>gb|AC046195.9| Homo sapiens chromosome 8, clone RP11-238K6, complete sequence
          Length = 161507

 Score = 42.1 bits (21), Expect = 0.21
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     ttcattcatcatgtactttct 24
             |||||||||||||||||||||
Sbjct: 94563 ttcattcatcatgtactttct 94543

>dbj|AK129661.1| Homo sapiens cDNA FLJ26150 fis, clone ADG00494
          Length = 1815

 Score = 42.1 bits (21), Expect = 0.21
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 42  ttcaaaacaaacttcgccaaacttc 66
           |||||||||||||| ||||||||||
Sbjct: 974 ttcaaaacaaacttggccaaacttc 998

>emb|AL163193.5|HS73E6 Homo sapiens chromosome 9 BAC RP11-73E6, complete sequence
          Length = 175931

 Score = 42.1 bits (21), Expect = 0.21
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 42    ttcaaaacaaacttcgccaaacttc 66
             |||||||||||||| ||||||||||
Sbjct: 83866 ttcaaaacaaacttggccaaacttc 83842

>gb|AC132144.3| Mus musculus BAC clone RP23-39L19 from chromosome 2, complete sequence
          Length = 233042

 Score = 40.1 bits (20), Expect = 0.82
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    catcatgtactttctgctct 29
             ||||||||||||||||||||
Sbjct: 84897 catcatgtactttctgctct 84878

>emb|AL445489.10| Human DNA sequence from clone RP11-230L22 on chromosome 9 Contains the 3'
              end of a gene for a novel delta-notch like protein
              (FLJ38464), the 5' end of the gene for a novel protein
              (KIAA1608), a novel gene and two CpG islands, complete
              sequence
          Length = 175869

 Score = 40.1 bits (20), Expect = 0.82
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     catcatgtactttctgctct 29
              ||||||||||||||||||||
Sbjct: 147358 catcatgtactttctgctct 147377

>dbj|AB218617.1| Rattus norvegicus genomic DNA, chromosome 4, clone: CH230-65K18, complete
              sequence
          Length = 193613

 Score = 40.1 bits (20), Expect = 0.82
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     tttctgctctcggttctctg 39
              ||||||||||||||||||||
Sbjct: 130457 tttctgctctcggttctctg 130438

>gb|AC017099.11| Homo sapiens BAC clone RP11-542D13 from 2, complete sequence
          Length = 230426

 Score = 40.1 bits (20), Expect = 0.82
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    ttctctgtcttcaaaacaaa 52
             ||||||||||||||||||||
Sbjct: 95840 ttctctgtcttcaaaacaaa 95859

>gb|AC013272.5| Homo sapiens BAC clone RP11-401C13 from 2, complete sequence
          Length = 172705

 Score = 40.1 bits (20), Expect = 0.82
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     ttctctgtcttcaaaacaaa 52
              ||||||||||||||||||||
Sbjct: 115529 ttctctgtcttcaaaacaaa 115510

>gb|AC018892.8| Homo sapiens BAC clone RP11-499E14 from 2, complete sequence
          Length = 191055

 Score = 40.1 bits (20), Expect = 0.82
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    ttctctgtcttcaaaacaaa 52
             ||||||||||||||||||||
Sbjct: 92702 ttctctgtcttcaaaacaaa 92683

>gb|AC160020.1| Homo sapiens BAC clone RP11-540L21 from 2, complete sequence
          Length = 202084

 Score = 40.1 bits (20), Expect = 0.82
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    ttctctgtcttcaaaacaaa 52
             ||||||||||||||||||||
Sbjct: 36178 ttctctgtcttcaaaacaaa 36159

>gb|AC148026.2| Homo sapiens BAC clone RP11-625I24 from 2, complete sequence
          Length = 159856

 Score = 40.1 bits (20), Expect = 0.82
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    ttctctgtcttcaaaacaaa 52
             ||||||||||||||||||||
Sbjct: 63183 ttctctgtcttcaaaacaaa 63164

>emb|AL773568.19| Mouse DNA sequence from clone RP23-59L23 on chromosome X, complete
             sequence
          Length = 158374

 Score = 40.1 bits (20), Expect = 0.82
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     atgttcattcatcatgtactttct 24
             ||||||||||||||| ||||||||
Sbjct: 70627 atgttcattcatcatatactttct 70604

>emb|AL805959.11| Mouse DNA sequence from clone RP23-391H10 on chromosome 2, complete
              sequence
          Length = 217595

 Score = 40.1 bits (20), Expect = 0.82
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     catcatgtactttctgctct 29
              ||||||||||||||||||||
Sbjct: 198739 catcatgtactttctgctct 198758

>gb|DQ213530.1| Taeniopygia guttata clone 0058P0012H02 nuclear receptor subfamily
          2 group F member 2-like mRNA, complete sequence
          Length = 1369

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 57 gccaaacttcctcttcccccttt 79
          |||||||||||| ||||||||||
Sbjct: 90 gccaaacttcctgttcccccttt 68

>gb|AC165329.8| Mus musculus chromosome 3, clone wi1-298L18, complete sequence
          Length = 40686

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    ctctgtcttcaaaacaaac 53
             |||||||||||||||||||
Sbjct: 27441 ctctgtcttcaaaacaaac 27423

>ref|XM_612041.2| PREDICTED: Bos taurus similar to delta/notch-like EGF-related
           receptor (LOC540552), mRNA
          Length = 1667

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 12  tcatgtactttctgctctc 30
           |||||||||||||||||||
Sbjct: 960 tcatgtactttctgctctc 978

>gb|AC136455.3| Mus musculus BAC clone RP24-481H2 from chromosome 6, complete
            sequence
          Length = 166458

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 10   catcatgtactttctgctc 28
            |||||||||||||||||||
Sbjct: 1209 catcatgtactttctgctc 1191

>gb|AC079855.8| Homo sapiens BAC clone RP11-332L16 from 7, complete sequence
          Length = 143146

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     ctctgtcttcaaaacaaac 53
              |||||||||||||||||||
Sbjct: 117983 ctctgtcttcaaaacaaac 118001

>emb|CT009769.4| Mouse DNA sequence from clone RP23-44C21 on chromosome 9, complete
             sequence
          Length = 197074

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 59    caaacttcctcttccccct 77
             |||||||||||||||||||
Sbjct: 67771 caaacttcctcttccccct 67753

>gb|AC133182.3| Mus musculus BAC clone RP24-181H19 from chromosome 18, complete
             sequence
          Length = 163378

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     ttcattcatcatgtacttt 22
             |||||||||||||||||||
Sbjct: 52612 ttcattcatcatgtacttt 52594

>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete
             sequence
          Length = 205684

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    caaaacaaacttcgccaaa 62
             |||||||||||||||||||
Sbjct: 29773 caaaacaaacttcgccaaa 29791

>gb|AC118224.8| Mus musculus chromosome 10, clone RP23-341N20, complete sequence
          Length = 205533

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 36   tctgtcttcaaaacaaact 54
            |||||||||||||||||||
Sbjct: 6358 tctgtcttcaaaacaaact 6376

>gb|AF022967.1| Caenorhabditis elegans cosmid C13A2, complete sequence
          Length = 35348

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    gttctctgtcttcaaaaca 50
             |||||||||||||||||||
Sbjct: 11151 gttctctgtcttcaaaaca 11169

>emb|AL157763.6| Human DNA sequence from clone RP11-27D9 on chromosome 13q31.2-32.1,
             complete sequence
          Length = 51700

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    ttctctgtcttcaaaacaa 51
             |||||||||||||||||||
Sbjct: 48014 ttctctgtcttcaaaacaa 48032

>ref|XM_791733.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin repeat
            and FYVE domain containing 1 isoform 1 (LOC592196), mRNA
          Length = 4983

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 23   ctgctctcggttctctgtc 41
            |||||||||||||||||||
Sbjct: 1369 ctgctctcggttctctgtc 1351

>gb|AC153539.7| Mus musculus 10 BAC RP23-245C19 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 230854

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    tctgtcttcaaaacaaact 54
             |||||||||||||||||||
Sbjct: 36350 tctgtcttcaaaacaaact 36332

>gb|AC109806.12| Mus musculus chromosome 1, clone RP23-310C14, complete sequence
          Length = 198227

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 8     ttcatcatgtactttctgctctc 30
             ||||||||||||||| |||||||
Sbjct: 65890 ttcatcatgtactttttgctctc 65868

>gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, complete sequence
          Length = 173808

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 34     tctctgtcttcaaaacaaa 52
              |||||||||||||||||||
Sbjct: 121739 tctctgtcttcaaaacaaa 121757

>gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 214029

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     catcatgtactttctgctc 28
              |||||||||||||||||||
Sbjct: 129294 catcatgtactttctgctc 129276

>gb|AC162806.4| Mus musculus BAC clone RP23-95E13 from chromosome 9, complete sequence
          Length = 165949

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    ctgtcttcaaaacaaactt 55
             |||||||||||||||||||
Sbjct: 18781 ctgtcttcaaaacaaactt 18799

>gb|AC140363.3| Mus musculus BAC clone RP23-212M11 from 9, complete sequence
          Length = 217832

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    ctgtcttcaaaacaaactt 55
             |||||||||||||||||||
Sbjct: 41812 ctgtcttcaaaacaaactt 41794

>gb|AC111031.8| Mus musculus chromosome 18, clone RP23-447L21, complete sequence
          Length = 177570

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     ttcattcatcatgtacttt 22
             |||||||||||||||||||
Sbjct: 50916 ttcattcatcatgtacttt 50934

>gb|AC157571.6| Mus musculus BAC clone RP23-111F7 from chromosome 12, complete sequence
          Length = 208117

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     caaaacaaacttcgccaaa 62
              |||||||||||||||||||
Sbjct: 197051 caaaacaaacttcgccaaa 197069

>emb|AL365326.14| Mouse DNA sequence from clone RP23-381K21 on chromosome 1, complete
             sequence
          Length = 189860

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    tctgtcttcaaaacaaact 54
             |||||||||||||||||||
Sbjct: 75809 tctgtcttcaaaacaaact 75791


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,056,544
Number of Sequences: 3902068
Number of extensions: 1056544
Number of successful extensions: 77348
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77275
Number of HSP's gapped (non-prelim): 73
length of query: 79
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 58
effective length of database: 17,151,101,840
effective search space: 994763906720
effective search space used: 994763906720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)