>MMS19_MOUSE (Q9D071) MMS19-like protein (MET18 homolog)|
          Length = 1031

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 21/94 (22%), Positives = 38/94 (40%)
 Frame = +1

Query: 10  DFFEILSKYFPVYFTHGAGDNLGVTRDELSRALMHAFCASPYFEPFAIXXXXXXXXXXXX 189
           + FE+ S YFP+ FT    D  G+ R++L  +L     ++P F  F +            
Sbjct: 214 ELFEVTSCYFPIDFTPPPNDPYGIQREDLILSLRAVLASTPRFAEFLLPLLIEKVDSEIL 273

Query: 190 XXXXXXXRYLDNCIQCYGADRMVAHASAIWFKLK 291
                  + L+ C   YG   +     ++W  ++
Sbjct: 274 SAKLDSLQTLNACCAVYGQKELKDFLPSLWASIR 307

>MMS19_HUMAN (Q96T76) MMS19-like protein (hMMS19) (MET18 homolog)|
          Length = 1030

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 21/94 (22%), Positives = 38/94 (40%)
 Frame = +1

Query: 10  DFFEILSKYFPVYFTHGAGDNLGVTRDELSRALMHAFCASPYFEPFAIXXXXXXXXXXXX 189
           + FE+ S YFP+ FT    D  G+ R++L  +L     ++P F  F +            
Sbjct: 213 ELFEVTSCYFPIDFTPPPNDPHGIQREDLILSLRAVLASTPRFAEFLLPLLIEKVDSEVL 272

Query: 190 XXXXXXXRYLDNCIQCYGADRMVAHASAIWFKLK 291
                  + L+ C   YG   +     ++W  ++
Sbjct: 273 SAKLDSLQTLNACCAVYGQKELKDFLPSLWASIR 306

>MET18_YEAST (P40469) DNA repair/transcription protein MET18/MMS19|
          Length = 1032

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 22/94 (23%), Positives = 37/94 (39%)
 Frame = +1

Query: 10  DFFEILSKYFPVYFTHGAGDNLGVTRDELSRALMHAFCASPYFEPFAIXXXXXXXXXXXX 189
           D F++L  YFP+ F     D   ++  +L  AL  A  A+P F   A             
Sbjct: 215 DLFDVLFCYFPITFKPPKHDPYKISNQDLKTALRSAITATPLFAEDAYSNLLDKLTASSP 274

Query: 190 XXXXXXXRYLDNCIQCYGADRMVAHASAIWFKLK 291
                    L  C++ +G   ++ + + +W  LK
Sbjct: 275 VVKNDTLLTLLECVRKFGGSSILENWTLLWNALK 308

>GP116_RAT (Q9WVT0) Probable G-protein coupled receptor 116 precursor|
           (G-protein coupled hepta-helical receptor Ig-hepta)
          Length = 1349

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -1

Query: 314 EERLKSTSFNLNQIADACATILSAP*H*MQLSKYLKESSFANGREEESLSKSNG 153
           EE     S  +N +      ++ +P    +L KYL++ S + G+EE+ +  S G
Sbjct: 715 EETRACISAPINGLLQLAKALIKSPSQDQKLPKYLRDLSVSTGKEEQDIRSSPG 768

>RIPK5_CHICK (Q6XUX0) Receptor-interacting serine/threonine-protein kinase 5 (EC|
           2.7.11.1) (Dusty protein kinase) (Dusty PK)
          Length = 930

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = -2

Query: 295 LLST*TK*LMR---VQPFYQLHSTECNCPNILRNQALLMEERKKVYLKAMEWQRARNTGL 125
           LLST ++ +++   V+    L+   C C NI  NQA  M+   ++  K +E+ R +   L
Sbjct: 329 LLSTFSRQVLQKHLVEAATSLNEVHCRCLNIFINQAFDMQRDLQITPKRLEYTRRKENEL 388

Query: 124 H 122
           +
Sbjct: 389 Y 389

>IPP_HUMAN (Q9Y573) Actin-binding protein IPP (MIPP protein)|
          Length = 584

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
 Frame = -2

Query: 253 FYQLHS-------TECNCPNILRNQALLMEERKKVYLKAMEWQRARNTGLHRRH 113
           F ++HS       T+     ILR++ L +E+  +V+L AM+W   ++ G  R+H
Sbjct: 166 FLEVHSGEEFLALTKDQLIKILRSEELSIEDEYQVFLAAMQW-ILKDLGKRRKH 218

>IPP_MOUSE (P28575) Actin-binding protein IPP (MIPP protein) (Murine|
           IAP-promoted placenta-expressed protein)
          Length = 584

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -2

Query: 214 ILRNQALLMEERKKVYLKAMEWQRARNTGLHRRH 113
           ILR++ L +E+  +V+L AM+W   ++ G  R+H
Sbjct: 186 ILRSEELSIEDEYQVFLAAMQW-ILKDLGKRRKH 218

>YMX3_CAEEL (P34511) Hypothetical protein K06H7.3|
          Length = 618

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -2

Query: 235 TECNCPNILRNQALLMEERKKVYLKAMEWQRARN 134
           T CNCP    ++A+L+E  + ++ +    ++ARN
Sbjct: 62  TTCNCPVDFGDRAVLLEHYQSLFHRTNTLRKARN 95

>YBA4_YEAST (P35194) Hypothetical 287.5 kDa protein in PDR3-HTA2 intergenic|
           region
          Length = 2493

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 81  NT*IITGSMCEVDRKIFAQNLKK 13
           N  +ITGS  EVDR +F + L K
Sbjct: 815 NERVITGSWTEVDRNVFLKTLSK 837


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,780,121
Number of Sequences: 219361
Number of extensions: 741072
Number of successful extensions: 1608
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)