = 72013

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   aattccttcaagattccaat 143
             ||||||||||||||||||||
Sbjct: 64238 aattccttcaagattccaat 64219

>emb|AL672260.25| Mouse DNA sequence from clone DN-127L1 on chromosome 3 Contains a
             Saccharomyces cerevisiae Nip7p homolog (pEachy) homolog
             pseudogene, a tumor protein translationally-controlled 1
             (Tpt1) pseudogene, a high mobility group box 2 (Hmgb2)
             pseudogene and the Cd2 gene for CD2 antigen, complete
             sequence
          Length = 169010

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 255   atggattttgtttcttgatgtagc 278
             ||||| ||||||||||||||||||
Sbjct: 45793 atggaatttgtttcttgatgtagc 45816

>gb|DQ272027.1| Mustela vison clone XIII155 microsatellite sequence
          Length = 630

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  acgctgctgcattctgtagg 99
           ||||||||||||||||||||
Sbjct: 374 acgctgctgcattctgtagg 393

>gb|AC124420.4| Mus musculus BAC clone RP24-322N8 from chromosome 12, complete sequence
          Length = 164950

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    gatggattttgtttcttgat 273
              ||||||||||||||||||||
Sbjct: 100116 gatggattttgtttcttgat 100097

>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 186     gggagtttagggttcaactc 205
               ||||||||||||||||||||
Sbjct: 1553139 gggagtttagggttcaactc 1553158

>gb|U95741.1|HSU95741 Human chromosome 16p13.11 BAC clone CIT987SK-777B5 complete sequence
          Length = 96792

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   cactctcctgcccagctcac 248
             ||||||||||||||||||||
Sbjct: 66513 cactctcctgcccagctcac 66532

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    gcgcagcaacgacgacccac 174
              ||||||||||||||||||||
Sbjct: 126136 gcgcagcaacgacgacccac 126155

>emb|AL731692.8| Mouse DNA sequence from clone RP23-245M18 on chromosome X, complete
             sequence
          Length = 169309

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   gatggattttgtttcttgat 273
             ||||||||||||||||||||
Sbjct: 80084 gatggattttgtttcttgat 80065

>emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chromosome 3, complete
              sequence
          Length = 227993

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 255    atggattttgtttcttgatgtagc 278
              ||||| ||||||||||||||||||
Sbjct: 135590 atggaatttgtttcttgatgtagc 135613

>emb|AL808137.4| Mouse DNA sequence from clone RP23-358G23 on chromosome 2, complete
             sequence
          Length = 199593

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   gatggattttgtttcttgat 273
             ||||||||||||||||||||
Sbjct: 12273 gatggattttgtttcttgat 12254


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,650,647
Number of Sequences: 3902068
Number of extensions: 2650647
Number of successful extensions: 48308
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48276
Number of HSP's gapped (non-prelim): 32
length of query: 306
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 284
effective length of database: 17,147,199,772
effective search space: 4869804735248
effective search space used: 4869804735248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)