Clone Name	bastl23a03
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	NUP42_YEAST (P49686) Nucleoporin NUP42 (Nuclear pore protein NUP42)	47	1e-05
2	FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)	44	1e-04
3	NUP98_RAT (P49793) Nuclear pore complex protein Nup98 (Nucleopor...	44	1e-04
4	NUPL_HUMAN (P52594) Nucleoporin-like protein RIP (HIV-1 Rev-bind...	42	3e-04
5	NUPL_BOVIN (Q2TA45) Nucleoporin-like protein RIP (HIV-1 Rev-bind...	42	3e-04
6	NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nu...	42	4e-04
7	NUP98_HUMAN (P52948) Nuclear pore complex protein Nup98-Nup96 pr...	42	4e-04
8	NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58	42	4e-04
9	YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I	42	4e-04
10	PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM ...	42	4e-04
11	GLH4_CAEEL (O76743) ATP-dependent RNA helicase glh-4 (EC 3.6.1.-...	41	6e-04
12	FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncog...	41	8e-04
13	NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nu...	40	0.001
14	PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 12...	40	0.001
15	NUPL2_BRARE (Q6P0U9) Nucleoporin-like 2	40	0.001
16	NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleo...	40	0.002
17	NU100_YEAST (Q02629) Nucleoporin NUP100/NSP100 (Nuclear pore pro...	39	0.003
18	NUP54_DROME (Q9V6B9) Probable nucleoporin Nup54	38	0.005
19	PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM ...	37	0.009
20	NU116_YEAST (Q02630) Nucleoporin NUP116/NSP116 (Nuclear pore pro...	37	0.009
21	GAMP_PROCL (Q7M3P2) Gastrolith matrix protein (Fragment)	37	0.011
22	GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-...	37	0.011
23	NSP1_YEAST (P14907) Nucleoporin NSP1 (Nuclear pore protein NSP1)...	37	0.015
24	FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)	36	0.019
25	NUPL_MOUSE (Q8K2K6) Nucleoporin-like protein RIP (HIV-1 Rev-bind...	36	0.019
26	NUPL_RAT (Q4KLH5) Nucleoporin-like protein RIP (HIV-1 Rev-bindin...	36	0.025
27	NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleo...	35	0.033
28	NU153_HUMAN (P49790) Nuclear pore complex protein Nup153 (Nucleo...	35	0.043
29	NUPL1_HUMAN (Q9BVL2) Nucleoporin p58/p45 (Nucleoporin-like 1)	35	0.043
30	MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)	35	0.056
31	NU145_YEAST (P49687) Nucleoporin NUP145 precursor (EC 3.4.21.-) ...	35	0.056
32	TROP_HUMAN (Q12816) Trophinin (MAGE-D3 antigen)	34	0.073
33	NUP49_YEAST (Q02199) Nucleoporin NUP49/NSP49 (Nuclear pore prote...	34	0.096
34	CU36_MANSE (Q8MUC5) Pupal cuticle protein 36 precursor (MsCP36) ...	34	0.096
35	RGS6_CAEEL (Q18563) Regulator of G-protein signaling rgs-6	34	0.096
36	NUPL2_XENLA (Q5XGN1) Nucleoporin-like 2	34	0.096
37	NUPL2_XENTR (Q5FVW4) Nucleoporin-like 2	34	0.096
38	NUP54_HUMAN (Q7Z3B4) Nucleoporin p54 (54 kDa nucleoporin)	34	0.096
39	AMO1_SCHPO (O74315) Nucleoporin-like protein amo1 (Aberrent micr...	33	0.13
40	NUPL1_MOUSE (Q8R332) Nucleoporin p58/p45 (Nucleoporin-like 1)	33	0.13
41	NUPL1_RAT (P70581) Nucleoporin p58/p45 (Nucleoporin-like 1)	33	0.13
42	NUP57_YEAST (P48837) Nucleoporin NUP57 (Nuclear pore protein NUP57)	33	0.16
43	KCNAE_DROME (Q02280) Potassium voltage-gated channel protein eag...	33	0.16
44	HRBL_MOUSE (Q80WC7) HIV-1 Rev-binding protein-like protein (Rev/...	33	0.16
45	CU36A_MANSE (Q8T634) Pupal cuticle protein 36a precursor (CP36a)	32	0.28
46	VG50_ICHV1 (Q00130) Hypothetical gene 50 protein	32	0.36
47	PUM2_MOUSE (Q80U58) Pumilio homolog 2	32	0.36
48	NUP54_RAT (P70582) Nucleoporin p54 (54 kDa nucleoporin)	32	0.36
49	NUP54_MOUSE (Q8BTS4) Nucleoporin p54 (54 kDa nucleoporin)	32	0.36
50	CDSN_MOUSE (Q7TPC1) Corneodesmosin precursor	32	0.36
51	HBA1_SCHPO (Q09146) Brefeldin A resistance protein (Caffeine res...	32	0.36
52	NU153_RAT (P49791) Nuclear pore complex protein Nup153 (Nucleopo...	32	0.48
53	GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-...	31	0.62
54	EP15R_MOUSE (Q60902) Epidermal growth factor receptor substrate ...	31	0.62
55	K2CB_BOVIN (P04262) Keratin, type II cytoskeletal 68 kDa, compon...	31	0.62
56	YS89_CAEEL (Q09624) Hypothetical protein ZK945.9	31	0.62
57	SEC9_DEBHA (Q6BKU3) Protein transport protein SEC9	31	0.81
58	AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor	31	0.81
59	FBSH_MOUSE (Q8R089) Probable fibrosin-1 long transcript protein	31	0.81
60	SSB_COREF (Q8FLP9) Single-stranded DNA-binding protein (SSB) (He...	30	1.1
61	MSA2_PLAF1 (P50496) Merozoite surface antigen 2 precursor (MSA-2)	30	1.1
62	FBSH_HUMAN (Q9HAH7) Probable fibrosin-1 long transcript protein	30	1.1
63	YI94_SCHPO (Q9UT55) Protein C806.04c	30	1.1
64	MCM3A_HUMAN (O60318) 80 kda MCM3-associated protein (GANP protein)	30	1.1
65	SMBT2_MOUSE (Q5DTW2) Scm-like with four MBT domains protein 2	30	1.4
66	NG79_SCHPO (Q09793) Putative nucleoporin C22G7.09c	30	1.4
67	ZN703_HUMAN (Q9H7S9) Zinc finger protein 703	30	1.4
68	WSC2_YEAST (P53832) Cell wall integrity and stress response comp...	30	1.4
69	PRY1_YEAST (P47032) Protein PRY1 precursor (Pathogen related in ...	30	1.4
70	GUN1_USTMA (P54424) Endoglucanase 1 precursor (EC 3.2.1.4) (Endo...	30	1.4
71	ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arab...	30	1.4
72	EP15_HUMAN (P42566) Epidermal growth factor receptor substrate 1...	30	1.4
73	NU159_YEAST (P40477) Nucleoporin NUP159 (Nuclear pore protein NU...	30	1.4
74	MUC13_RAT (P97881) Mucin-13 precursor	30	1.8
75	FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal bo...	30	1.8
76	NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucle...	30	1.8
77	API_ACHLY (P15636) Protease 1 precursor (EC 3.4.21.50) (Protease...	30	1.8
78	HRPA1_XANCV (P80151) Hypersensitivity response secretion protein...	30	1.8
79	HRBL_HUMAN (O95081) HIV-1 Rev-binding protein-like protein (Rev/...	29	2.4
80	PUM2_HUMAN (Q8TB72) Pumilio homolog 2 (Pumilio-2)	29	2.4
81	NUPL2_PONPY (Q5RB98) Nucleoporin-like 2	29	2.4
82	NUPL2_HUMAN (O15504) Nucleoporin-like 2 (NLP-1) (hCG1) (NUP42 ho...	29	2.4
83	HMB1_STRPU (P13545) Homeobox protein HB1 (SPHBOX1)	29	2.4
84	FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal bo...	29	2.4
85	K2C6C_HUMAN (P48666) Keratin, type II cytoskeletal 6C (Cytokerat...	29	2.4
86	EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 1...	29	2.4
87	NUP1_YEAST (P20676) Nucleoporin NUP1 (Nuclear pore protein NUP1)	29	2.4
88	CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-)	29	3.1
89	EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi	29	3.1
90	PYRD_HALMA (Q5UYF1) Dihydroorotate dehydrogenase (EC 1.3.3.1) (D...	29	3.1
91	EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate ...	29	3.1
92	PHXR5_MOUSE (P08399) Per-hexamer repeat protein 5	29	3.1
93	SP96_DICDI (P14328) Spore coat protein SP96	29	3.1
94	PUM1_HUMAN (Q14671) Pumilio homolog 1 (Pumilio-1) (HsPUM)	29	3.1
95	WSC4_YEAST (P38739) Cell wall integrity and stress response comp...	29	3.1
96	DPOL_ASFL6 (P43139) DNA polymerase (EC 2.7.7.7)	28	4.0
97	MUCSM_CANFA (P83762) Submaxillary mucin (CSM) (Fragment)	28	4.0
98	K1C3_XENLA (P05782) Keratin, type I cytoskeletal 47 kDa (Fragment)	28	4.0
99	P53_MOUSE (P02340) Cellular tumor antigen p53 (Tumor suppressor ...	28	4.0
100	ILF3_MOUSE (Q9Z1X4) Interleukin enhancer-binding factor 3	28	4.0
101	CPO_DROME (Q01617) Protein couch potato	28	4.0
102	SSB_BACAN (Q81JI3) Single-stranded DNA-binding protein (SSB) (He...	28	4.0
103	DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (...	28	4.0
104	MUCS_BOVIN (P98091) Submaxillary mucin-like protein	28	4.0
105	KAPR_TRIAT (Q86ZN7) cAMP-dependent protein kinase regulatory sub...	28	4.0
106	PUM1_MOUSE (Q80U78) Pumilio homolog 1	28	4.0
107	P2RX1_MOUSE (P51576) P2X purinoceptor 1 (ATP receptor) (P2X1) (P...	28	4.0
108	MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosi...	28	5.3
109	YCFD_SCHPO (O94725) Protein C1393.13	28	5.3
110	C3G_DROME (O77086) Guanine nucleotide-releasing factor 2 (CRK SH...	28	5.3
111	CDSN_MACMU (Q5TM45) Corneodesmosin precursor	28	5.3
112	GSPD_XANCP (P29041) General secretion pathway protein D precursor	28	5.3
113	DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)	28	6.9
114	PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101	28	6.9
115	KRHB4_MOUSE (Q99M73) Keratin, type II cuticular Hb4 (Hair kerati...	28	6.9
116	DZIP1_BRARE (Q7T019) Zinc finger protein Dzip1 (DAZ-interacting ...	28	6.9
117	PYRD_PYRKO (Q5JHR7) Dihydroorotate dehydrogenase (EC 1.3.3.1) (D...	28	6.9
118	NUPL2_CHICK (Q5ZI22) Nucleoporin-like 2	28	6.9
119	IASPP_MOUSE (Q5I1X5) RelA-associated inhibitor (Inhibitor of ASP...	28	6.9
120	SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)	28	6.9
121	HANG_DROME (Q9VXG1) Zinc finger protein hangover	28	6.9
122	CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog	28	6.9
123	YES_XIPHE (P27447) Tyrosine-protein kinase Yes (EC 2.7.10.2) (p6...	28	6.9
124	GAR1_CANGA (Q6FSB0) H/ACA ribonucleoprotein complex subunit 1 (s...	28	6.9
125	P2RX1_RAT (P47824) P2X purinoceptor 1 (ATP receptor) (P2X1) (Pur...	28	6.9
126	PGCA_RAT (P07897) Aggrecan core protein precursor (Cartilage-spe...	27	9.0
127	VLPC_MYCHR (P29230) Variant surface antigen C precursor (VLPC pr...	27	9.0
128	TODE_PSEPU (P13453) 3-methylcatechol 2,3-dioxygenase (EC 1.13.11.-)	27	9.0
129	SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-rel...	27	9.0
130	PYRD_ASHGO (Q75CE1) Dihydroorotate dehydrogenase, mitochondrial ...	27	9.0
131	GSPD2_DICD3 (Q01565) General secretion pathway protein D precurs...	27	9.0
132	VGLX_EHV1B (P28968) Glycoprotein X precursor	27	9.0
133	PYRD_DROME (P32748) Dihydroorotate dehydrogenase, mitochondrial ...	27	9.0
134	P53_MACMU (P56424) Cellular tumor antigen p53 (Tumor suppressor ...	27	9.0
135	P53_MACFU (P61260) Cellular tumor antigen p53 (Tumor suppressor ...	27	9.0
136	P53_MACFA (P56423) Cellular tumor antigen p53 (Tumor suppressor ...	27	9.0
137	P53_CERAE (P13481) Cellular tumor antigen p53 (Tumor suppressor ...	27	9.0
138	PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-s...	27	9.0
139	C28A5_DROME (Q9V419) Probable cytochrome P450 28a5 (EC 1.14.-.-)...	27	9.0
140	MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich pro...	27	9.0
141	K2C6E_HUMAN (P48668) Keratin, type II cytoskeletal 6E (Cytokerat...	27	9.0
142	K2C6B_HUMAN (P04259) Keratin, type II cytoskeletal 6B (Cytokerat...	27	9.0
143	K2C6A_HUMAN (P02538) Keratin, type II cytoskeletal 6A (Cytokerat...	27	9.0
144	IF2_STRAW (Q82K53) Translation initiation factor IF-2	27	9.0
145	KAPR_NEUCR (Q01386) cAMP-dependent protein kinase regulatory sub...	27	9.0
146	NUPL2_MOUSE (Q8CIC2) Nucleoporin-like 2 (NLP-1)	27	9.0

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>NUP42_YEAST (P49686) Nucleoporin NUP42 (Nuclear pore protein NUP42)|
          Length = 430

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 15/83 (18%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSS----NPFGAQSGFGQTS-------TATNPFGSPT---TAFGA 274
           +T   G +S SAFG TS+    + FGA + FG ++       + T+ FG+P+   T FGA
Sbjct: 68  NTGNTGNTSISAFGNTSNAAKPSAFGAPA-FGSSAPINVNPPSTTSAFGAPSFGSTGFGA 126

Query: 275 QTGTTSPFGATSSTAG-AFGQPS 340
              T++PFG +  + G AFGQP+
Sbjct: 127 MAATSNPFGKSPGSMGSAFGQPA 149



 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQSGFGQ--------TSTATNPFGSPTTAFGAQTGTTSPFGATSS 313
           S+ SAFG  S+ P    S FG          S+ ++ FG PT  FGA T T SPFG   +
Sbjct: 165 SNNSAFGAASNTPLTTTSPFGSLQQNASQNASSTSSAFGKPT--FGAATNTQSPFGTIQN 222

Query: 314 TAGAFGQPSAP 346
           T+ + G   +P
Sbjct: 223 TSTSSGTGVSP 233



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 15/86 (17%)
 Frame = +2

Query: 128 MFGSTNPFGQ---SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG----T 286
           M  ++NPFG+   S  SAFGQ +   FGA      +S+ +N   S  +AFGA +     T
Sbjct: 127 MAATSNPFGKSPGSMGSAFGQPA---FGANKTAIPSSSVSN---SNNSAFGAASNTPLTT 180

Query: 287 TSPFGA--------TSSTAGAFGQPS 340
           TSPFG+         SST+ AFG+P+
Sbjct: 181 TSPFGSLQQNASQNASSTSSAFGKPT 206



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 15/82 (18%)
 Frame = +2

Query: 137 STNPFG--QSSASAFGQTSSNPFGAQSGFGQTSTATNPFG-------------SPTTAFG 271
           +T+PFG  Q +AS    ++S+ FG  + FG  +   +PFG             SP   FG
Sbjct: 180 TTSPFGSLQQNASQNASSTSSAFGKPT-FGAATNTQSPFGTIQNTSTSSGTGVSPFGTFG 238

Query: 272 AQTGTTSPFGATSSTAGAFGQP 337
             +   SPF    S AGA   P
Sbjct: 239 TNSNNKSPFSNLQSGAGAGSSP 260



 Score = 36.2 bits (82), Expect = 0.019
 Identities = 33/90 (36%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
 Frame = +2

Query: 131 FGSTNPF-GQSSASAFGQTSSNPFGAQSG---------FGQTSTATNP--FGSPTTAFGA 274
           FG+ N   G ++ SAFG      FG  +G         FG TS A  P  FG+P  AFG+
Sbjct: 45  FGTANTMTGGTTTSAFGMPQ---FGTNTGNTGNTSISAFGNTSNAAKPSAFGAP--AFGS 99

Query: 275 QT-------GTTSPFGATSSTAGAFGQPSA 343
                     TTS FGA S  +  FG  +A
Sbjct: 100 SAPINVNPPSTTSAFGAPSFGSTGFGAMAA 129



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 14/77 (18%)
 Frame = +2

Query: 152 GQSSASAFGQTSSN--PFG-AQSGFGQTSTATNPFGSPT-----------TAFGAQTGTT 289
           G S    FG  S+N  PF   QSG G  S+   PFG+ T           +AFG  T   
Sbjct: 230 GVSPFGTFGTNSNNKSPFSNLQSGAGAGSS---PFGTTTSKANNNNNVGSSAFGT-TNNQ 285

Query: 290 SPFGATSSTAGAFGQPS 340
           SPF  +  + G FG  S
Sbjct: 286 SPF--SGGSGGTFGSAS 300

---

>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)|
          Length = 518

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQT-----GTTSPFG 301
           S+ P+GQ S S +GQ++       SG+GQ+S  ++   +  T +G Q+     G+T  +G
Sbjct: 29  SSQPYGQQSYSGYGQSADT-----SGYGQSSYGSSYGQTQNTGYGTQSAPQGYGSTGGYG 83

Query: 302 ATSSTAGAFGQPSA 343
           ++ S+  ++GQ S+
Sbjct: 84  SSQSSQSSYGQQSS 97



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +2

Query: 131 FGSTNPFG--QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 304
           +GST  +G  QSS S++GQ SS P     G+GQ         +P++  G+  G++     
Sbjct: 76  YGSTGGYGSSQSSQSSYGQQSSYP-----GYGQQP-------APSSTSGSYGGSSQSSSY 123

Query: 305 TSSTAGAFGQPS 340
               +G +GQ S
Sbjct: 124 GQPQSGGYGQQS 135



 Score = 31.2 bits (69), Expect = 0.62
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFG---QTSTATNPFGSPTTAFGAQTG-TTSPFGATSSTA 319
           G S +S++GQ  S  +G QSG+G   Q+        +P   +G Q    +S  G      
Sbjct: 116 GSSQSSSYGQPQSGGYGQQSGYGGQQQSYGQQQSSYNPPQGYGQQNQYNSSSGGGGGGGG 175

Query: 320 GAFGQ 334
           G +GQ
Sbjct: 176 GNYGQ 180

---

>NUP98_RAT (P49793) Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98|
           kDa nucleoporin)
          Length = 937

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 27/67 (40%), Positives = 36/67 (53%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 310
           FG+T+ FGQ++   FG TS   FG  S FG +S     FG+  T  G   GT+S     +
Sbjct: 16  FGTTSTFGQNTG--FGTTSGGAFGT-SAFGSSSNTGGLFGNSQTKPGGLFGTSSLSQPAT 72

Query: 311 STAGAFG 331
           ST+  FG
Sbjct: 73  STSTGFG 79



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 24/53 (45%), Positives = 30/53 (56%)
 Frame = +2

Query: 173 FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 331
           F ++   PFG   GFG TST     G  TT+ GA    TS FG++S+T G FG
Sbjct: 2   FNKSFGTPFGGTGGFGTTSTFGQNTGFGTTSGGA--FGTSAFGSSSNTGGLFG 52



 Score = 36.2 bits (82), Expect = 0.019
 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFG----QTSSNPFGAQSGFGQTSTAT------NPFGSPTTAFGAQT 280
           FG+T+  GQ S +  G      +S P G       TST T        FG P T FGA  
Sbjct: 301 FGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAVG 360

Query: 281 GT------TSPFGATSSTAGAFGQPS 340
            T       + FG ++++A +FG  S
Sbjct: 361 STLFGNNKLTTFGTSTTSAPSFGTTS 386



 Score = 34.7 bits (78), Expect = 0.056
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 18/82 (21%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFG-------AQSGFGQTSTATNPFGSPTTAF-----------GA 274
           FG SS S    ++S  FG       + S FG  +T T+ F S   AF           G 
Sbjct: 62  FGTSSLSQPATSTSTGFGFGTSTGTSNSLFGTANTGTSLFSSQNNAFAQNKPTGFGNFGT 121

Query: 275 QTGTTSPFGATSSTAGAFGQPS 340
            T +   FG T++T+  FG  S
Sbjct: 122 STSSGGLFGTTNTTSNPFGNTS 143



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 19/87 (21%)
 Frame = +2

Query: 128 MFGSTN--PFGQSSASA--FGQTSSNPFG-------------AQSGFGQTSTATNPFGSP 256
           +FG+     FG S+ SA  FG TS   FG             +  GFG  ++ ++ FGS 
Sbjct: 363 LFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNNSGSSIFGSK 422

Query: 257 TTAFGAQTGTTSPFGAT--SSTAGAFG 331
             A    TG  + FG    +  A  FG
Sbjct: 423 PAAGTLGTGLGTGFGTALGAGQASLFG 449

---

>NUPL_HUMAN (P52594) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)|
           (Rev-interacting protein) (Rev/Rex activation
           domain-binding protein)
          Length = 562

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 21/120 (17%)
 Frame = +2

Query: 50  AAVDPILXXXXXXXXXXXXXXXXXXXMFGS--------TNPFGQSSASAFGQT-SSNPFG 202
           A +D +                    +FG+        T P   S  + FG T S+NPF 
Sbjct: 378 AELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPASSSVPAPFGATPSTNPFV 437

Query: 203 AQSGFGQTSTATNPF-----GSPTTAFGAQT-------GTTSPFGATSSTAGAFGQPSAP 346
           A +G    +++TNPF     G+    FG  +       GT +P+   +S +G+F QP+ P
Sbjct: 438 AAAG-PSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPYSLPTSFSGSFQQPAFP 496



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 7/46 (15%)
 Frame = +2

Query: 131 FGSTNP----FGQSSASAFGQTSSNPF--GAQSG-FGQTSTATNPF 247
           FG T P    FGQ +A+     SSNPF  GA +G F   S++TNPF
Sbjct: 519 FGQTKPVVTPFGQVAAAG---VSSNPFMTGAPTGQFPTGSSSTNPF 561



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNP-FGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGA 304
           FG+  P+  S  ++F  +   P F AQ+ F Q T+ +  P G+   AFG      +PFG 
Sbjct: 474 FGTPAPY--SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQ 531

Query: 305 TSSTAGAFGQP 337
            ++ AG    P
Sbjct: 532 VAA-AGVSSNP 541

---

>NUPL_BOVIN (Q2TA45) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein|
           homolog)
          Length = 562

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 21/120 (17%)
 Frame = +2

Query: 50  AAVDPILXXXXXXXXXXXXXXXXXXXMFGS--------TNPFGQSSASAFGQT-SSNPFG 202
           A +D +                    +FG+        T P   S  + FG T S+NPF 
Sbjct: 378 AELDSVFSSAATSSNAYTSTSNASSNVFGTVPVGASAQTQPASSSVPAPFGATPSTNPFV 437

Query: 203 AQSGFGQTSTATNPF-----GSPTTAFGAQT-------GTTSPFGATSSTAGAFGQPSAP 346
           A +G    +++TNPF     G+    FG  +       GT +P+   +S +G+F QP+ P
Sbjct: 438 AAAG-PSVASSTNPFQTNARGATAATFGTASMSMPAGFGTPAPYSLPTSFSGSFQQPAFP 496



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNP-FGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGA 304
           FG+  P+  S  ++F  +   P F AQ+ F Q T+ +  P G+   AFG      +PFG 
Sbjct: 474 FGTPAPY--SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFG- 530

Query: 305 TSSTAGAFGQPSAP 346
                GA G  S P
Sbjct: 531 ---QVGAAGVSSNP 541



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
 Frame = +2

Query: 131 FGSTNP----FGQSSASAFGQTSSNPF--GAQSG-FGQTSTATNPF 247
           FG T P    FGQ  A+     SSNPF  GA +G F   S++TNPF
Sbjct: 519 FGQTKPVVTPFGQVGAAG---VSSNPFMTGAPTGQFPTGSSSTNPF 561

---

>NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nup189)|
          Length = 1778

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
 Frame = +2

Query: 128 MFGSTNPFGQSSASAFGQTSSNPFGAQSG---FGQTSTATNP-----FGSPTTAFGAQTG 283
           +FG+ N    +  + FG +S      QS    FG T+ ATNP     FGS T    A TG
Sbjct: 67  LFGNRNNTTTTGGTGFGMSSGTGMFGQSNTPAFGGTNNATNPSGGGLFGSNTANNNANTG 126

Query: 284 TTSPFGATSSTAG 322
           T+  FG+ + + G
Sbjct: 127 TSFSFGSNAGSTG 139



 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +2

Query: 128 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT-AFGAQTGTTSPFGA 304
           M   T  FGQS+  AFG T++    +  G   ++TA N   + T+ +FG+  G+T  FG+
Sbjct: 84  MSSGTGMFGQSNTPAFGGTNNATNPSGGGLFGSNTANNNANTGTSFSFGSNAGSTG-FGS 142

Query: 305 TSSTAGAFGQPSAP 346
             +  G FG  + P
Sbjct: 143 QGTGGGLFGSSTTP 156



 Score = 35.8 bits (81), Expect = 0.025
 Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 24/97 (24%)
 Frame = +2

Query: 128 MFGSTNPFGQSSAS-AFGQTSSNP---FGAQSG------FGQTSTATNPFGSPTT----- 262
           MFG  N  G    + AFGQ +      FG+ S       FG  +T+T  FG  TT     
Sbjct: 1   MFGQNNSSGFGGGTGAFGQNNQQTGGLFGSNSNTPGNTLFGSQNTSTTGFGQNTTQPLFG 60

Query: 263 ------AFGAQTGTTSPFG---ATSSTAGAFGQPSAP 346
                  FG +  TT+  G     SS  G FGQ + P
Sbjct: 61  SNTNGGLFGNRNNTTTTGGTGFGMSSGTGMFGQSNTP 97



 Score = 34.7 bits (78), Expect = 0.056
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
 Frame = +2

Query: 128 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFG--------QTSTATNPFGSPTTAFGAQTG 283
           MFGS N         FG T +N   + +G G         T+T  + F  P+T  G   G
Sbjct: 527 MFGSANS-STPGTGLFGSTQTNNATSNTGTGLFGSNNANTTNTGGSLFNKPSTTTGGLFG 585

Query: 284 TTSPFGATSSTAGAFG 331
            T+    +++T+G FG
Sbjct: 586 NTTAQQPSTTTSGLFG 601



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 22/86 (25%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNP--------------------FGAQSGFGQTSTATNPFG 250
           FGST     S   +FGQ ++N                     FG       T+TATN  G
Sbjct: 452 FGSTTTTPASGGFSFGQNANNAPKPAFGSTATTAPKPAGTGLFGGLGAGANTNTATNATG 511

Query: 251 SPTTAFG-AQTGTTSPFG-ATSSTAG 322
           +  + FG A T  ++ FG A SST G
Sbjct: 512 TGGSLFGNANTAGSNMFGSANSSTPG 537



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
 Frame = +2

Query: 140 TNPFGQSSASAFGQTSSNPFGAQ-SGFGQTSTATNP------FG-----SPTTAFGAQTG 283
           T+ FG +++S F   ++N    + SGFG  ST T P      FG     +P  AFG+ T 
Sbjct: 424 TSTFGGNNSSNFSFGANNNAATKPSGFGFGSTTTTPASGGFSFGQNANNAPKPAFGS-TA 482

Query: 284 TTSPFGATSSTAGAFG 331
           TT+P  A +   G  G
Sbjct: 483 TTAPKPAGTGLFGGLG 498



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQTSSNPFGAQS------GFGQTSTATNPFGSPTTAFGAQTGTTSP 295
           G+   FG SS   FG  ++N   + +      GFG  +   N   +PT+ FG    +   
Sbjct: 378 GTGTGFG-SSTGGFGSNTNNQPNSGTMGTGLFGFGANNNTANNNTAPTSTFGGNNSSNFS 436

Query: 296 FGATSSTA 319
           FGA ++ A
Sbjct: 437 FGANNNAA 444



 Score = 32.0 bits (71), Expect = 0.36
 Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
 Frame = +2

Query: 137 STNPFGQS------SASAFGQTS-------SNPFGAQSGFGQTSTATNPFGSPT-TAFGA 274
           ST PFGQ+      +A+ FG ++       S  FG  S FG  +T T  FGS T  A G 
Sbjct: 248 STTPFGQNLSGTTNNATPFGTSNATNTTPGSGLFGGGSAFGSNTTNTG-FGSGTNNASGG 306

Query: 275 QTGTTSPFGATSSTAGAFG 331
             G  +   +T ST G FG
Sbjct: 307 LFGQNNNTTSTPST-GLFG 324



 Score = 31.6 bits (70), Expect = 0.48
 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 19/91 (20%)
 Frame = +2

Query: 128 MFGSTNPFGQSSASAFGQTSSNP-FGAQS-----------------GFGQTSTATNPFG- 250
           +FGS N    +S + FGQ ++ P FG+ +                 GFG +S  T  FG 
Sbjct: 39  LFGSQN----TSTTGFGQNTTQPLFGSNTNGGLFGNRNNTTTTGGTGFGMSS-GTGMFGQ 93

Query: 251 SPTTAFGAQTGTTSPFGATSSTAGAFGQPSA 343
           S T AFG     T+P G      G FG  +A
Sbjct: 94  SNTPAFGGTNNATNPSG-----GGLFGSNTA 119



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQ---TSSNP----FGAQSGFGQTSTATNPFGSPTTAFGAQTGTT 289
           FGS      +S   FGQ   T+S P    FG  S F Q   A + FGS T      TG T
Sbjct: 296 FGSGT--NNASGGLFGQNNNTTSTPSTGLFGG-STFNQQKPAFSGFGSTTNTTNTGTG-T 351

Query: 290 SPFGATSSTAGAFGQ 334
             FG+ ++T    GQ
Sbjct: 352 GLFGSNNATNTGTGQ 366



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST----- 316
           G+   +A    +++ FG+   FG    +T PFG         T   +PFG +++T     
Sbjct: 224 GRRFGNASSTNTTSAFGSTPAFG---ASTTPFGQ---NLSGTTNNATPFGTSNATNTTPG 277

Query: 317 AGAFGQPSA 343
           +G FG  SA
Sbjct: 278 SGLFGGGSA 286



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
 Frame = +2

Query: 128 MFGST---NPFGQSSASAFGQTSSNPFGAQSG-FGQTSTATNPFGSPTTAFGAQTGTTSP 295
           +FGST   N    +    FG  ++N        F + ST T      TTA    T T+  
Sbjct: 540 LFGSTQTNNATSNTGTGLFGSNNANTTNTGGSLFNKPSTTTGGLFGNTTAQQPSTTTSGL 599

Query: 296 FGATSS 313
           FGA+++
Sbjct: 600 FGASNT 605

---

>NUP98_HUMAN (P52948) Nuclear pore complex protein Nup98-Nup96 precursor|
           [Contains: Nuclear pore complex protein Nup98
           (Nucleoporin Nup98) (98 kDa nucleoporin); Nuclear pore
           complex protein Nup96 (Nucleoporin Nup96) (96 kDa
           nucleoporin)]
          Length = 1729

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 26/67 (38%), Positives = 36/67 (53%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 310
           FG+T+ FGQ++   FG TS   FG  S FG ++     FG+  T  G   GT+S     +
Sbjct: 17  FGTTSTFGQNTG--FGTTSGGAFGT-SAFGSSNNTGGLFGNSQTKPGGLFGTSSFSQPAT 73

Query: 311 STAGAFG 331
           ST+  FG
Sbjct: 74  STSTGFG 80



 Score = 37.4 bits (85), Expect = 0.009
 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
 Frame = +2

Query: 143 NPFGQSSASAFGQ--TSSNPFGAQSGFGQTSTATNPFGSPT-TAFGAQTGTTSPFGAT 307
           N F Q+  + FG   TS++  G    FG T+T +NPFGS + + FG  + T +P G T
Sbjct: 107 NAFAQNKPTGFGNFGTSTSSGGL---FGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTT 161



 Score = 36.6 bits (83), Expect = 0.015
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
 Frame = +2

Query: 128 MFGS--TNPFGQSSASAFGQTSSNP-----FGAQSG-----FGQTSTATNPFGSPTTAF- 268
           +FG+  T P G    S+F Q +++      FG  +G     FG  ST T+ F S   AF 
Sbjct: 51  LFGNSQTKPGGLFGTSSFSQPATSTSTGFGFGTSTGTANTLFGTASTGTSLFSSQNNAFA 110

Query: 269 ----------GAQTGTTSPFGATSSTAGAFGQPS 340
                     G  T +   FG T++T+  FG  S
Sbjct: 111 QNKPTGFGNFGTSTSSGGLFGTTNTTSNPFGSTS 144



 Score = 36.6 bits (83), Expect = 0.015
 Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +2

Query: 173 FGQTSSNPFGAQSG-FGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 331
           F ++   PFG  +G FG TST     G  TT+ GA    TS FG++++T G FG
Sbjct: 2   FNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGA--FGTSAFGSSNNTGGLFG 53



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +2

Query: 131 FGSTNPFGQSSASA---FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG 301
           FG+T+  GQ S +    FG T ++  G   G    ++    FG+ T  FG    T + FG
Sbjct: 302 FGNTSTIGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQ---TNTGFG 358

Query: 302 ATSST 316
           A  ST
Sbjct: 359 AVGST 363



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 19/87 (21%)
 Frame = +2

Query: 128 MFGSTN--PFGQSSASA--FGQTSSNPFG-------------AQSGFGQTSTATNPFGSP 256
           +FG+     FG S+ SA  FG TS   FG             +  GFG  ++  + FGS 
Sbjct: 364 LFGNNKLTTFGSSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGNSIFGSK 423

Query: 257 TTAFGAQTGTTSPFGAT--SSTAGAFG 331
                  TG  + FG    +  A  FG
Sbjct: 424 PAPGTLGTGLGAGFGTALGAGQASLFG 450

---

>NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58|
          Length = 546

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
 Frame = +2

Query: 137 STNPFGQSSAS-AFGQTSSNP-FGAQSGFGQTSTATNPFGSP--TTAFGAQTGTTSPFGA 304
           +T+ FG  +A+ AFG  ++ P FGA +       AT  FG+P  T+AFGA   TT+ FGA
Sbjct: 106 ATSAFGAPAATPAFGAAAATPAFGAPA-------ATPAFGAPAATSAFGAPAATTA-FGA 157

Query: 305 TSST-AGAFGQPS 340
            +ST A AFG P+
Sbjct: 158 PASTQASAFGAPA 170



 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
 Frame = +2

Query: 137 STNPFGQSSAS-AFGQTSSNP-FGAQS----GFGQTSTATNPFGSP--TTAFGAQTGTTS 292
           +T  FG  +A+ AFG  +S P FGA S     FG T+ AT  FG P  T+AFGA   T +
Sbjct: 60  ATPAFGAPAATPAFGAPASTPGFGATSTAAPAFG-TAAATPAFGIPAATSAFGAPAATPA 118

Query: 293 PFGATSSTAGAFGQPSA 343
            FGA ++T  AFG P+A
Sbjct: 119 -FGAAAATP-AFGAPAA 133



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNP-FGSPTTA--FGAQTGTTSPFGAT 307
           + N  G ++A+    T +  FGA+     T+TA  P FG+ T+   FGA   TTS F A 
Sbjct: 6   TNNAIGGATAA----TGAFAFGARPA---TTTAPPPSFGAATSTPTFGAAPATTSLFAAP 58

Query: 308 SSTAGAFGQPSA 343
           ++T  AFG P+A
Sbjct: 59  AATP-AFGAPAA 69



 Score = 30.8 bits (68), Expect = 0.81
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
 Frame = +2

Query: 137 STNPFGQSSAS-AFG---QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 304
           +T+ FG  +A+ AFG    T ++ FGA +    T   T  F +P T+          FG 
Sbjct: 142 ATSAFGAPAATTAFGAPASTQASAFGAPAPAVGTVAPTFSFATPATSAPTTAPPAFGFGT 201

Query: 305 TSSTAGA 325
           T++TA A
Sbjct: 202 TATTAAA 208



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQ 334
           + A AFG   +        FG  TST T      TT+  A    T  FGA ++T  AFG 
Sbjct: 17  TGAFAFGARPATTTAPPPSFGAATSTPTFGAAPATTSLFAAPAATPAFGAPAATP-AFGA 75

Query: 335 PSA 343
           P++
Sbjct: 76  PAS 78

---

>YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I|
          Length = 598

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
 Frame = +2

Query: 134 GSTNPFGQSS----ASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG 301
           GS N  G  S    +SA G  ++NP G+   FG ++ + N FG P +     T TT+P  
Sbjct: 112 GSANSTGDKSKNTASSATGAATTNPSGSTFNFGSSNNSFN-FGKPAST----TNTTTP-- 164

Query: 302 ATSSTAGAFGQPSA 343
           A +ST   FG+P+A
Sbjct: 165 AAASTGSLFGKPAA 178



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQTSSN-PFGAQ---SGFGQTSTATNPFGSPTTAFGAQTG--TTSP 295
           G++     SS  +FG T++N   GA+    G G T +A +          + TG  TT+P
Sbjct: 77  GNSTNASTSSPFSFGSTNTNNTAGAKPLFGGLGSTGSANSTGDKSKNTASSATGAATTNP 136

Query: 296 FGAT-----SSTAGAFGQPSA 343
            G+T     S+ +  FG+P++
Sbjct: 137 SGSTFNFGSSNNSFNFGKPAS 157



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 13/79 (16%)
 Frame = +2

Query: 128 MFGSTNP-----------FGQSSASAFGQTSSNPFG--AQSGFGQTSTATNPFGSPTTAF 268
           +FG+TN            FG ++AS     S+  FG  A +G    ++ ++PF   +T  
Sbjct: 36  LFGNTNNNTSSTAPSGGLFGSNNASNTSAPSTFSFGKAATTGNSTNASTSSPFSFGSTNT 95

Query: 269 GAQTGTTSPFGATSSTAGA 325
               G    FG   ST  A
Sbjct: 96  NNTAGAKPLFGGLGSTGSA 114



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAF--GQTSSNPFGAQSGFGQTSTA--TNPFGSPTTAF---GAQTGTT 289
           F    P GQ++++A   G T+++  G    FG+ +T   TN   +P +AF      TG  
Sbjct: 270 FSFGKPAGQAASTATDKGTTTTSSAGTGFSFGKPATTEDTNKPTAPNSAFTKPATSTGDN 329

Query: 290 SP---FGATS 310
            P   FG TS
Sbjct: 330 KPTFSFGNTS 339



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQ-----TSSN--PFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 295
           +T P   S+ S FG+     T+SN  P  + S    T +    FG P +       +TS 
Sbjct: 161 TTTPAAASTGSLFGKPAATGTTSNAPPASSTSTTPATGSGGFSFGKPASLGSTNNASTS- 219

Query: 296 FGATSSTAGAFGQPS 340
              T+++  +FG+P+
Sbjct: 220 --TTANSGFSFGKPA 232

---

>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore|
            membrane protein of 121 kDa)
          Length = 1200

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 13/76 (17%)
 Frame = +2

Query: 131  FGSTNPFGQSSASA---------FGQTSSNPFG----AQSGFGQTSTATNPFGSPTTAFG 271
            FGS+  FG S ASA         FG  +   FG    A S FG  ++    FGS T+ F 
Sbjct: 952  FGSSFTFGNSVASAPSAAPAPATFGSAAQPAFGGLKAAASTFGAPASTQPAFGSTTSVFS 1011

Query: 272  AQTGTTSPFGATSSTA 319
              + TTS FGA ++ A
Sbjct: 1012 FGSATTSGFGAAATAA 1027



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 137  STNPFGQSS-ASAFGQTSSN-PFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 295
            ST  FGQS+ A   G T S+  FGA S   Q      PFGS   +F    G+ +P
Sbjct: 1130 STPTFGQSAPAPGVGTTGSSLSFGASSTPAQGFVGVGPFGSAAPSFSIGAGSKTP 1184



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = +2

Query: 131  FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQT-------GTT 289
            FGST     +S  +FG  +++ FGA +    T+  TN  GS ++ FG+         G+ 
Sbjct: 1003 FGST-----TSVFSFGSATTSGFGAAATAATTTQTTNS-GSSSSLFGSSAPSPFTFGGSA 1056

Query: 290  SPFGA----------TSSTAGAF----GQPSAP 346
            +P G+          TSST+G F    GQ   P
Sbjct: 1057 APAGSGGFGLSATPGTSSTSGTFSFGSGQSGTP 1089



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 17/83 (20%)
 Frame = +2

Query: 131  FGSTNPFGQSSASAFGQTSSNPFGAQSG-----------------FGQTSTATNPFGSPT 259
            FGS       + ++FG  S N  GA S                  FG TST T    +P 
Sbjct: 1081 FGSGQSGTPGTTTSFGSLSQNTLGAPSQGSPFAFSVGSTPESKPVFGGTSTPTFGQSAPA 1140

Query: 260  TAFGAQTGTTSPFGATSSTAGAF 328
               G  TG++  FGA+S+ A  F
Sbjct: 1141 PGVGT-TGSSLSFGASSTPAQGF 1162



 Score = 32.0 bits (71), Expect = 0.36
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
 Frame = +2

Query: 149  FGQSSASAFG--QTSSNPFGA----QSGFGQTSTATNPFGSPTTA-FG--AQTGTTSPFG 301
            FG ++  AFG  + +++ FGA    Q  FG T T+   FGS TT+ FG  A   TT+   
Sbjct: 975  FGSAAQPAFGGLKAAASTFGAPASTQPAFGST-TSVFSFGSATTSGFGAAATAATTTQTT 1033

Query: 302  ATSSTAGAFGQPSAP 346
             + S++  FG  SAP
Sbjct: 1034 NSGSSSSLFGS-SAP 1047



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
 Frame = +2

Query: 131  FGSTNPFGQSSAS---AFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-- 295
            FG +   G SS S   +FG   S   G  + FG  S  T    S  + F    G+T    
Sbjct: 1064 FGLSATPGTSSTSGTFSFGSGQSGTPGTTTSFGSLSQNTLGAPSQGSPFAFSVGSTPESK 1123

Query: 296  --FGATSSTAGAFGQPSAP 346
              FG TS+    FGQ SAP
Sbjct: 1124 PVFGGTSTP--TFGQ-SAP 1139

---

>GLH4_CAEEL (O76743) ATP-dependent RNA helicase glh-4 (EC 3.6.1.-) (Germline|
           helicase 4)
          Length = 1156

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
 Frame = +2

Query: 140 TNPFGQSSASAFGQTSSNPFGA--QSGFG--QTSTATNPFGSPT--TAFGAQTGTTSPFG 301
           T  FG +S   FG  SS  FG+  ++GFG  + STA N  G PT  T FG +      FG
Sbjct: 406 TAGFGGASKPGFGGDSSTGFGSGLKAGFGGHRASTAENS-GLPTETTGFGGKLPPAG-FG 463

Query: 302 ATSSTAGAFGQPS 340
           A+SS   AFGQ S
Sbjct: 464 ASSSNESAFGQQS 476



 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQ-------SGF--GQTSTATNPFGSPTTAFGAQTGTT 289
           S++ FG  S + FG TSS+  G Q       SGF   +TST+   FGS    FG +  T+
Sbjct: 334 SSSSFGSGSKAGFGGTSSSGIGGQKPGATESSGFPTKETSTSGGTFGS---GFGGKP-TS 389

Query: 290 SPFGATSSTAGAFGQPSA 343
           + FGA S+T  + GQ +A
Sbjct: 390 TGFGAPSTTDSSSGQQTA 407



 Score = 35.4 bits (80), Expect = 0.033
 Identities = 23/64 (35%), Positives = 31/64 (48%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 328
           FG  S++ FG      FG   G G  +   +   + TT FG +  +   FGA+SS   AF
Sbjct: 260 FGGDSSTGFGSGLKAGFG---GHGAGAAENSGLPTETTGFGGKLPSAG-FGASSSNESAF 315

Query: 329 GQPS 340
           GQ S
Sbjct: 316 GQQS 319



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-FGATSSTAGA 325
           FG ++   FG +SS+ FG     GQ + AT   G PT     +T T+ P FG  SST   
Sbjct: 219 FGGAAKMGFGGSSSSGFG-----GQKAGATESSGFPT----KETSTSQPGFGGDSSTGFG 269

Query: 326 FG 331
            G
Sbjct: 270 SG 271



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 29/98 (29%)
 Frame = +2

Query: 137 STNPFGQSSASAFG------------QTSSNPFGAQ---SGFGQTSTATNPFGSPTTAFG 271
           S+  FG    + FG             T +  FG +   +GFG +S+  + FG  +  FG
Sbjct: 264 SSTGFGSGLKAGFGGHGAGAAENSGLPTETTGFGGKLPSAGFGASSSNESAFGQQSKGFG 323

Query: 272 AQT--------------GTTSPFGATSSTAGAFGQPSA 343
             T              G+ + FG TSS+     +P A
Sbjct: 324 GATKNGFGGDSSSSFGSGSKAGFGGTSSSGIGGQKPGA 361



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 20/87 (22%)
 Frame = +2

Query: 137 STNPFGQSSASAFG------------QTSSNPFGAQ---SGFGQTSTATNPFGSPTTAFG 271
           S+  FG    + FG             T +  FG +   +GFG +S+  + FG  +  FG
Sbjct: 421 SSTGFGSGLKAGFGGHRASTAENSGLPTETTGFGGKLPPAGFGASSSNESAFGQQSKGFG 480

Query: 272 AQTGTTSPFGATSSTA-----GAFGQP 337
               T + FG  SS +       FG P
Sbjct: 481 G--ATKNGFGGDSSNSFGKRDSGFGGP 505

---

>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)|
           (Translocated in liposarcoma protein) (POMp75) (75 kDa
           DNA-pairing protein)
          Length = 526

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
 Frame = +2

Query: 140 TNPFGQSSASAFGQTSSNPFGAQS---------GFGQTSTATNPFGSPTT--AFGAQTGT 286
           T+ +GQSS S++GQ+ +  +G QS         G+G + ++ + +G  ++   +G Q   
Sbjct: 47  TSGYGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAP 106

Query: 287 TSPFGA--TSSTAGAFGQPSA 343
           +S  G+  +SS + ++GQP +
Sbjct: 107 SSTSGSYGSSSQSSSYGQPQS 127

---

>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)|
          Length = 1159

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +2

Query: 128  MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGA 304
            MFG++ P   SSA AFG  S     A +GFG  T+TATN    P+T F     T +P  A
Sbjct: 1011 MFGTSTP-APSSAFAFGNQSGTNPAAPAGFGGITNTATN--NPPSTGF-----TFTPSNA 1062

Query: 305  TSSTAGAFGQPSAP 346
             S+ A  FG  + P
Sbjct: 1063 GSTAAPMFGAGNTP 1076

---

>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore|
            membrane protein of 121 kDa) (P145)
          Length = 1199

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
 Frame = +2

Query: 131  FGSTNPFGQSSASA---------FGQTSSNPFG----AQSGFGQTSTATNPFGSPTTAFG 271
            FGS+  FG S ASA         FG  +   FG    + S FG  ++    FGS T+ F 
Sbjct: 953  FGSSFTFGNSVASAPSAAPAPAAFGGAAQPAFGGLKASASTFGTPASTQPAFGSTTSVFS 1012

Query: 272  AQTGTTSPFGATSST 316
              + TTS FGA ++T
Sbjct: 1013 FGSATTSGFGAAAAT 1027



 Score = 35.4 bits (80), Expect = 0.033
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +2

Query: 131  FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 310
            FGST     +S  +FG  +++ FGA +   QT+ +    GS ++ FG+ T +   FG ++
Sbjct: 1004 FGST-----TSVFSFGSATTSGFGAAAATTQTTHS----GSSSSLFGSSTPSPFTFGGSA 1054

Query: 311  STA--GAFGQPSAP 346
            + A  G FG  + P
Sbjct: 1055 APAGGGGFGLSATP 1068



 Score = 35.4 bits (80), Expect = 0.033
 Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 16/82 (19%)
 Frame = +2

Query: 149  FGQSSASAFG------QTSSNPFGAQSGFGQTSTATNPFGSPTTA-FGAQTGTT------ 289
            FG ++  AFG       T   P   Q  FG T T+   FGS TT+ FGA   TT      
Sbjct: 976  FGGAAQPAFGGLKASASTFGTPASTQPAFGST-TSVFSFGSATTSGFGAAAATTQTTHSG 1034

Query: 290  ---SPFGATSSTAGAFGQPSAP 346
               S FG+++ +   FG  +AP
Sbjct: 1035 SSSSLFGSSTPSPFTFGGSAAP 1056



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
 Frame = +2

Query: 137  STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA----QTGTTSPFGA 304
            S++ FG S+ S F    S       GFG ++T      S T +FG+     TGTT+ FG 
Sbjct: 1036 SSSLFGSSTPSPFTFGGSAAPAGGGGFGLSATPGTGSTSGTFSFGSGQSGTTGTTTSFGG 1095

Query: 305  TSS--TAGAFGQPS 340
            + S  T GA  Q S
Sbjct: 1096 SLSQNTLGAPSQSS 1109



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 137  STNPFGQSS-ASAFGQTSSN-PFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 295
            ST  FGQS+ A   G T S+  FGA S   Q      PFGS   +F    G+ +P
Sbjct: 1129 STPTFGQSAPAPGVGTTGSSLSFGAPSTPAQGFVGVGPFGSGAPSFSIGAGSKTP 1183



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
 Frame = +2

Query: 128  MFGSTNP----FGQSSASA----FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG 283
            +FGS+ P    FG S+A A    FG +++   G+ SG     +  +     TT+FG    
Sbjct: 1039 LFGSSTPSPFTFGGSAAPAGGGGFGLSATPGTGSTSGTFSFGSGQSGTTGTTTSFGGSLS 1098

Query: 284  TTSPFGATSSTAGAFGQPSAP 346
              +    + S+  AF   S P
Sbjct: 1099 QNTLGAPSQSSPFAFSVGSTP 1119

---

>NUPL2_BRARE (Q6P0U9) Nucleoporin-like 2|
          Length = 414

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
 Frame = +2

Query: 131 FGSTNPF-------GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTT 289
           FGS + F       GQ S    G  SS+ FG+ SGFG +S   + FGS   A  +  G+T
Sbjct: 306 FGSASGFSFKTATAGQGSGFGSGFGSSSGFGSSSGFGSSSGFGSAFGSAAPAQSSSFGST 365

Query: 290 SPFGATSSTAGAF 328
                T S  G F
Sbjct: 366 GGAADTQSGHGLF 378



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 32/77 (41%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTS-SNP----FGAQSGFGQTSTATNPFGSPTTAFGA-QTGTTS 292
           FGS  P   S+ S FG TS S+P     GA  G G  S++T  F    T FGA  T   S
Sbjct: 207 FGSPGPGFGSATSGFGNTSLSSPPAGFGGAGFGSGPQSSSTFSFAQSKTDFGASNTQQAS 266

Query: 293 PFGATSSTAGAFGQPSA 343
            FG++     AF QPS+
Sbjct: 267 GFGSS-----AFAQPSS 278



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNP----FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 298
           FG+  P   S + A   + S P    FG+ SGF    TAT   GS    FG+  G++S F
Sbjct: 280 FGNPAPSAASFSFAAADSESKPSAGGFGSASGFS-FKTATAGQGS---GFGSGFGSSSGF 335

Query: 299 GATSSTAGAFGQPSA 343
           G++S    + G  SA
Sbjct: 336 GSSSGFGSSSGFGSA 350



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA--QTGTTSPFGATSSTAGA 325
           +SA  FG        A SGFG TS ++ P G     FG+  Q+ +T  F  + +  GA
Sbjct: 202 ASAPGFGSPGPGFGSATSGFGNTSLSSPPAGFGGAGFGSGPQSSSTFSFAQSKTDFGA 259



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFG-QTSSNPFGAQSGFGQTSTATNPFGSPTTAFG--AQTGTTSPFG 301
           FGS    G  S+S F    S   FGA +    +   ++ F  P++ FG  A +  +  F 
Sbjct: 238 FGS----GPQSSSTFSFAQSKTDFGASNTQQASGFGSSAFAQPSSGFGNPAPSAASFSFA 293

Query: 302 ATSS----TAGAFGQPS 340
           A  S    +AG FG  S
Sbjct: 294 AADSESKPSAGGFGSAS 310

---

>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 21/93 (22%)
 Frame = +2

Query: 131  FGSTNP--FGQSS---ASAFGQTSSNP----------FGAQSGFGQTSTATNPFGSPTTA 265
            FG+T P  FGQ++   AS FGQ++S+           F +   FGQ +++T P  +  + 
Sbjct: 1713 FGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASST-PTSTSGSV 1771

Query: 266  FGAQTGTTS----PFGATSSTAGA--FGQPSAP 346
            FGA + T+S     FG +S   G   FGQ +AP
Sbjct: 1772 FGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAP 1804



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 17/86 (19%)
 Frame = +2

Query: 137  STNPFGQSSASA----FGQTSSNPFGAQSGFGQ------------TSTATNPFGSPTTAF 268
            S+  FGQSS +     FGQ+++  FG   GFGQ            T+ AT+ F     + 
Sbjct: 1782 SSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASG 1841

Query: 269  GAQTGTTSPFGATSSTAG-AFGQPSA 343
               + T S FG  +ST G  FGQ S+
Sbjct: 1842 FGSSNTGSVFGQAASTGGIVFGQQSS 1867



 Score = 36.2 bits (82), Expect = 0.019
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
 Frame = +2

Query: 131  FGS----TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT----AFGAQTGT 286
            FGS    T+P G +    FG+ ++       GFG +S  T+ FG+  +     FG+ +  
Sbjct: 1994 FGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSSNTTS-FGTLASQNAPTFGSLSQQ 2052

Query: 287  TSPFGATSSTAGAFG 331
            TS FG  SS    FG
Sbjct: 2053 TSGFGTQSSGFSGFG 2067



 Score = 35.8 bits (81), Expect = 0.025
 Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 49/116 (42%)
 Frame = +2

Query: 131  FGST------NPFGQSSASAFGQTSSNPFGAQS---------------GFGQTST----- 232
            FGST      N FG S A  FG  +S+ FG Q                GFG +S      
Sbjct: 1910 FGSTATSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGSVASQGFGFSSPNKTGG 1969

Query: 233  --ATNPFGSPTT-----------AFGAQTGTTSPFGAT----------SSTAGAFG 331
              A   FGSP T           AFG+    TSP G+T          +++AG FG
Sbjct: 1970 FGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFG 2025



 Score = 33.9 bits (76), Expect = 0.096
 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +2

Query: 146  PFGQSSASAFGQTSSNPFGAQSG---FGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
            P   SS+SAF Q ++N   A S    FGQ + +T P     + FG QTG+T+      ST
Sbjct: 1648 PPAASSSSAFNQLTNNTATAPSATPVFGQVAASTAP-----SLFGQQTGSTA------ST 1696

Query: 317  AGAFGQPSA 343
            A A  Q S+
Sbjct: 1697 AAATPQVSS 1705



 Score = 32.0 bits (71), Expect = 0.36
 Identities = 25/68 (36%), Positives = 31/68 (45%)
 Frame = +2

Query: 131  FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 310
            F S   FGQ ++S    TS + FGA S    +S+ +    SP T  G        FG   
Sbjct: 1750 FSSVPAFGQPASSTPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGL-------FG--Q 1800

Query: 311  STAGAFGQ 334
            S A AFGQ
Sbjct: 1801 SNAPAFGQ 1808



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = +2

Query: 137  STNP--FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQT-GTTSPFGAT 307
            ST P  FGQ + S     ++ P  + SGF   +  T   G     FG  T G  S FG +
Sbjct: 1680 STAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPG----VFGQTTFGQASVFGQS 1735

Query: 308  SSTAG---AFGQP 337
            +S+A    +F QP
Sbjct: 1736 ASSAASVFSFSQP 1748



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
 Frame = +2

Query: 149  FGQSS-ASAFGQTSSN---PFGA----QSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 304
            FG SS  ++FG  +S     FG+     SGFG  S+  + FGS T  F         FG+
Sbjct: 2026 FGSSSNTTSFGTLASQNAPTFGSLSQQTSGFGTQSSGFSGFGSGTGGFS--------FGS 2077

Query: 305  TSSTAGAFG 331
             +S+   FG
Sbjct: 2078 NNSSVQGFG 2086

---

>NU100_YEAST (Q02629) Nucleoporin NUP100/NSP100 (Nuclear pore protein|
           NUP100/NSP100)
          Length = 959

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 33/81 (40%), Positives = 41/81 (50%), Gaps = 14/81 (17%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSS-NPFG--AQSGFGQTSTATN-PFG-----SPTTAFGAQ-- 277
           FGS N    S+ + FG +SS   FG    + F   S +TN PFG     +  T FG+Q  
Sbjct: 91  FGSLNSSNASNGNTFGGSSSMGSFGGNTNNAFNNNSNSTNSPFGFNKPNTGGTLFGSQNN 150

Query: 278 --TGTTSPFGATS-STAGAFG 331
              GT+S FG  S ST G FG
Sbjct: 151 NSAGTSSLFGGQSTSTTGTFG 171



 Score = 33.9 bits (76), Expect = 0.096
 Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 34/102 (33%)
 Frame = +2

Query: 128 MFGSTNP--------FGQSSASAFGQTSSNP---FG------------AQSGFGQTSTAT 238
           MFG+  P        FG +++S  GQ S  P   FG            AQSGFG  ++A 
Sbjct: 1   MFGNNRPMFGGSNLSFGSNTSSFGGQQSQQPNSLFGNSNNNNNSTSNNAQSGFGGFTSAA 60

Query: 239 NP-----FGSPTT----AFGAQTGTT--SPFGATSSTAGAFG 331
                  FG+  T    AFG   G T  SPFG+ +S+  + G
Sbjct: 61  GSNSNSLFGNNNTQNNGAFGQSMGATQNSPFGSLNSSNASNG 102



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
 Frame = +2

Query: 137 STNP-FGQSSASAFGQTSSNPFGAQSG-----------FGQTSTATNPFGSPTTAFGAQT 280
           STN  FG ++ ++   T++  FGA+             FG +++ ++  G     FG  T
Sbjct: 487 STNGLFGNNANNSTSTTNTGLFGAKPDSQSKPALGGGLFGNSNSNSSTIGQNKPVFGGTT 546

Query: 281 GTTSPFGATSSTAGAFG 331
             T  FGAT + + A G
Sbjct: 547 QNTGLFGATGTNSSAVG 563



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 12/80 (15%)
 Frame = +2

Query: 128 MFGSTN-----PFGQSSASAFGQTS-------SNPFGAQSGFGQTSTATNPFGSPTTAFG 271
           +FG+TN        Q   S FG T         NP   QSG G +   T P  +  + FG
Sbjct: 418 LFGTTNVPTSNTQSQQGNSLFGATKLTNMPFGGNPTANQSGSGNSLFGTKPASTTGSLFG 477

Query: 272 AQTGTTSPFGATSSTAGAFG 331
             T +T+      ST G FG
Sbjct: 478 NNTASTT----VPSTNGLFG 493



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 26/70 (37%), Positives = 33/70 (47%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 310
           FG+ N  G SS   FG   S P G+ S FGQ++   N  G+ T       G  +     S
Sbjct: 233 FGNQNQLGGSS---FG---SKPVGSGSLFGQSN---NTLGNTTNNRNGLFGQMNSSNQGS 283

Query: 311 STAGAFGQPS 340
           S +G FGQ S
Sbjct: 284 SNSGLFGQNS 293



 Score = 31.6 bits (70), Expect = 0.48
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 31/99 (31%)
 Frame = +2

Query: 137 STN-PFG----QSSASAFGQTSSNPFGAQSGFG-QTSTATNPFGSPTTAFG--------- 271
           STN PFG     +  + FG  ++N  G  S FG Q+++ T  FG+  ++FG         
Sbjct: 128 STNSPFGFNKPNTGGTLFGSQNNNSAGTSSLFGGQSTSTTGTFGNTGSSFGTGLNGNGSN 187

Query: 272 -------AQTGTT---------SPFGATSSTAGAFGQPS 340
                  +Q+ TT         S FG  +     FGQ S
Sbjct: 188 IFGAGNNSQSNTTGSLFGNQQSSAFGTNNQQGSLFGQQS 226



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGS-PTTAFGAQTGTTSPFGAT 307
           FG+T   G S  +      SN FGA +   Q++T  + FG+  ++AFG      S FG  
Sbjct: 170 FGNT---GSSFGTGLNGNGSNIFGAGNN-SQSNTTGSLFGNQQSSAFGTNNQQGSLFGQQ 225

Query: 308 S-STAGAFG 331
           S +T  AFG
Sbjct: 226 SQNTNNAFG 234



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 14/80 (17%)
 Frame = +2

Query: 128 MFGSTNPFGQSSASAFGQ----TSSNPFGAQSG------FGQTSTATNPFGSP--TTAFG 271
           +FG  N   Q S   FG     T+ + FG  S       FG T+  T+   S    + FG
Sbjct: 380 LFGQNNNQQQQSTGLFGAKPAGTTGSLFGGNSSTQPNSLFGTTNVPTSNTQSQQGNSLFG 439

Query: 272 AQTGTTSPFGA--TSSTAGA 325
           A   T  PFG   T++ +G+
Sbjct: 440 ATKLTNMPFGGNPTANQSGS 459

---

>NUP54_DROME (Q9V6B9) Probable nucleoporin Nup54|
          Length = 610

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
 Frame = +2

Query: 158 SSASAFG-QTSSNPFGAQSGFGQTS--------TATNPFGSP----TTAFGAQTGTTSPF 298
           +S  AFG Q +++ FGA S FG T+        T T+ FG      T AFGA T TT+  
Sbjct: 46  TSTPAFGAQPATSAFGAGSAFGATAAAPAFGAATGTSAFGGSAFGSTPAFGAATTTTAGT 105

Query: 299 GATSSTAGAFGQPSA 343
           G      G FG   A
Sbjct: 106 GLGGGGFGGFGAAPA 120



 Score = 37.4 bits (85), Expect = 0.009
 Identities = 29/71 (40%), Positives = 37/71 (52%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 310
           FGS    G +S  A  +T+   FG  S FG T+  + P      AFGAQ  +T  FGA  
Sbjct: 4   FGSNTSLGATSTPA--KTTGGLFG--SPFGGTAATSQP----APAFGAQATSTPAFGAQP 55

Query: 311 STAGAFGQPSA 343
           +T+ AFG  SA
Sbjct: 56  ATS-AFGAGSA 65



 Score = 31.2 bits (69), Expect = 0.62
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP----F 298
           FG+     Q+       TS+ P  A SGFGQ + A+    S  + FG  T T++P    F
Sbjct: 115 FGAAPATSQAGLFGAPATSAAP-PAFSGFGQQAAASTAPASGFSGFGTTT-TSAPAFGGF 172

Query: 299 GATSST---AGAFG 331
           G + ST    GAFG
Sbjct: 173 GTSQSTGFGGGAFG 186

---

>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore|
            membrane protein of 121 kDa) (P145)
          Length = 1229

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 12/78 (15%)
 Frame = +2

Query: 149  FGQSSASAFG-QTSSNPFGA----QSGFGQTSTATNPFGSPTTA-FGAQTGTTSP----- 295
            FG ++ SAFG + +++ FGA    Q  FG  STA   FG+ T++ FGA T T S      
Sbjct: 1009 FGGATHSAFGLKATASAFGAPASSQPAFGG-STAVFSFGAATSSGFGATTQTASSGSSSS 1067

Query: 296  -FGATSSTAGAFGQPSAP 346
             FG+T+ +   FG  +AP
Sbjct: 1068 VFGSTTPSPFTFGGSAAP 1085



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +2

Query: 152  GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 325
            G ++  +FG  +S+ FGA       +T T   GS ++ FG+ T +   FG +++ AG+
Sbjct: 1038 GSTAVFSFGAATSSGFGA-------TTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGS 1088



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 17/85 (20%)
 Frame = +2

Query: 131  FGSTNPFGQS--SASAFGQTSSNPF---GAQSGFGQTSTATN---PFGSPTT---AFGA- 274
            FG+T     S  S+S FG T+ +PF   G+ +  G  S   N   P  S TT   +FGA 
Sbjct: 1053 FGATTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGSGSFGINVATPGSSATTGAFSFGAG 1112

Query: 275  ---QTGTTSPF--GATSSTAGAFGQ 334
                T T++PF  G   +  G  GQ
Sbjct: 1113 QSGSTATSTPFTGGLGQNALGTTGQ 1137



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = +2

Query: 149  FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPF---GSPTTAFGAQTGTTSPFGATSSTA 319
            FG +++S FG T+       S     ST  +PF   GS   A     G       +S+T 
Sbjct: 1045 FGAATSSGFGATTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGSGSFGINVATPGSSATT 1104

Query: 320  GAF 328
            GAF
Sbjct: 1105 GAF 1107



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = +2

Query: 140  TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPF--GSPTTAFGAQTGTTSPFGATSS 313
            T   GQ++    GQ++   F   S     +T + P   G+ T  FG  T   +P   TS 
Sbjct: 1124 TGGLGQNALGTTGQSTPFAFNVSS-----TTESKPVFGGTATPTFGLNT--PAPGVGTSG 1176

Query: 314  TAGAFGQPSAP 346
            ++ +FG  SAP
Sbjct: 1177 SSLSFGASSAP 1187



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 25/98 (25%)
 Frame = +2

Query: 128  MFGSTNP----FGQSSASA----FGQTSSNP----------FGA-QSGFGQTSTATNPF- 247
            +FGST P    FG S+A A    FG   + P          FGA QSG   TST   PF 
Sbjct: 1068 VFGSTTPSPFTFGGSAAPAGSGSFGINVATPGSSATTGAFSFGAGQSGSTATST---PFT 1124

Query: 248  -GSPTTAFGAQTGTTSPF----GATSSTAGAFGQPSAP 346
             G    A G  TG ++PF     +T+ +   FG  + P
Sbjct: 1125 GGLGQNALGT-TGQSTPFAFNVSSTTESKPVFGGTATP 1161



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 10/59 (16%)
 Frame = +2

Query: 149  FGQSSASAFGQTSSNP----------FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 295
            FG ++   FG  +  P          FGA S   Q      PFGS   +F    G+ +P
Sbjct: 1155 FGGTATPTFGLNTPAPGVGTSGSSLSFGASSAPAQGFVGVAPFGSAAPSFSIGAGSKTP 1213



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPF--------GAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 304
           F Q++  A   T++ P          A +     S +T+    P   FG  + ++S    
Sbjct: 768 FKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAFGFGINSVSSSSVST 827

Query: 305 TSSTAGAFGQP 337
           T+STA A  QP
Sbjct: 828 TTSTATAASQP 838

---

>NU116_YEAST (Q02630) Nucleoporin NUP116/NSP116 (Nuclear pore protein|
           NUP116/NSP116)
          Length = 1113

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
 Frame = +2

Query: 131 FGSTN-----PFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 295
           FG+ N      FGQ +  AF Q  +   G+   FGQ++   N       AFG Q GT + 
Sbjct: 297 FGANNVSNGGAFGQVNRGAFPQQQTQQ-GSGGIFGQSNANANG-----GAFGQQQGTGAL 350

Query: 296 FGATSSTAGAFGQ 334
           FGA  ++ G FGQ
Sbjct: 351 FGAKPASGGLFGQ 363



 Score = 35.0 bits (79), Expect = 0.043
 Identities = 32/75 (42%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
 Frame = +2

Query: 137 STNPFGQSSASAFG--QTSSNPFGAQSGFG---QTSTATNP-FGSPTTAFGAQTGTTSPF 298
           +T PFG S+ S FG  Q    P    S FG   QT+T   P FG+    FG QT + SPF
Sbjct: 13  TTQPFG-STGSTFGGQQQQQQPVANTSAFGLSQQTNTTQAPAFGN----FGNQT-SNSPF 66

Query: 299 GATSSTAG---AFGQ 334
           G + ST      FGQ
Sbjct: 67  GMSGSTTANGTPFGQ 81



 Score = 34.3 bits (77), Expect = 0.073
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQS-GFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA----- 319
           +S   FG   SN  G    G  Q +   NP  +    FG++  T S FG T+STA     
Sbjct: 569 ASGGLFGSKPSNTVGGGLFGNNQVANQNNPASTSGGLFGSKPATGSLFGGTNSTAPNASS 628

Query: 320 -GAFGQPSA 343
            G FG  +A
Sbjct: 629 GGIFGSNNA 637



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
 Frame = +2

Query: 200 GAQSGFGQTSTAT---NPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSA 343
           G + G  Q  T T   NP G+  T FG      S   AT  T G FGQ  A
Sbjct: 164 GRKFGTSQNGTGTTFNNPQGTTNTGFGIMGNNNSTTSAT--TGGLFGQKPA 212



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGA-QSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 331
           +S +  G T +NP G   +GFG      +   + T     Q   T  FG  + + G FG
Sbjct: 169 TSQNGTGTTFNNPQGTTNTGFGIMGNNNSTTSATTGGLFGQKPATGMFGTGTGSGGGFG 227



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
 Frame = +2

Query: 149 FGQSSAS-AFGQTSSNPFGAQSG-FGQTSTATNPFGSPTTAFGAQTGTTSP--FGATSST 316
           FGQS+ S AFG  ++NP G   G FGQT+   +  G     FG Q  + +   FG  + +
Sbjct: 361 FGQSAGSKAFGM-NTNPTGTTGGLFGQTNQQQSGGG----LFGQQQNSNAGGLFGQNNQS 415

Query: 317 ---AGAFGQPSA 343
              +G FGQ ++
Sbjct: 416 QNQSGLFGQQNS 427



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 10/55 (18%)
 Frame = +2

Query: 197 FGAQSGFGQTSTATNPFGSPTTAFGAQ------TGTTSPFGATSST----AGAFG 331
           FG   G   ++T T PFGS  + FG Q         TS FG +  T    A AFG
Sbjct: 2   FGVSRGAFPSAT-TQPFGSTGSTFGGQQQQQQPVANTSAFGLSQQTNTTQAPAFG 55



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
 Frame = +2

Query: 128 MFGSTN-----PFGQSSASAFGQTSSNPFGAQ-SGFGQTSTATN 241
           +FG TN     PFGQ+      Q +++ FGA+ +GFG TS  +N
Sbjct: 498 LFGQTNQNNNQPFGQNGLQQ-PQQNNSLFGAKPTGFGNTSLFSN 540

---

>GAMP_PROCL (Q7M3P2) Gastrolith matrix protein (Fragment)|
          Length = 96

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSP---TTAFGAQTGTTSPFG 301
           FGSTN         FG +   P    +GFG    A+  FGSP   + AFG+ +  +   G
Sbjct: 15  FGSTN---------FGSSGFGPSLGSTGFGSAGFASPGFGSPSLGSAAFGSSSFGSPSLG 65

Query: 302 ATSSTAGAFGQPS 340
           +T   + +FG  S
Sbjct: 66  STGFGSSSFGSTS 78

---

>GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-) (Germline|
           helicase 1)
          Length = 763

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFG-AQSGFGQTSTATNPFGS--PTTAFGAQTGTTSPFG 301
           FG  N  G  S    G T  +P+G A SGFG  STAT+ FGS   ++AFG   G      
Sbjct: 74  FGGGNTCG--SGFGGGSTGGSPYGGASSGFGG-STATSGFGSGEKSSAFGGSGGFGGSAT 130

Query: 302 ATSSTAGAFG 331
              S  G+FG
Sbjct: 131 GFGSGGGSFG 140



 Score = 36.2 bits (82), Expect = 0.019
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
 Frame = +2

Query: 152 GQSSASAFG--QTSSNPFGAQ----SGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 313
           G +  S FG  +T  + FG      SGFG  ST  +P+G  ++ FG  T  TS FG +  
Sbjct: 57  GNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGGST-ATSGFG-SGE 114

Query: 314 TAGAFG 331
            + AFG
Sbjct: 115 KSSAFG 120



 Score = 33.5 bits (75), Expect = 0.13
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
 Frame = +2

Query: 152 GQSSASAFG--QTSSNPFGAQ----SGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 313
           G +  S FG   T  + FG      SGFG  +T  + FG  +T      G +S FG +++
Sbjct: 47  GNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGGSTA 106

Query: 314 TAG 322
           T+G
Sbjct: 107 TSG 109

---

>NSP1_YEAST (P14907) Nucleoporin NSP1 (Nuclear pore protein NSP1)|
           (Nucleoskeletal-like protein) (p110)
          Length = 823

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGF-----GQTSTATNPFGSPTT---AFGAQTGTTS 292
           +TN    + A AFG T  + FG  +          S+ T  FGS  T   AFG    T++
Sbjct: 24  TTNQNSSTGAGAFG-TGQSTFGFNNSAPNNTNNANSSITPAFGSNNTGNTAFGNSNPTSN 82

Query: 293 PFGATSSTAGAFGQPSA 343
            FG+ +ST   FG  SA
Sbjct: 83  VFGSNNSTTNTFGSNSA 99



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGS---PTTAFGAQTGTTSPFG 301
           FGS N    +  +AFG  +SNP    + FG  ++ TN FGS    T+ FG+ +   +   
Sbjct: 64  FGSNN----TGNTAFG--NSNP--TSNVFGSNNSTTNTFGSNSAGTSLFGSSSAQQTKSN 115

Query: 302 ATSSTAGAFGQPS 340
            T+     FG  S
Sbjct: 116 GTAG-GNTFGSSS 127

---

>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)|
          Length = 512

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQT-----GTTSPFG 301
           S  P+GQ S   +GQ++       SG+GQ S+ +  +G    ++  Q+     G+   +G
Sbjct: 29  SNQPYGQQSYGGYGQSTDT-----SGYGQ-SSYSGSYGQTQNSYSTQSAPQGYGSAGGYG 82

Query: 302 ATSSTAGAFGQPSA 343
           ++ S+  ++GQ S+
Sbjct: 83  SSQSSQSSYGQQSS 96



 Score = 35.0 bits (79), Expect = 0.043
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +2

Query: 137 STNPFGQSS-ASAFGQTSSNPFGAQSGFG--QTSTATNPFGSPTTAFGAQTGTTSPFGAT 307
           ++  +G SS +S +GQ     +G QSG+G  Q S       +P   +G Q+   S  G  
Sbjct: 109 TSGSYGSSSQSSGYGQPQGGGYGQQSGYGGQQQSYGQQQSYNPPQGYGQQSQYNSSGGGG 168

Query: 308 SSTAGAFGQ 334
               G++GQ
Sbjct: 169 GGGGGSYGQ 177



 Score = 34.7 bits (78), Expect = 0.056
 Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 14/80 (17%)
 Frame = +2

Query: 140 TNPFGQSSAS-AFGQTSSN--------PFGAQSGFGQTSTATNPFGSPTTAFG-----AQ 277
           T+ +GQSS S ++GQT ++         +G+  G+G + ++ + +G  ++  G     A 
Sbjct: 47  TSGYGQSSYSGSYGQTQNSYSTQSAPQGYGSAGGYGSSQSSQSSYGQQSSYPGYGQQPAP 106

Query: 278 TGTTSPFGATSSTAGAFGQP 337
           + T+  +G++S ++G +GQP
Sbjct: 107 SSTSGSYGSSSQSSG-YGQP 125

---

>NUPL_MOUSE (Q8K2K6) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein|
           homolog)
          Length = 561

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 21/120 (17%)
 Frame = +2

Query: 50  AAVDPILXXXXXXXXXXXXXXXXXXXMFGSTNPFGQSSASA--------FGQT-SSNPFG 202
           A +D +                    +FG T P G S+ +         FG T S+NPF 
Sbjct: 378 AELDSVFSSAATSSNAYTPTSNASSSVFG-TVPVGASAQTQPASSGPAPFGATPSTNPFV 436

Query: 203 AQSGFGQTSTATNPF-----GSPTTAFGAQT-------GTTSPFGATSSTAGAFGQPSAP 346
           A +G    +++TNPF     G+    FG  +       GT + +   +S +G+F QP+ P
Sbjct: 437 AATG-PSAASSTNPFQTNARGATAATFGTASMSMPAGFGTPAQYSLPTSFSGSFQQPAFP 495

---

>NUPL_RAT (Q4KLH5) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein|
           homolog)
          Length = 561

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 21/120 (17%)
 Frame = +2

Query: 50  AAVDPILXXXXXXXXXXXXXXXXXXXMFGSTNPFG--------QSSASAFGQT-SSNPFG 202
           A +D +                    +FG T P G         S  + FG T S+NPF 
Sbjct: 378 AELDSVFSSAATSNNAYTSTSNASSSVFG-TVPVGASPQTQPASSGPAPFGATPSTNPFV 436

Query: 203 AQSGFGQTSTATNPF-----GSPTTAFGAQT-------GTTSPFGATSSTAGAFGQPSAP 346
           A +G    +++TNPF     G+    FG  +       GT + +   +S +G+F QP  P
Sbjct: 437 AATG-PSAASSTNPFQTNARGATAATFGTASMSMPAGFGTPAQYSLPTSFSGSFQQPPFP 495



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 7/46 (15%)
 Frame = +2

Query: 131 FGSTNP----FGQSSASAFGQTSSNPF--GAQSG-FGQTSTATNPF 247
           FG T P    FGQ +A+     SSNPF  GA +G F   S++TNPF
Sbjct: 518 FGQTKPVVTPFGQVAAAG---VSSNPFMTGAPTGQFPTGSSSTNPF 560



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = +2

Query: 134 GSTNPFGQSSASAF-GQTSSNPFGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGAT 307
           G   P   S  ++F G     PF AQ+ F Q T+ +  P G+    FG      +PFG  
Sbjct: 472 GFGTPAQYSLPTSFSGSFQQPPFPAQAAFPQQTAFSQQPNGAGFATFGQTKPVVTPFGQV 531

Query: 308 SSTAGAFGQP 337
           ++ AG    P
Sbjct: 532 AA-AGVSSNP 540

---

>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (DNup214)
          Length = 1711

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +2

Query: 149  FGQSSASA---FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA 319
            FGQSSA+A    G   SNP G+           + FGSP TA  A  G+    G++S   
Sbjct: 1512 FGQSSAAAPAAGGNIFSNPVGSPQASPFGGGGNSIFGSPATAPPASGGSIFGGGSSSGGF 1571

Query: 320  GAFGQ 334
            G+F Q
Sbjct: 1572 GSFTQ 1576



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 21/64 (32%), Positives = 26/64 (40%)
 Frame = +2

Query: 140  TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA 319
            +NP G   AS FG       G  S FG  +TA    G      G+ +G    F  T+   
Sbjct: 1528 SNPVGSPQASPFGG------GGNSIFGSPATAPPASGGSIFGGGSSSGGFGSFTQTTPAQ 1581

Query: 320  GAFG 331
            G FG
Sbjct: 1582 GGFG 1585



 Score = 32.0 bits (71), Expect = 0.36
 Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
 Frame = +2

Query: 143  NPFGQSSASAFGQTSSNP---FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 313
            +PFG    S FG  ++ P    G+  G G +S     F   T A G   G     G  S 
Sbjct: 1537 SPFGGGGNSIFGSPATAPPASGGSIFGGGSSSGGFGSFTQTTPAQGGFGGGFGQGGGGSV 1596

Query: 314  TAGAFGQPSAP 346
                FG P AP
Sbjct: 1597 AQTGFGSPQAP 1607



 Score = 31.6 bits (70), Expect = 0.48
 Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
 Frame = +2

Query: 128  MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTA---------TNPFGSP-TTAFGAQ 277
            +FG  N  G   A A G TS   FG Q  FGQ+S A         +NP GSP  + FG  
Sbjct: 1486 IFGGGNTQGAVGAPAAGSTSI--FG-QKVFGQSSAAAPAAGGNIFSNPVGSPQASPFGG- 1541

Query: 278  TGTTSPFGATSSTAGAFG 331
             G  S FG+ ++   A G
Sbjct: 1542 -GGNSIFGSPATAPPASG 1558



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = +2

Query: 137  STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
            +T P G  +   FG   S  FGA   FG  +T  +P G       +   +  PFGA +  
Sbjct: 1611 TTTPGGFGAKPVFG--GSPAFGASPTFGGGATFGSPKGFGGFGGASPVASPPPFGAAAKP 1668

Query: 317  A 319
            A
Sbjct: 1669 A 1669



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
 Frame = +2

Query: 128  MFGS-----TNPFGQSSASAFGQTSS-NPFGAQSGFGQTSTATNP--FGSPTTAFGAQTG 283
            +FGS     T+ FG ++ +    T++  P    +G   ++  +NP  FGSPTT   A  G
Sbjct: 1387 IFGSIPKAETSVFGGATTAPSNTTAAATPDAPPAGLFASAAISNPSPFGSPTTRAPASGG 1446

Query: 284  TTSPFGATSSTAGAFGQPS 340
                FG     +  FGQP+
Sbjct: 1447 NI--FGQAVKPS-VFGQPA 1462

---

>NU153_HUMAN (P49790) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)|
            (153 kDa nucleoporin)
          Length = 1475

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 30/72 (41%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
 Frame = +2

Query: 149  FGQSSASA----FGQT-SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS---PFGA 304
            FG  S+S+    FGQ  S + FG  SG    S++   FGS TT F     + S    FGA
Sbjct: 1362 FGTVSSSSQPPVFGQQPSQSAFG--SGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGA 1419

Query: 305  TSSTAGAFGQPS 340
             SST  A  QPS
Sbjct: 1420 NSSTPAASAQPS 1431



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
 Frame = +2

Query: 128  MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQ----------TSTATNPFGSPTT--AFG 271
            +FG T P   S++ AFG   +  FG   G  Q          +STA  P GS      FG
Sbjct: 1305 VFG-TGPSAPSASPAFGANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFG 1363

Query: 272  AQTGTTSP--FGATSSTAGAFGQPSAP 346
              + ++ P  FG   S + AFG  + P
Sbjct: 1364 TVSSSSQPPVFGQQPSQS-AFGSGTTP 1389



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 14/86 (16%)
 Frame = +2

Query: 131  FGSTNPFGQSSASAFGQ-----------TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQ 277
            FG+T     S +  F Q           T+  PF    G    +T T+ FG   T   + 
Sbjct: 1240 FGNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSS 1299

Query: 278  TGTTSPFG---ATSSTAGAFGQPSAP 346
             G++  FG   +  S + AFG    P
Sbjct: 1300 AGSSFVFGTGPSAPSASPAFGANQTP 1325

---

>NUPL1_HUMAN (Q9BVL2) Nucleoporin p58/p45 (Nucleoporin-like 1)|
          Length = 599

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
 Frame = +2

Query: 146 PFGQS-----SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-FGAT 307
           PFG        +S  G ++   FG  SGFG ++T  + FG  TT     +G+ S  FG++
Sbjct: 491 PFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCSTTGASTFGFGTT--NKPSGSLSAGFGSS 548

Query: 308 SSTAGAFGQP 337
           S++   F  P
Sbjct: 549 STSGFNFSNP 558

---

>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)|
          Length = 1971

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 28/74 (37%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
 Frame = +2

Query: 143 NPFGQSSASAFGQTSSNP----------FGAQSGFGQTSTATNPFG-SPTTAFGAQTGTT 289
           NPFG SS SAF  +SS            FG  S FGQ ST +     S   +F   +G  
Sbjct: 5   NPFGGSSPSAFAVSSSTTGTYQTKSPFRFGQPSLFGQNSTPSKSLAFSQVPSFATPSG-- 62

Query: 290 SPFGATSSTAGAFG 331
              G+ SS+  AFG
Sbjct: 63  ---GSHSSSLPAFG 73

---

>NU145_YEAST (P49687) Nucleoporin NUP145 precursor (EC 3.4.21.-) (Nuclear pore|
           protein NUP145) [Contains: Nucleoporin NUP145N
           (N-NUP145); Nucleoporin NUP145C (C-NUP145)]
          Length = 1317

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNP--FGSPTTAFGAQTGTTSPFGAT 307
           GST  F  S+  A    +   FG  +    TST  N   FG PTT      G      +T
Sbjct: 117 GSTGLFSGSNNIASSTQNGGLFGNSNNNNITSTTQNGGLFGKPTTTPAGAGGLFGNSSST 176

Query: 308 SSTAGAFG 331
           +ST G FG
Sbjct: 177 NSTTGLFG 184

---

>TROP_HUMAN (Q12816) Trophinin (MAGE-D3 antigen)|
          Length = 1387

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
 Frame = +2

Query: 152  GQSSASA-FGQTSSNPF------GAQSGFGQTSTATNPFGS---PTTAFGAQTGTTSPFG 301
            G SS SA FG T S            +GFG     +  FGS    +T FG    T++ FG
Sbjct: 897  GSSSTSANFGGTLSTSICFDGSPSTGAGFGGALNTSASFGSVLNTSTGFGGAMSTSADFG 956

Query: 302  ATSSTAGAFG 331
             T ST+  FG
Sbjct: 957  GTLSTSVCFG 966



 Score = 33.9 bits (76), Expect = 0.096
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
 Frame = +2

Query: 149  FGQSSASAFGQTSSNPFG------AQSGFGQTSTATNPFGSP---TTAFGAQTGTTSPFG 301
            F   ++S FG T S   G        + FG   T +  F S    +T FG    T+  FG
Sbjct: 797  FSGGASSGFGGTLSTTAGFSGVLSTSTSFGSAPTTSTVFSSALSTSTGFGGILSTSVCFG 856

Query: 302  ATSSTAGAFG 331
             + S++G+FG
Sbjct: 857  GSPSSSGSFG 866



 Score = 31.6 bits (70), Expect = 0.48
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
 Frame = +2

Query: 134  GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGS---PTTAFGAQTGTTSPFGA 304
            G++  FG    ++ G   S   G  +GFG     ++ FG       +FG+  GT++ F  
Sbjct: 1210 GTSTGFGGGLGTSAG--FSGGLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGTSAGFSG 1267

Query: 305  TSSTAGAFG-QPSA 343
              ST+  FG +P+A
Sbjct: 1268 GLSTSDGFGSRPNA 1281



 Score = 31.2 bits (69), Expect = 0.62
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +2

Query: 158  SSASAFGQTSSNPFGAQSGFGQTSTATNPFG---SPTTAFGAQTGTTSPFGATSSTAGAF 328
            SS+ +FG T S        FG +   +  FG   S + +FG  + T++ FG T ST+  F
Sbjct: 860  SSSGSFGGTLSTSIC----FGGSPCTSTGFGGTLSTSVSFGGSSSTSANFGGTLSTSICF 915

Query: 329  -GQPS 340
             G PS
Sbjct: 916  DGSPS 920



 Score = 31.2 bits (69), Expect = 0.62
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = +2

Query: 158  SSASAFG--QTSSNPFGAQSGFGQTSTATNPFGSP--TTAFGAQTGTTSPFGATSSTAGA 325
            S++  FG   +SS  FG     G  ST+    GSP  +T FG    T+  FG +SST+  
Sbjct: 850  STSVCFGGSPSSSGSFG-----GTLSTSICFGGSPCTSTGFGGTLSTSVSFGGSSSTSAN 904

Query: 326  FG 331
            FG
Sbjct: 905  FG 906



 Score = 30.8 bits (68), Expect = 0.81
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = +2

Query: 131  FGSTNPFGQ--SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 304
            F ++  FG   S+A+ FG T SN  G    FG          S + +FG   GT+  FG 
Sbjct: 1059 FSTSAGFGGALSTAADFGGTPSNSIG----FGAAP-------STSVSFGGAHGTSLCFGG 1107

Query: 305  TSSTAGAFGQPS 340
              ST+  FG  S
Sbjct: 1108 APSTSLCFGSAS 1119



 Score = 30.8 bits (68), Expect = 0.81
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
 Frame = +2

Query: 137 STNPFGQSSASAFG----QTSSNPFGAQSGF-GQTSTATNPFGSPTTAFGAQTGTTSPFG 301
           ++  F   ++ +FG     ++S   G  S F G  ST+    G  ++ FG    TT+ F 
Sbjct: 757 TSTSFSSEASISFGGMPCTSASFSGGVSSSFSGPLSTSATFSGGASSGFGGTLSTTAGFS 816

Query: 302 ATSSTAGAFGQPSAP 346
              ST+ +FG  SAP
Sbjct: 817 GVLSTSTSFG--SAP 829



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
 Frame = +2

Query: 158  SSASAFGQTSSNPFGAQSGFGQTSTATNPF-GSPTTA--FGAQTGTTSPFGATSSTAGAF 328
            S++ +FG +SS      + FG T + +  F GSP+T   FG    T++ FG+  +T+  F
Sbjct: 890  STSVSFGGSSST----SANFGGTLSTSICFDGSPSTGAGFGGALNTSASFGSVLNTSTGF 945

Query: 329  G 331
            G
Sbjct: 946  G 946



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 25/95 (26%)
 Frame = +2

Query: 131  FGSTNPFGQSSASAFGQTSSNPFGAQS------------GFGQTSTATNPF-GSPTTAFG 271
            FGST   G S+  + G ++S+ FG++             GFG  S  +  F G P+T+ G
Sbjct: 1255 FGST--LGTSAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFTGEPSTSTG 1312

Query: 272  AQTGTTSPFGATS------------STAGAFGQPS 340
              +G +S  G +             ST+G  G PS
Sbjct: 1313 FSSGPSSIVGFSGGPSTGVGFCSGPSTSGFSGGPS 1347



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
 Frame = +2

Query: 137  STNPFGQSSASA-FGQTSSNP--FGAQSG----FGQTSTATNPFG---SPTTAFGAQTGT 286
            ST   G  S SA FG T S    FG   G    FG        +G   S  T FG    T
Sbjct: 942  STGFGGAMSTSADFGGTLSTSVCFGGSPGTSVSFGSALNTNAGYGGAVSTNTDFGGTLST 1001

Query: 287  TSPFGATSSTAGAFG 331
            +  FG + ST+  FG
Sbjct: 1002 SVCFGGSPSTSAGFG 1016



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +2

Query: 215 FGQTSTATNPFG---SPTTAFGAQTGTTSPFGATSSTAGAFGQPSA 343
           FG + +++  FG   S +  FG    T++ FG T ST+ +FG  S+
Sbjct: 855 FGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGGTLSTSVSFGGSSS 900



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +2

Query: 158 SSASAFGQ--TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 331
           S++++FG   T+S  F +      TST      S +  FG    ++  FG T ST+  FG
Sbjct: 820 STSTSFGSAPTTSTVFSSALS---TSTGFGGILSTSVCFGGSPSSSGSFGGTLSTSICFG 876



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = +2

Query: 134  GSTNPFGQS---SASAFGQTSSNP-FGAQSGFGQTSTATNPFGSPTTA--FGAQTGTTSP 295
            G++  FG +   +A   G  S+N  FG     G  ST+    GSP+T+  FG    T + 
Sbjct: 970  GTSVSFGSALNTNAGYGGAVSTNTDFG-----GTLSTSVCFGGSPSTSAGFGGALNTNAS 1024

Query: 296  FGATSSTAGAF 328
            FG   ST+ +F
Sbjct: 1025 FGCAVSTSASF 1035

---

>NUP49_YEAST (Q02199) Nucleoporin NUP49/NSP49 (Nuclear pore protein NUP49/NSP49)|
          Length = 472

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF----GATSSTA 319
           G ++ASA G   S P G  S FG TST++ P       FGA+   TS F    G T++  
Sbjct: 141 GMNNASA-GLFGSKPAGGTSLFGNTSTSSAP-AQNQGMFGAKPAGTSLFGNNAGNTTTGG 198

Query: 320 GAFG 331
           G FG
Sbjct: 199 GLFG 202



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
 Frame = +2

Query: 128 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPF----GSPTTA---FGAQ-TG 283
           +FGS  P G +S      TSS P   Q  FG     T+ F    G+ TT    FG++ TG
Sbjct: 149 LFGS-KPAGGTSLFGNTSTSSAPAQNQGMFGAKPAGTSLFGNNAGNTTTGGGLFGSKPTG 207

Query: 284 TTSPFGATSS 313
            TS FG++++
Sbjct: 208 ATSLFGSSNN 217

---

>CU36_MANSE (Q8MUC5) Pupal cuticle protein 36 precursor (MsCP36) (MS-PCP36)|
          Length = 342

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
 Frame = +2

Query: 131 FGSTNPFGQSSA-----SAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS- 292
           FG   P G  S      S FG   S   GA SGFG  +      G   + FG Q G  S 
Sbjct: 37  FGGAGPKGGGSGFGGAGSGFGGAGSGFGGAGSGFGGGAGGAFGHGGAGSGFGGQAGGYSG 96

Query: 293 PFGATSSTAGAFGQPS 340
             GA   + GA GQ S
Sbjct: 97  AGGAGGYSGGASGQYS 112

---

>RGS6_CAEEL (Q18563) Regulator of G-protein signaling rgs-6|
          Length = 737

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 24/63 (38%), Positives = 34/63 (53%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
           ST    +++A+A G + S    + S   QT T T+P  SPT+     +GTT+   ATSS 
Sbjct: 638 STKIGDEAAAAAAGASPSTSAPSTSTSVQTKTTTSPTKSPTSTTITTSGTTT--SATSSV 695

Query: 317 AGA 325
           A A
Sbjct: 696 ATA 698

---

>NUPL2_XENLA (Q5XGN1) Nucleoporin-like 2|
          Length = 491

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 22/61 (36%), Positives = 25/61 (40%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 328
           F  S+ S FG T+SN     SGFG  S A    G+   A     G  S     S   G F
Sbjct: 325 FAPSTISGFGSTASN-----SGFGAASNAAGFQGAANIAAAPAFGVASSTAPASGFGGGF 379

Query: 329 G 331
           G
Sbjct: 380 G 380

---

>NUPL2_XENTR (Q5FVW4) Nucleoporin-like 2|
          Length = 449

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQ--TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 307
           G+TN    S+  AFG   TS+  FG  SG   T+ + +   S ++ FGA T +TS FG  
Sbjct: 261 GATNSLAGSNVPAFGNKPTSAPSFG--SGGAATAASFSFAPSSSSNFGATT-STSGFGNA 317

Query: 308 SSTAGAFG 331
           S+TA   G
Sbjct: 318 SNTASFQG 325



 Score = 31.2 bits (69), Expect = 0.62
 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT----AFGAQTGTTSP--FGATS 310
           F  SS+S FG T+S      SGFG  S   +  G+  +    AFG  + +T+   FG   
Sbjct: 297 FAPSSSSNFGATTST-----SGFGNASNTASFQGTANSAAAPAFGVASSSTAATGFGGGF 351

Query: 311 STAGA 325
           ST GA
Sbjct: 352 STTGA 356

---

>NUP54_HUMAN (Q7Z3B4) Nucleoporin p54 (54 kDa nucleoporin)|
          Length = 507

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQSGFGQTSTATN---PFGSPTTAFGAQTGTTSPFGATSSTAGAF 328
           S  S     ++ P G   GFG TST       F +PT      TGTT  FG T +    F
Sbjct: 9   SGTSGTAAATAAPAGGFGGFGTTSTTAGSAFSFSAPT-----NTGTTGLFGGTQNKGFGF 63

Query: 329 G 331
           G
Sbjct: 64  G 64



 Score = 31.2 bits (69), Expect = 0.62
 Identities = 21/67 (31%), Positives = 27/67 (40%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 310
           FG       ++ SAF  ++    G    FG T      FG   T FG  TGT++  G   
Sbjct: 25  FGGFGTTSTTAGSAFSFSAPTNTGTTGLFGGTQNKGFGFG---TGFGTTTGTSTGLGTGL 81

Query: 311 STAGAFG 331
            T   FG
Sbjct: 82  GTGLGFG 88



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/50 (42%), Positives = 25/50 (50%)
 Frame = +2

Query: 197 FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAP 346
           FGA SG   T+ AT    +P   FG        FG TS+TAG+    SAP
Sbjct: 5   FGAPSGTSGTAAAT---AAPAGGFGG-------FGTTSTTAGSAFSFSAP 44

---

>AMO1_SCHPO (O74315) Nucleoporin-like protein amo1 (Aberrent microtubule|
           protein 1)
          Length = 475

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = +2

Query: 149 FGQSSASAF-GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 325
           FG  + SAF  Q +++PF +Q+    + T +NP  +  ++FG+     S FG+ +S   A
Sbjct: 207 FGAPTTSAFTSQLNASPF-SQNTSSNSFTGSNPVQNNPSSFGS-----SSFGSATSGPSA 260

Query: 326 FGQPSAP 346
           FG  S P
Sbjct: 261 FGGISQP 267

---

>NUPL1_MOUSE (Q8R332) Nucleoporin p58/p45 (Nucleoporin-like 1)|
          Length = 587

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = +2

Query: 146 PFGQS-----SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-FGAT 307
           PFG        +S  G ++   FG  SGFG  +T  + FG  TT     +G+ S  FG++
Sbjct: 479 PFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCGTTGASTFGFGTT--DKPSGSLSAGFGSS 536

Query: 308 SSTAGAFGQP 337
           S++   F  P
Sbjct: 537 STSGFNFSNP 546



 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 331
           G +SA     TS++  G   GF + + +  PF  P T+  A +G T     TS+ A + G
Sbjct: 79  GGTSAGTAATTSASTTGFSLGFSKPAASATPFALPVTSTSA-SGLTLSSALTSTPAASTG 137



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 331
           G  S  +FG  +S+       FG   ++  P  +  +A G  TG    FG+  +T    G
Sbjct: 23  GAGSGFSFGTVASSTPSVGLNFGSLGSSVTPASTSASAGGFGTGL---FGSKPATGFTLG 79

Query: 332 QPSA 343
             SA
Sbjct: 80  GTSA 83

---

>NUPL1_RAT (P70581) Nucleoporin p58/p45 (Nucleoporin-like 1)|
          Length = 585

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = +2

Query: 146 PFGQS-----SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-FGAT 307
           PFG        +S  G ++   FG  SGFG  +T  + FG  TT     +G+ S  FG++
Sbjct: 477 PFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCGTTGASTFGFGTT--DKPSGSLSAGFGSS 534

Query: 308 SSTAGAFGQP 337
           S++   F  P
Sbjct: 535 STSGFNFSNP 544



 Score = 31.6 bits (70), Expect = 0.48
 Identities = 20/66 (30%), Positives = 31/66 (46%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 313
           G+    G +SA     TS++  G   GF + + +  PF  P T+  A +G T     TS+
Sbjct: 71  GTGFTLGGTSAGTTATTSASTTGFSLGFSKPAASATPFALPVTSTTA-SGLTLSSALTSA 129

Query: 314 TAGAFG 331
            A + G
Sbjct: 130 PAASTG 135

---

>NUP57_YEAST (P48837) Nucleoporin NUP57 (Nuclear pore protein NUP57)|
          Length = 541

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +2

Query: 131 FGSTNP-FGQSSASAFGQT-SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 304
           FG + P  G ++   FG   ++N FG+     Q+ST    FG+        + +T+  G 
Sbjct: 41  FGGSQPNSGTATTGGFGANQATNTFGSNQ---QSSTGGGLFGNKPALGSLGSSSTTASGT 97

Query: 305 TSSTAGAFGQPSA 343
           T++  G FGQ +A
Sbjct: 98  TATGTGLFGQQTA 110

---

>KCNAE_DROME (Q02280) Potassium voltage-gated channel protein eag (Ether-a-go-go|
            protein)
          Length = 1174

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +2

Query: 161  SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 325
            +A+    TSS   G   G G  +T T P   PTTA G+ +GT +   AT++  G+
Sbjct: 1111 TAAQLPSTSSGGAGGGGGSGSGATPTTP--PPTTAGGSGSGTPTSTTATTTPTGS 1163

---

>HRBL_MOUSE (Q80WC7) HIV-1 Rev-binding protein-like protein (Rev/Rex activation|
           domain binding protein-related) (RAB-R)
          Length = 479

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 155 QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 298
           Q + S+FG   ++  G +        +TNPF + ++AF ++  TT+PF
Sbjct: 431 QQNGSSFGDLGTSKLGQRPLSQPAGISTNPFMTGSSAFASKPPTTNPF 478

---

>CU36A_MANSE (Q8T634) Pupal cuticle protein 36a precursor (CP36a)|
          Length = 280

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 28/76 (36%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
 Frame = +2

Query: 131 FGSTNPFGQSSA-----SAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS- 292
           FG   P G  S      S FG   S   GA SGFG  +      G   + FG Q G  S 
Sbjct: 37  FGGAGPKGGGSGFGGAGSGFGGAGSGFGGAGSGFGGGAGGGFGHGGAGSGFGGQAGGYSG 96

Query: 293 PFGATSSTAGAFGQPS 340
             GA     GA GQ S
Sbjct: 97  AGGAGGYIGGASGQYS 112

---

>VG50_ICHV1 (Q00130) Hypothetical gene 50 protein|
          Length = 670

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS-PFGATS 310
           G+T     ++A   G T +         G T T T     PT A G  T TT+ P GAT 
Sbjct: 494 GATGTVTTTTAKPTGATGTVTVATAKPTGATGTVTTTTAKPTGANGTVTTTTAKPTGATG 553

Query: 311 STAGAFGQPS 340
           +      +P+
Sbjct: 554 TVTTTTAKPT 563

---

>PUM2_MOUSE (Q80U58) Pumilio homolog 2|
          Length = 1066

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 131 FGSTNPFGQS-SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 307
           +GS++    S S+S F      P  A  GFG  S+     GS  + FG+  G+++   AT
Sbjct: 524 YGSSSLTNSSQSSSLFSHGPGQPGSASLGFGSGSSLGAAIGSALSGFGSSVGSSASSSAT 583

---

>NUP54_RAT (P70582) Nucleoporin p54 (54 kDa nucleoporin)|
          Length = 510

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 22/50 (44%), Positives = 26/50 (52%)
 Frame = +2

Query: 197 FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAP 346
           FGA SG   TSTAT    +P   FG        FG T++TAG+    SAP
Sbjct: 5   FGAPSGTSGTSTAT---AAPAGGFGG-------FGTTTTTAGSAFSFSAP 44



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/80 (27%), Positives = 27/80 (33%), Gaps = 22/80 (27%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQSGFGQTSTATNP---FGSPT-------------------TAFG 271
           S  S     ++ P G   GFG T+T       F +PT                   T FG
Sbjct: 9   SGTSGTSTATAAPAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLLGGTQNKGFGFGTGFG 68

Query: 272 AQTGTTSPFGATSSTAGAFG 331
             TGT +  G    T   FG
Sbjct: 69  TSTGTGTGLGTGLGTGLGFG 88

---

>NUP54_MOUSE (Q8BTS4) Nucleoporin p54 (54 kDa nucleoporin)|
          Length = 510

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 22/50 (44%), Positives = 26/50 (52%)
 Frame = +2

Query: 197 FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAP 346
           FGA SG   TSTAT    +P   FG        FG T++TAG+    SAP
Sbjct: 5   FGAPSGTSGTSTAT---AAPAGGFGG-------FGTTTTTAGSAFSFSAP 44



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 22/80 (27%), Positives = 27/80 (33%), Gaps = 22/80 (27%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQSGFGQTSTATNP---FGSPT-------------------TAFG 271
           S  S     ++ P G   GFG T+T       F +PT                   T FG
Sbjct: 9   SGTSGTSTATAAPAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLLGGTQNKGFGFGTGFG 68

Query: 272 AQTGTTSPFGATSSTAGAFG 331
             TGT +  G    T   FG
Sbjct: 69  TTTGTGTGLGTGLGTGLGFG 88

---

>CDSN_MOUSE (Q7TPC1) Corneodesmosin precursor|
          Length = 561

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG-TTSPFGATSS 313
           S +  G SS+S    + S  +   +G+ Q+S +    GS     G+QTG ++S  G++SS
Sbjct: 82  SFSSHGGSSSSQGSSSGSLIYKPGTGYSQSSYSYGSGGSRPGGSGSQTGSSSSQTGSSSS 141

Query: 314 TAGAFGQPS 340
            +G+ G  S
Sbjct: 142 QSGSSGSQS 150

---

>HBA1_SCHPO (Q09146) Brefeldin A resistance protein (Caffeine resistance|
           protein 1)
          Length = 399

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 331
           G+  ++A    S +PF   S F   S A++PF + +TA        S FGA +S+  AF 
Sbjct: 125 GKKESAAKPAASVSPF---SQFASFSNASSPFSNVSTASSEPKEEKSAFGAFASSKSAFT 181

Query: 332 QPS 340
             S
Sbjct: 182 MKS 184

---

>NU153_RAT (P49791) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)|
            (153 kDa nucleoporin)
          Length = 1468

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
 Frame = +2

Query: 149  FGQSSASA----FGQTSSNPFGAQSGFGQ-TSTATN--PFGSPTTAFGAQTGTTS---PF 298
            FG  S+S+    FGQ  S     QS FG  T+ A++   FGS TT F       S    F
Sbjct: 1356 FGTVSSSSQPPVFGQQPS-----QSAFGSGTANASSVFQFGSSTTNFNFTNNNPSGVFTF 1410

Query: 299  GATSSTAGAFGQPS 340
            GA+ ST  A  QPS
Sbjct: 1411 GASPSTPAAAAQPS 1424



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +2

Query: 137  STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
            +T  FG  + +   Q ++ P  +      +S++T    S  + FG+ T ++SP       
Sbjct: 1162 ATFAFGNQTNTTTDQGAAKPAFSFLNSSSSSSSTPATSSSASIFGSSTSSSSP----PVA 1217

Query: 317  AGAFGQPSAP 346
            A  FGQ S P
Sbjct: 1218 AFVFGQASNP 1227

---

>GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-) (Germline|
           helicase 2)
          Length = 974

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGA----QSGFGQTSTATNPFGSPTTA---FGAQTGTT 289
           FGS NP G    S FG  ++  FG+     +GFG ++   + FG        FG      
Sbjct: 17  FGS-NPSGFGGGSGFGSGNTGGFGSGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNGNAGG 75

Query: 290 SPFGATSSTAGAFGQPSA 343
           + FG+ ++    FG  +A
Sbjct: 76  TGFGSGNAGGTGFGSGNA 93



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
 Frame = +2

Query: 131 FGSTNP----FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSP-TTAFGAQTGTTSP 295
           FGS N     FG   A   G  S    G  +GFG  S + + FGS  T  FG+     S 
Sbjct: 158 FGSGNAGGTGFGSGKAGGTGFGSGKAGG--TGFGGNSNSGSGFGSGLTNGFGSGNNHESG 215

Query: 296 FGATSSTAGAFG 331
           FG   S  G FG
Sbjct: 216 FGGGKS--GGFG 225

---

>EP15R_MOUSE (Q60902) Epidermal growth factor receptor substrate 15-like 1|
           (Eps15-related protein) (Eps15R) (Epidermal growth
           factor receptor pathway substrate 15-related sequence)
           (Eps15-rs)
          Length = 907

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 24/72 (33%), Positives = 34/72 (47%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 310
           F S++PF  SS S+ G   S+PFG    FG +S ++    +   A  +Q     P G  S
Sbjct: 703 FESSDPFSSSSISSKG---SDPFGTLDPFGSSSFSS----AEGFADFSQMSKPPPSGPFS 755

Query: 311 STAGAFGQPSAP 346
           S+ G  G    P
Sbjct: 756 SSLGGTGFSDDP 767

---

>K2CB_BOVIN (P04262) Keratin, type II cytoskeletal 68 kDa, component IB|
           (Fragment)
          Length = 166

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = +2

Query: 131 FGSTNPFGQ----SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 298
           FG  + FG     S +S FG  S + FG  SGF    + ++ FG  ++ FG+ +G  S  
Sbjct: 85  FGGGSGFGGGSGISGSSGFGGGSGSGFGGGSGF----SGSSGFGGGSSGFGSGSGGRSGV 140

Query: 299 GATSSTAGA 325
                ++G+
Sbjct: 141 SGGGLSSGS 149

---

>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9|
          Length = 3178

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 20/63 (31%), Positives = 31/63 (49%)
 Frame = +2

Query: 134  GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 313
            G T   G ++  + G    +     SG GQ+ST +   GS TTA G+ +G +S  G+   
Sbjct: 1118 GGTGSGGSATTLSTGDAVRSTTSG-SGSGQSSTGSGAGGSGTTASGSGSGGSSGTGSDGV 1176

Query: 314  TAG 322
             +G
Sbjct: 1177 NSG 1179

---

>SEC9_DEBHA (Q6BKU3) Protein transport protein SEC9|
          Length = 490

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSG---FGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 307
           +TNP+G  S  A     +   GA S     G  +T TNP+G    +  A     +P+G  
Sbjct: 100 TTNPYGSRSERANNPYGNGNVGASSRGERAGGRNTQTNPYGGARASGRASGSKPNPYGGV 159

Query: 308 SS 313
            +
Sbjct: 160 QN 161

---

>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 18/69 (26%), Positives = 34/69 (49%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
           ST+P   S++S+   TSS+     S    TS ++    S  T+  + + +TS    ++S+
Sbjct: 197 STSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSS 256

Query: 317 AGAFGQPSA 343
           +     PS+
Sbjct: 257 SSTSTSPSS 265



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFG---AQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 307
           ST+P   S++S+   TSS+      + +    +ST+T+P  + T++    T  +S   + 
Sbjct: 225 STSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSA 284

Query: 308 SSTA 319
           SST+
Sbjct: 285 SSTS 288



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/69 (23%), Positives = 34/69 (49%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
           ST+    S++S+   TS +     S    TS+++      +T+  + + +TSP   ++S+
Sbjct: 211 STSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSS 270

Query: 317 AGAFGQPSA 343
           +     PS+
Sbjct: 271 SSTSTSPSS 279



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGT----TSPFGA 304
           ST+    S++++   TS++P  + +    +ST+T+P    T+A    T +    TSP   
Sbjct: 244 STSTSQSSTSTSSSSTSTSP--SSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLT 301

Query: 305 TSSTAGAFGQPSA 343
           +SS   A   PS+
Sbjct: 302 SSSPTLASTSPSS 314



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
           ST+P   S++ +   TSS      S    +S++T+   S T+   + T T+S   +TSS+
Sbjct: 190 STSPSSTSTSPSSTSTSS------SSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSS 243

Query: 317 AGAFGQPS 340
           + +  Q S
Sbjct: 244 STSTSQSS 251

---

>FBSH_MOUSE (Q8R089) Probable fibrosin-1 long transcript protein|
          Length = 378

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
 Frame = +2

Query: 140 TNPFGQSSASAFGQTSSNPF----GAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA- 304
           ++P    +A+     ++NPF    GA   F   ST  +PFG PT+       +   FG  
Sbjct: 47  SHPASLFTATGAVHAAANPFTTAPGAHGPFLSPSTHIDPFGRPTSFASLAALSNGAFGGL 106

Query: 305 ---TSSTAGAFGQPSAP 346
              T +++  F Q  +P
Sbjct: 107 GSPTFNSSAVFAQKESP 123



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/56 (35%), Positives = 27/56 (48%)
 Frame = +2

Query: 176 GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSA 343
           GQ  S+P    +  G    A NPF   TTA GA      PF + S+    FG+P++
Sbjct: 43  GQELSHPASLFTATGAVHAAANPF---TTAPGAH----GPFLSPSTHIDPFGRPTS 91

---

>SSB_COREF (Q8FLP9) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 232

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFG----QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG 301
           G    FG +    FG        NP G Q GFGQ           T  FG Q G    FG
Sbjct: 125 GGQGGFGGNQGGGFGGQGGNQGGNPGGGQGGFGQN----------TGGFGGQQGNQGGFG 174

---

>MSA2_PLAF1 (P50496) Merozoite surface antigen 2 precursor (MSA-2)|
          Length = 286

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 337
           + A A G   S    + S  G  S + +       A G+ +G+    G+ S +AGA G P
Sbjct: 54  AGAGASGSAGSGDGASGSASGSASGSAS---GSAGASGSASGSAGASGSASGSAGAEGSP 110

Query: 338 SAP 346
           S P
Sbjct: 111 STP 113



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 313
           GS +     SAS     S +  G+    G  S +    GSP+T     T TT+   A +S
Sbjct: 70  GSASGSASGSASGSAGASGSASGSAGASGSASGSAGAEGSPSTP-ATTTTTTTTNDAEAS 128

Query: 314 TAGAFGQPS 340
           T+ +   P+
Sbjct: 129 TSTSSENPN 137

---

>FBSH_HUMAN (Q9HAH7) Probable fibrosin-1 long transcript protein|
          Length = 372

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
 Frame = +2

Query: 140 TNPFGQSSASAFGQTSSNPF----GAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA- 304
           ++P    +A+     ++NPF    GA   F   ST  +PFG PT+       +   FG  
Sbjct: 47  SHPASLFTATGAVHAAANPFTAAPGAHGPFLSPSTHIDPFGRPTSFASLAALSNGAFGGL 106

Query: 305 ---TSSTAGAFGQPSAP 346
              T ++   F Q  +P
Sbjct: 107 GSPTFNSGAVFAQKESP 123

---

>YI94_SCHPO (Q9UT55) Protein C806.04c|
          Length = 440

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -2

Query: 276 CAPKAVVGLPKGLVAVLVWPNPDWAPKG---LLEVCPKA 169
           C    VVGLP GL   +    P W   G   ++E CPKA
Sbjct: 402 CKADVVVGLPDGLYEKIAKDLPHWERTGKYAVVEFCPKA 440

---

>MCM3A_HUMAN (O60318) 80 kda MCM3-associated protein (GANP protein)|
          Length = 1980

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
 Frame = +2

Query: 140 TNPFGQSSASAFGQTSSN----------PFGAQSGFGQTSTATNPFG--SPTTAFGAQTG 283
           TNPF     SAF  +SSN           FG  S FGQ ST +      S  ++F A +G
Sbjct: 4   TNPFSGQQPSAFSASSSNVGTLPSKPPFRFGQPSLFGQNSTLSGKSSGFSQVSSFPASSG 63

Query: 284 TT 289
            +
Sbjct: 64  VS 65

---

>SMBT2_MOUSE (Q5DTW2) Scm-like with four MBT domains protein 2|
          Length = 938

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -2

Query: 285 VPVCAPKAV-VGLPKGLVAVLVWPNPDWAPKGLLEVCPKALAEDCPNG 145
           VP   P+ +  G+P+G+ A +    P+  P+G+ E  P+A+ E  P G
Sbjct: 717 VPAGVPEDIPAGIPEGIPASI----PESIPEGIPESLPEAIPESIPKG 760

---

>NG79_SCHPO (Q09793) Putative nucleoporin C22G7.09c|
          Length = 425

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/62 (30%), Positives = 27/62 (43%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 328
           FG +   +FG T +      +  G    ++N FG+ T     Q  T +  G    T GAF
Sbjct: 2   FGLNKTPSFGSTGTQNQNTGTSAGTGLFSSNTFGNNT-----QANTPASTGFGGVTGGAF 56

Query: 329 GQ 334
           GQ
Sbjct: 57  GQ 58

---

>ZN703_HUMAN (Q9H7S9) Zinc finger protein 703|
          Length = 590

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 304
           G SS S+   +SS+  G ++GF   S A  PF        A + ++SP G+
Sbjct: 171 GSSSVSSTSSSSSSSPGDKAGFRVPSAACPPFPPHGAPVSASSSSSSPGGS 221

---

>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2|
           precursor
          Length = 503

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT------AFGAQTGTTSPF 298
           ST+   ++S     +TS++     S    ++T+T    S TT      +  + T TTS  
Sbjct: 140 STSVSSKTSTKLDTKTSTSSSATHSSSSSSTTSTTTSSSETTTSSSSSSSSSSTSTTSTT 199

Query: 299 GATSSTAGAFGQPS 340
             TSST      PS
Sbjct: 200 STTSSTTSTSSSPS 213

---

>PRY1_YEAST (P47032) Protein PRY1 precursor (Pathogen related in Sc 1)|
          Length = 299

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 325
           +G+++ S    TSS          Q +T + P  + TT+  A T TTS   ATSS + +
Sbjct: 99  WGKTTDSTTTLTSSE--STSQSLAQATTTSTPAAASTTSTPAATTTTSQAAATSSASSS 155

---

>GUN1_USTMA (P54424) Endoglucanase 1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase 1) (Cellulase 1) (EG 1)
          Length = 393

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTAT---NPFGSPTTAFGAQTGTTSPFGA 304
           GS +  G + AS  G  +    G   G+GQ S      +  G  TT  G+ +G+ S   A
Sbjct: 283 GSGDASGGADASGAGGAAEGSQGQPEGYGQPSGGNDQGSSNGDATTGAGSGSGSDSGSTA 342

Query: 305 TSSTAGA 325
             S +GA
Sbjct: 343 NGSGSGA 349

---

>ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis|
           thaliana envelope membrane integrase) (Ath4)
           (ALBINO3-like protein 1)
          Length = 1013

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +2

Query: 188 SNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPS 340
           SN  G+ +G   TST+     SP    G+   T    G+  ST G  G PS
Sbjct: 386 SNSGGSGNGTNSTSTSGGGSPSPGGGSGSPPSTGGGSGSPPSTGGGGGSPS 436

---

>EP15_HUMAN (P42566) Epidermal growth factor receptor substrate 15 (Protein|
           Eps15) (AF-1p protein)
          Length = 896

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 25/90 (27%), Positives = 32/90 (35%), Gaps = 20/90 (22%)
 Frame = +2

Query: 131 FGSTNPFG----------------QSSASAFGQTSSNPFGAQSGFGQTSTAT----NPFG 250
           FG  +PFG                + S   F  +S++PF A +    TS  T    +PF 
Sbjct: 636 FGKIDPFGGDPFKGSDPFASDCFFRQSTDPFATSSTDPFSAANNSSITSVETLKHNDPFA 695

Query: 251 SPTTAFGAQTGTTSPFGATSSTAGAFGQPS 340
              T   A    T PF      A  FG  S
Sbjct: 696 PGGTVVAASDSATDPF------ASVFGNES 719

---

>NU159_YEAST (P40477) Nucleoporin NUP159 (Nuclear pore protein NUP159)|
          Length = 1460

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
 Frame = +2

Query: 137 STNPFG-QSSASAFGQTSSNPFGAQS---GFGQT-----STATNPFGSPTTAFGAQTGTT 289
           S+ PFG + + S   +T++  FG+ S   GF +      S  T  FG+  + F +Q G  
Sbjct: 685 SSTPFGTKPNTSTKPKTNAFDFGSSSFGSGFSKALESVGSDTTFKFGTQASPFSSQLGNK 744

Query: 290 SPFGA 304
           SPF +
Sbjct: 745 SPFSS 749



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPT---------TAFGAQTGTTSPFG 301
           FG  S  + G +S  P  + S FG+ S  T  FGS           +AFG  +  TS FG
Sbjct: 555 FGTPSFGS-GNSSVEPPASGSAFGKPSFGTPSFGSGNSSAEPPASGSAFGKPSFGTSAFG 613

Query: 302 ATSS 313
             SS
Sbjct: 614 TASS 617



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 15/72 (20%)
 Frame = +2

Query: 170 AFGQTSSNPFGAQSGFGQTSTATNPFGS---------PTTAFGAQTGTTSPFGATSS--- 313
           AFG  +  P  ++  FG+ S     FGS           +AFG  +  T  FG+ +S   
Sbjct: 509 AFGAIAKEPSTSEYAFGKPSFGAPSFGSGKSSVESPASGSAFGKPSFGTPSFGSGNSSVE 568

Query: 314 ---TAGAFGQPS 340
              +  AFG+PS
Sbjct: 569 PPASGSAFGKPS 580



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 328
           FG  S  + G +S+ P  + S FG+ S  T+ FG   TA   +T + S FG  +  + +F
Sbjct: 581 FGTPSFGS-GNSSAEPPASGSAFGKPSFGTSAFG---TASSNETNSGSIFGKAAFGSSSF 636

---

>MUC13_RAT (P97881) Mucin-13 precursor|
          Length = 547

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
 Frame = +2

Query: 134 GSTNPFGQSSASAF------GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 295
           G+T P G +S+         G +S  P G     G  ST T     PT +    +GTT P
Sbjct: 135 GTTQPPGGASSPTTTVTQPTGSSSQTP-GTTQPPGGASTPTTTVTQPTGSSSQTSGTTQP 193

Query: 296 FGATSST 316
            G  SS+
Sbjct: 194 PGGASSS 200



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 22/61 (36%), Positives = 28/61 (45%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 337
           S+AS    T+  P GA S    T+T T P GS +       GTT P G  S+      QP
Sbjct: 128 STASQTPGTTQPPGGASS---PTTTVTQPTGSSSQT----PGTTQPPGGASTPTTTVTQP 180

Query: 338 S 340
           +
Sbjct: 181 T 181



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +2

Query: 224 TSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPS 340
           TST T     PT+      GTT P G  SS      QP+
Sbjct: 116 TSTPTTTATQPTSTASQTPGTTQPPGGASSPTTTVTQPT 154

---

>FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 231

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA-QTGTTSPFGATSS 313
           S     +++ S   +TS    G  S FG T    NPFG    +  A  +G  +  G + +
Sbjct: 77  SATSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGDRATKGDSKA 136

Query: 314 TAG 322
           T G
Sbjct: 137 TQG 139

---

>NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)|
          Length = 522

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 14/77 (18%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQSGFGQTSTATNP----FGSPTTAFGAQT----------GTTSP 295
           ++ S FG  SSN   A S    +S  T P    FG  TT+    T           T  P
Sbjct: 109 ANPSGFGLGSSNLTNAISSTVTSSQGTAPTGFVFGPSTTSVAPATTSGGFSFTGGSTAQP 168

Query: 296 FGATSSTAGAFGQPSAP 346
            G    +AG   QP+AP
Sbjct: 169 SGFNIGSAGNSAQPTAP 185

---

>API_ACHLY (P15636) Protease 1 precursor (EC 3.4.21.50) (Protease I) (API)|
           (Lysyl endopeptidase)
          Length = 653

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGT---TSPFGA 304
           G T  F  SS  + G  +S  +    G G TSTATNP      A G  T T   T   GA
Sbjct: 487 GLTATFTDSSTDSDGSIASRSWNF--GDGSTSTATNP-SKTYAAAGTYTVTLTVTDNGGA 543

Query: 305 TSSTAGAFGQPSAP 346
           T++  G+      P
Sbjct: 544 TNTKTGSVTVSGGP 557

---

>HRPA1_XANCV (P80151) Hypersensitivity response secretion protein hrpA1|
           precursor
          Length = 607

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGT----TSPF 298
           FG   P G  S++ FG  +    G  SG           G P++ FG  + +     SP 
Sbjct: 238 FGRVQPIGGGSSNTFGNAAQGQGGGASGI---------LGLPSSWFGGASSSDRVPVSPP 288

Query: 299 GATSSTAGAFGQPSA 343
              S  A A G P++
Sbjct: 289 LPGSGAAAAAGSPAS 303

---

>HRBL_HUMAN (O95081) HIV-1 Rev-binding protein-like protein (Rev/Rex activation|
           domain-binding protein-related) (RAB-R)
          Length = 481

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +2

Query: 155 QSSASAFGQTSSNPFGAQSGFGQTSTATNPF--GSPTTAFGAQTGTTSPF 298
           Q + S+FG   S   G +        +TNPF  G  ++ F ++  TT+PF
Sbjct: 431 QQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTTNPF 480

---

>PUM2_HUMAN (Q8TB72) Pumilio homolog 2 (Pumilio-2)|
          Length = 1066

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +2

Query: 131 FGSTNPFGQS-SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 307
           +GS++    S S+S F      P     GFG  ++     GS  + FG+  G+++   AT
Sbjct: 524 YGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSAT 583

---

>NUPL2_PONPY (Q5RB98) Nucleoporin-like 2|
          Length = 423

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
 Frame = +2

Query: 149 FGQSSASAF--------GQTSSNP----FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 292
           FG S A+ F          +S N     F   SGF   S+ +      + AFGA   T+S
Sbjct: 220 FGSSQAATFVSPGFPVNNSSSDNAQNFSFKTNSGFAAASSGSPAGFRSSPAFGAAASTSS 279

Query: 293 PFGATSSTAGAFGQP 337
              +TS+ A  FG+P
Sbjct: 280 AI-STSAPAFGFGKP 293

---

>NUPL2_HUMAN (O15504) Nucleoporin-like 2 (NLP-1) (hCG1) (NUP42 homolog)|
          Length = 423

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
 Frame = +2

Query: 149 FGQSSASAF--------GQTSSNP----FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 292
           FG S A+ F          +S N     F   SGF   S+ +      + AFGA   T+S
Sbjct: 220 FGSSQAATFMSPGFPVNNSSSDNAQNFSFKTNSGFAAASSGSPAGFGSSPAFGAAASTSS 279

Query: 293 PFGATSSTAGAFGQP 337
              +TS+ A  FG+P
Sbjct: 280 GI-STSAPAFGFGKP 293

---

>HMB1_STRPU (P13545) Homeobox protein HB1 (SPHBOX1)|
          Length = 308

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
 Frame = +2

Query: 161 SASAFGQTSSNPFGAQSGFGQTSTATNPFG------SPTTAFGAQTGTTSPFGATSSTAG 322
           +A+ +G  + + F   +G+G  ST +  +G      SPT+A+ ++   T    +  STA 
Sbjct: 69  AATFYGGGTLSNFSTTAGYGDHSTTSAGYGSMSQPISPTSAWDSRMAATYNSASWGSTAA 128

Query: 323 AFGQPS 340
             G  S
Sbjct: 129 ELGDGS 134

---

>FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 231

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +2

Query: 155 QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA-QTGTTSPFGATSSTAG 322
           +++ S   +TS    G  S FG T    NPFG    +  A  +G  +  G + +T G
Sbjct: 83  KNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGDRATKGDSKATQG 139

---

>K2C6C_HUMAN (P48666) Keratin, type II cytoskeletal 6C (Cytokeratin-6C) (CK 6C)|
           (K6c keratin)
          Length = 563

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQS-----GFGQTSTATNPFGSPTTAFGAQTGTTSPF--GAT 307
           FG  S    G +     G  S     G+G  + A+  FG   + FG   G    F  G  
Sbjct: 55  FGSRSLYGLGGSKRISIGGGSCAISGGYGSRARASYGFGGAGSGFGFGGGAGIGFDLGGG 114

Query: 308 SSTAGAFGQPSAP 346
           +  AG FG P  P
Sbjct: 115 AGLAGGFGGPGFP 127

---

>EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 15 (Protein|
           Eps15) (AF-1p protein)
          Length = 897

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 310
           FG  +PFG           S+PF +   F QTST  +PF          T +T PF A+S
Sbjct: 636 FGKIDPFGGDPFKG-----SDPFASDCFFKQTST--DPF---------TTSSTDPFSASS 679

Query: 311 STA 319
           +++
Sbjct: 680 NSS 682

---

>NUP1_YEAST (P20676) Nucleoporin NUP1 (Nuclear pore protein NUP1)|
          Length = 1076

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
 Frame = +2

Query: 188  SNPFGAQSGFGQTSTATNPF-------GSPTTAFGAQTGTTSPFGATSSTAGAFG 331
            S+ FGA +  G  S  TNP        G PTT+FG      +  G  ++   + G
Sbjct: 1005 SDIFGANAASGSNSNVTNPSSIFGGAGGVPTTSFGQPQSAPNQMGMGTNNGMSMG 1059

---

>CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-)|
          Length = 442

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG 283
           GQS+ S  GQTS++   + SG G  S + +  GS + A  A +G
Sbjct: 356 GQSTGSQSGQTSASGQASASGSGSGSGSGSGSGSGSGAVEASSG 399



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG 283
           G T+  GQ+SAS  G  S +  G+ SG G    ++  +     ++G   G
Sbjct: 364 GQTSASGQASASGSGSGSGSGSGSGSGSGAVEASSGNYWIVKNSWGTSWG 413

---

>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi|
          Length = 700

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
           ST+  G SS S+   +   P    +  G T + +NP  + +      TG+ +P GA +  
Sbjct: 238 STSTNGNSSTSS---SVEQPTSGLTPAGGTVSTSNPDAAASGGASTATGSKAPSGAVTIR 294

Query: 317 AGAFG 331
            GA G
Sbjct: 295 VGAQG 299

---

>PYRD_HALMA (Q5UYF1) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 350

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +2

Query: 161 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 292
           +  AFG T  NP G  +GF + +T      S    F    G T+
Sbjct: 51  AVEAFGHTFDNPVGVAAGFDKNATIPETLASLGFGFAEVGGVTA 94

---

>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1|
           (Eps15-related protein) (Eps15R)
          Length = 864

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFG----AQTGTTSPF 298
           F S++PF  SS S+ G   S+PFG    FG         GS  +A G    +Q     P 
Sbjct: 705 FESSDPFSSSSVSSKG---SDPFGTLDPFGS--------GSFNSAEGFADFSQMSKPPPS 753

Query: 299 GATSSTAGAFGQPSAP 346
           G  +S+ G  G    P
Sbjct: 754 GPFTSSLGGAGFSDDP 769

---

>PHXR5_MOUSE (P08399) Per-hexamer repeat protein 5|
          Length = 672

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQ---TSTATNPFGSPTTAFGAQTGTTSPFGA 304
           G+ +  G  + +  G  S    G  SG G    T TAT       T  G  TGT +  G+
Sbjct: 328 GTGSGSGTGTGTGTGSGSGTGTGTGSGSGTAKVTGTATGTGTGTDTGTGTGTGTGTGTGS 387

Query: 305 TSSTAGAFG 331
            S TA   G
Sbjct: 388 GSGTAKVTG 396

---

>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 337
           SSAS     SS+P  + +    +S+A +   S + A  + + + S   + SS+A +   P
Sbjct: 448 SSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAP 507

Query: 338 SA 343
           S+
Sbjct: 508 SS 509

---

>PUM1_HUMAN (Q14671) Pumilio homolog 1 (Pumilio-1) (HsPUM)|
          Length = 1186

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 292
           S N   QSS S F Q S+ P     GFG +S+     GS    FG     ++
Sbjct: 650 SLNSNSQSS-SLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSN 700

---

>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4|
           precursor
          Length = 605

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/69 (31%), Positives = 30/69 (43%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
           S+ P   SSA     T+S+   + S    TS++     S TT       TTSP  A SST
Sbjct: 240 SSTPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNTTPTSTTFTTTSPSTAPSST 299

Query: 317 AGAFGQPSA 343
              +   +A
Sbjct: 300 TVTYTSTTA 308



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA--QTGTTSPFGATS 310
           ST+    ++ S    TS+      S    TST+++   +PTT   A   T TTS    ++
Sbjct: 204 STSSSTSTTVSVTSSTSTTTSTTSSTLISTSTSSSSSSTPTTTSSAPISTSTTSSTSTST 263

Query: 311 ST 316
           ST
Sbjct: 264 ST 265

---

>DPOL_ASFL6 (P43139) DNA polymerase (EC 2.7.7.7)|
          Length = 1244

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 143  NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT 262
            NP G  + +  G  + NP G  +G    + A NP G+P +
Sbjct: 1083 NPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAS 1122



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 143  NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSP 256
            NP G  + +  G  + NP G  +G    + A NP G+P
Sbjct: 1079 NPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNP 1116



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 143  NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSP 256
            NP G  + +  G  + NP G  +G    + A NP G+P
Sbjct: 1075 NPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNP 1112



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 143  NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSP 256
            NP G  + +  G  + NP G  +G    + A NP G+P
Sbjct: 1071 NPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNP 1108

---

>MUCSM_CANFA (P83762) Submaxillary mucin (CSM) (Fragment)|
          Length = 89

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 21/64 (32%), Positives = 27/64 (42%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 331
           G  +ASA G T     G  +  G  ST  +  G+P T    + GTT    +  S  G  G
Sbjct: 24  GSPTASARGGTPGGSEGFTAAPGSESTGGHS-GAPGTTLAGRAGTTLGPRSEPSGTGVGG 82

Query: 332 QPSA 343
            P A
Sbjct: 83  SPVA 86

---

>K1C3_XENLA (P05782) Keratin, type I cytoskeletal 47 kDa (Fragment)|
          Length = 280

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 331
           G    S++G  SS+ FG   G G        FG     +GA  G  +  G +SS++G FG
Sbjct: 19  GGGFGSSYGGGSSSSFGGGYGAG--------FGG---GYGAGFGGGASSGFSSSSSGGFG 67

Query: 332 QPSA 343
             +A
Sbjct: 68  AAAA 71

---

>P53_MOUSE (P02340) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 390

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 169 RFWADL*QPFRSPIRV----RPDQHRHQSLRQPDHRLRCADGDHLA 294
           + W     P  S +R     +  QH  + +R+  H  RC+DGD LA
Sbjct: 141 QLWVSATPPAGSRVRAMAIYKKSQHMTEVVRRCPHHERCSDGDGLA 186

---

>ILF3_MOUSE (Q9Z1X4) Interleukin enhancer-binding factor 3|
          Length = 898

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = +2

Query: 131  FGSTNPFGQSSASAFGQTSSNPF--GAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 304
            F  +   G+S  +++G + S+ +  G+  G+G  S  ++ +      + +Q+  +SP G+
Sbjct: 809  FNYSGSGGRSGGNSYGSSGSSSYNTGSHGGYGTGSGGSSSYQGKQGGYSSQSNYSSP-GS 867

Query: 305  TSSTAG 322
            + S +G
Sbjct: 868  SQSYSG 873

---

>CPO_DROME (Q01617) Protein couch potato|
          Length = 738

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 313
           +SA+A   T+ +P G+ +    T+TAT        A  A TGT +    + S
Sbjct: 354 NSATASAPTTPSPAGSVTSAAPTATATAAAAGSAAATAAATGTPATSAVSDS 405

---

>SSB_BACAN (Q81JI3) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 172

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +2

Query: 155 QSSASAFGQTSSNPFGAQSGFGQTSTATN 241
           Q S + FG  SSNPFG  S  G      N
Sbjct: 118 QPSGAGFGNQSSNPFGQSSNSGNQGNQGN 146

---

>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)|
           (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD
           box protein p72)
          Length = 650

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = +2

Query: 155 QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQ 334
           + SAS   ++ ++  G  +G G        +GSP +AFGAQ G  + +G  +  A A+G 
Sbjct: 518 RDSASYRDRSETDRAGYANGSG--------YGSPNSAFGAQAGQYT-YGQGTYGAAAYGT 568

Query: 335 PS 340
            S
Sbjct: 569 SS 570

---

>MUCS_BOVIN (P98091) Submaxillary mucin-like protein|
          Length = 563

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 224 TSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 328
           T T T+   S  T  G QTG T     T+S+ G F
Sbjct: 176 TETTTSRHSSDATGSGIQTGITGTGSGTTSSPGGF 210

---

>KAPR_TRIAT (Q86ZN7) cAMP-dependent protein kinase regulatory subunit (PKA|
           regulatory subunit)
          Length = 462

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 173 FGQTSSNP-FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 313
           F  + +NP FG  S     S  ++PFG+    FG  +   +PFG ++S
Sbjct: 59  FPPSPTNPHFGMMS-----SQFSSPFGANANPFGGSSSNPNPFGGSAS 101

---

>PUM1_MOUSE (Q80U78) Pumilio homolog 1|
          Length = 1189

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +2

Query: 161 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 292
           S+S F Q S+ P     GFG +S+     GS    FG     ++
Sbjct: 658 SSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSN 701

---

>P2RX1_MOUSE (P51576) P2X purinoceptor 1 (ATP receptor) (P2X1) (Purinergic|
           receptor)
          Length = 399

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 19/61 (31%), Positives = 24/61 (39%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 328
           F  +   A G  + NP G   G  Q  +   P  +   A G +TG   PF  T  T   F
Sbjct: 106 FIMTPQQAQGHCAENPEG---GICQDDSGCTPGKAERKAQGIRTGNCVPFNGTVKTCEIF 162

Query: 329 G 331
           G
Sbjct: 163 G 163

---

>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3511

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -2

Query: 300  PKGEVVPVCAPKAVVGLPKGLVAVLVWPNP-DWAPKGLLEVCPK 172
            P+  + P   PK VVG       VLV P P  WAP G +   PK
Sbjct: 2470 PERPLAPEARPKTVVGTGPPAKPVLVRPTPQSWAP-GSVAKAPK 2512

---

>YCFD_SCHPO (O94725) Protein C1393.13|
          Length = 442

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
 Frame = -2

Query: 306 VAPKGEVVPVCAPKA--VVGLPKGLVAVLVWPNPDWAPKG---LLEVCPK 172
           +A K  ++ +   KA  VVGL KG+   +   NP W   G   ++E CPK
Sbjct: 392 IAGKFNILALRTIKADVVVGLGKGVYEEIAKDNPHWERTGKYAVVEFCPK 441

---

>C3G_DROME (O77086) Guanine nucleotide-releasing factor 2 (CRK SH3-binding|
           GNRP)
          Length = 1571

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
 Frame = +2

Query: 134 GSTNPFGQ---SSASAFGQTSSNPFGAQSGF-----GQTSTATNPFGSPTTAFGAQTGTT 289
           G T   G+   ++AS  G+T+SN    +SGF      +TST T  +   ++   + + + 
Sbjct: 689 GGTGGAGEGVAAAASGDGETNSNRHSNESGFVSMREFRTSTQTTDYSVQSSTKSSSSNSE 748

Query: 290 SPFGATSSTA 319
             F  + STA
Sbjct: 749 IAFSISESTA 758

---

>CDSN_MACMU (Q5TM45) Corneodesmosin precursor|
          Length = 534

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
           G SS+S  G + S P       G + +     GS + + G+ TG++S   ++SST
Sbjct: 123 GASSSSQLGGSGSQP-------GSSGSQPGSSGSHSGSSGSNTGSSSSHSSSSST 170

---

>GSPD_XANCP (P29041) General secretion pathway protein D precursor|
          Length = 759

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 22/71 (30%), Positives = 28/71 (39%)
 Frame = +2

Query: 128 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 307
           +FG     G S  S       N  G  SG      +    GS + A G   G TS   + 
Sbjct: 350 VFGGRGNGGNSGPSLVPGGVVNMLGNNSGGADRDES---LGSSSGATGGDIGGTSNGSSQ 406

Query: 308 SSTAGAFGQPS 340
           S T+G+FG  S
Sbjct: 407 SGTSGSFGGSS 417

---

>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 630

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTA 265
           S++ +G SS+S  G  SSN  G  SG+   S  ++ +G+P+ +
Sbjct: 585 SSSNWGGSSSSGGGWGSSNN-GGYSGYSGRSNGSSSYGNPSAS 626

---

>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101|
          Length = 621

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
 Frame = +2

Query: 176 GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGT---TSPFGATSSTAGAFGQPSAP 346
           G     P G        S AT    SP TA  + TGT   T P  A S T+G    PSAP
Sbjct: 372 GSPGGMPVGPDGYHQPVSAAT--MASPLTAMSS-TGTPAVTPPSSAVSYTSGHSPSPSAP 428

---

>KRHB4_MOUSE (Q99M73) Keratin, type II cuticular Hb4 (Hair keratin, type II Hb4)|
           (65 kDa type II keratin)
          Length = 603

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 8/77 (10%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTS-------SNPFGAQSGFGQTSTATNPFGSPT-TAFGAQTGT 286
           F     FG  S   FG +S       S P     GFG  S     FGS     F A +G 
Sbjct: 44  FRGLGGFGSRSVINFGSSSPRIAVGCSRPVRCGVGFGAGSGMA--FGSGDGLGFRASSGV 101

Query: 287 TSPFGATSSTAGAFGQP 337
              FGA   T+  FG P
Sbjct: 102 GLGFGAGGCTSYGFGGP 118

---

>DZIP1_BRARE (Q7T019) Zinc finger protein Dzip1 (DAZ-interacting protein 1|
           homolog) (Iguana protein)
          Length = 898

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +2

Query: 140 TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 298
           ++P G  S++      S+P    S   Q+  A +    P T+ GA T    PF
Sbjct: 13  SDPPGTHSSAGIPSLLSSPQSQPSSGSQSRPAPSTMSGPLTSSGASTSIPPPF 65

---

>PYRD_PYRKO (Q5JHR7) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 302

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 261 VVGLPKGLVAVLVWPNPDWAPKGLLEV 181
           +V LP GL+  +  PNP W  KG LE+
Sbjct: 62  IVELPYGLINAMGLPNPGW--KGFLEM 86

---

>NUPL2_CHICK (Q5ZI22) Nucleoporin-like 2|
          Length = 413

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQTSSNPFGAQ----SGFGQTSTATNPFGSP---TTAFGAQTGTTS 292
           GS N    S+AS   +TS    G      SGFG ++ A +   +P   +    A TGT+ 
Sbjct: 282 GSGNSSAPSAASFSFKTSGTTSGCGTSGLSGFGSSAAANSSSTAPLPVSATPSAATGTSQ 341

Query: 293 PFGATSS---TAGAFGQ--PSAP 346
              +++S   TAGA G    SAP
Sbjct: 342 SGASSASAAQTAGASGHNVTSAP 364

---

>IASPP_MOUSE (Q5I1X5) RelA-associated inhibitor (Inhibitor of ASPP protein)|
           (Protein iASPP) (PPP1R13B-like protein)
           (NFkB-interacting protein 1)
          Length = 824

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
 Frame = +2

Query: 134 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT----AFGAQTGTTS-PF 298
           G+ +P G++ +   G       G  + F     A +P GSP      AF  + G +  P 
Sbjct: 148 GAGSPHGRAPSPRPGIGPVRQPGPSTPFDYLGRAGSPRGSPLAEGPQAFFPERGPSPRPP 207

Query: 299 GATSSTAGAFGQP 337
            A   TAG FG P
Sbjct: 208 AAAYDTAGTFGSP 220

---

>SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)|
          Length = 220

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/58 (29%), Positives = 31/58 (53%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 325
           G S+ ++ G +SSN  G+ SG G  S  ++   S   A  + +   S  G++SS++ +
Sbjct: 63  GSSAGNSSGSSSSNSSGS-SGIGSLSRNSSSSSSSQAAGSSSSRRVSADGSSSSSSAS 119

---

>HANG_DROME (Q9VXG1) Zinc finger protein hangover|
          Length = 1959

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 227 STATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 325
           +TAT P  + TT   A  GTTSP  A  + A A
Sbjct: 32  ATATQPGTTTTTVATASAGTTSPEAAIPTAATA 64

---

>CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog|
          Length = 319

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
           S NP    ++ A  QTS NP    +      T  NP   PT+    Q     P   TS  
Sbjct: 30  SENPPSPPTSPAAPQTSENPPSPPTSPAVPQTRENPPSPPTSPAAPQPRENPPSPPTSPA 89

Query: 317 A 319
           A
Sbjct: 90  A 90

---

>YES_XIPHE (P27447) Tyrosine-protein kinase Yes (EC 2.7.10.2) (p61-Yes)|
          Length = 543

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/51 (41%), Positives = 28/51 (54%)
 Frame = +2

Query: 152 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 304
           GQS A    Q +S+P  A S FG  S+   PFG  +T+F + T   +PF A
Sbjct: 40  GQSPAMKT-QNNSHPT-ALSPFGGVSSPMTPFGGASTSFTSVT-VNNPFPA 87

---

>GAR1_CANGA (Q6FSB0) H/ACA ribonucleoprotein complex subunit 1 (snoRNP protein|
           GAR1)
          Length = 222

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +2

Query: 200 GAQSGFGQTSTATNPFGS---PTTAFGAQTGTTSPFGATSSTAGAFG 331
           GA+ GFG    +   FG        FG + G+   FG    + G FG
Sbjct: 150 GARGGFGGRGGSRGGFGGRGGSRGGFGGRGGSRGGFGGRGGSRGGFG 196

---

>P2RX1_RAT (P47824) P2X purinoceptor 1 (ATP receptor) (P2X1) (Purinergic|
           receptor) (RP-2 protein)
          Length = 399

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/52 (32%), Positives = 21/52 (40%)
 Frame = +2

Query: 176 GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 331
           G  + NP G   G  Q  +   P  +   A G +TG   PF  T  T   FG
Sbjct: 115 GHCAENPEG---GICQDDSGCTPGKAERKAQGIRTGNCVPFNGTVKTCEIFG 163

---

>PGCA_RAT (P07897) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2124

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 179  QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAG 322
            + SSNP+  Q G  + S A    G  +T      GT+    AT  T+G
Sbjct: 1778 EVSSNPWTFQEGTREGSAAPEVSGESSTTSDIDAGTSGVPFATPMTSG 1825

---

>VLPC_MYCHR (P29230) Variant surface antigen C precursor (VLPC prolipoprotein)|
          Length = 160

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 182 TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 310
           + S+  G QSG    +T     GS T+  G Q+GTTS  G T+
Sbjct: 43  SGSSTSGDQSG----TTTGGHSGSGTSTSGGQSGTTSGSGTTT 81

---

>TODE_PSEPU (P13453) 3-methylcatechol 2,3-dioxygenase (EC 1.13.11.-)|
          Length = 290

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 188 SNPFG--AQSGFGQTSTATNPFGSPTTAFGAQTG 283
           ++PFG   +  +G T     PF SPT   G QTG
Sbjct: 106 TDPFGNRVEIYYGATELFERPFASPTGVSGFQTG 139

---

>SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-related protein C)|
          Length = 1094

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +2

Query: 146 PFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA 319
           P GQ++   FGQ       + +   Q    +  FGSP    G Q     P+G   ++A
Sbjct: 77  PCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQSFGSPLAPVGNQPPVLQPYGPPPTSA 134

---

>PYRD_ASHGO (Q75CE1) Dihydroorotate dehydrogenase, mitochondrial precursor (EC|
           1.3.3.1) (Dihydroorotate oxidase) (DHOdehase) (DHODase)
           (DHOD)
          Length = 444

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +2

Query: 128 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFG-AQTGTTSP 295
           MF   +P        FG+T SNP G  +G  +   A +  G   + FG  + GT +P
Sbjct: 99  MFDKDDPV--LKVEVFGKTMSNPIGCAAGLDKDGEAID--GIAQSGFGYVEIGTVTP 151

---

>GSPD2_DICD3 (Q01565) General secretion pathway protein D precursor (Pectic|
           enzymes secretion protein outD)
          Length = 710

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 155 QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
           +S +S+   +SS   G+ SG   +S++++  G     FG+  G+TS  G  + T
Sbjct: 309 RSGSSSNSNSSSGSSGSSSGSSSSSSSSSSMG-----FGSAFGSTSSSGGRTIT 357

---

>VGLX_EHV1B (P28968) Glycoprotein X precursor|
          Length = 797

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +2

Query: 158 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS---PFGATSSTAGAF 328
           ++A+    T+S+   A +    T+TA     + TTA      TT+     G+TS+T  + 
Sbjct: 216 TAATTTAATTSSATTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTSTTGAST 275

Query: 329 GQPSA 343
             PSA
Sbjct: 276 STPSA 280

---

>PYRD_DROME (P32748) Dihydroorotate dehydrogenase, mitochondrial precursor (EC|
           1.3.3.1) (Dihydroorotate oxidase) (DHOdehase)
          Length = 405

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 167 SAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFG-AQTGTTSP 295
           S FG+  SNP G  +GF + + A +  G     FG  + GT +P
Sbjct: 89  SFFGRMLSNPIGIAAGFDKNAEAVD--GLQDLGFGFIEVGTVTP 130

---

>P53_MACMU (P56424) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 393

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 169 RFWADL*QPFRSPIRV----RPDQHRHQSLRQPDHRLRCADGDHLA 294
           + W D   P  S +R     +  QH  + +R+  H  RC+D D LA
Sbjct: 144 QLWVDSTPPPGSRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA 189

---

>P53_MACFU (P61260) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 393

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 169 RFWADL*QPFRSPIRV----RPDQHRHQSLRQPDHRLRCADGDHLA 294
           + W D   P  S +R     +  QH  + +R+  H  RC+D D LA
Sbjct: 144 QLWVDSTPPPGSRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA 189

---

>P53_MACFA (P56423) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 393

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 169 RFWADL*QPFRSPIRV----RPDQHRHQSLRQPDHRLRCADGDHLA 294
           + W D   P  S +R     +  QH  + +R+  H  RC+D D LA
Sbjct: 144 QLWVDSTPPPGSRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA 189

---

>P53_CERAE (P13481) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 393

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 169 RFWADL*QPFRSPIRV----RPDQHRHQSLRQPDHRLRCADGDHLA 294
           + W D   P  S +R     +  QH  + +R+  H  RC+D D LA
Sbjct: 144 QLWVDSTPPPGSRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA 189

---

>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2132

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +2

Query: 179  QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAG 322
            + +SNP+  Q G  + S A    G  +T     TGT+    AT   +G
Sbjct: 1786 EVNSNPWTFQEGTREGSAAPEVSGESSTTSDIDTGTSGVPSATPMASG 1833

---

>C28A5_DROME (Q9V419) Probable cytochrome P450 28a5 (EC 1.14.-.-) (CYPXXVIIIA5)|
          Length = 505

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -2

Query: 261 VVGLPKGLVAVLVWPNPDWAPKGLLEVCPKALAEDCPN 148
           VVGL   L AVLVW    W  +G+    PK L  + PN
Sbjct: 12  VVGL---LYAVLVWNYDYWRKRGVPGPKPKLLCGNYPN 46

---

>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)|
           (Protein kinase A interference protein)
          Length = 376

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/69 (21%), Positives = 35/69 (50%)
 Frame = +2

Query: 137 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 316
           S+      S ++F  +S +   + S     S++++ F   +T+  +++ T+S   +TSS+
Sbjct: 86  SSTSIASISFTSFSFSSDSSTSSSSSASSDSSSSSSFSISSTSATSESSTSSTQTSTSSS 145

Query: 317 AGAFGQPSA 343
           +     PS+
Sbjct: 146 SSLSSTPSS 154

---

>K2C6E_HUMAN (P48668) Keratin, type II cytoskeletal 6E (Cytokeratin-6E) (CK 6E)|
           (K6e keratin) (Keratin K6h)
          Length = 563

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQS-----GFGQTSTATNPFGSPTTAFGAQTGTTSPFG--AT 307
           FG  S    G +     G  S     G+G  +  +  FG   + FG   G    FG    
Sbjct: 55  FGSRSLYGLGGSKRISIGGGSCAISGGYGSRAGGSYGFGGAGSGFGFGGGAGIGFGLGGG 114

Query: 308 SSTAGAFGQPSAP 346
           +  AG FG P  P
Sbjct: 115 AGLAGGFGGPGFP 127

---

>K2C6B_HUMAN (P04259) Keratin, type II cytoskeletal 6B (Cytokeratin-6B) (CK 6B)|
           (K6b keratin)
          Length = 563

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQS-----GFGQTSTATNPFGSPTTAFGAQTGTTSPFG--AT 307
           FG  S    G +     G  S     G+G  +  +  FG   + FG   G    FG    
Sbjct: 55  FGSRSLYGLGGSKRISIGGGSCAISGGYGSRAGGSYGFGGAGSGFGFGGGAGIGFGLGGG 114

Query: 308 SSTAGAFGQPSAP 346
           +  AG FG P  P
Sbjct: 115 AGLAGGFGGPGFP 127

---

>K2C6A_HUMAN (P02538) Keratin, type II cytoskeletal 6A (Cytokeratin-6A) (CK 6A)|
           (K6a keratin)
          Length = 563

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
 Frame = +2

Query: 149 FGQSSASAFGQTSSNPFGAQS-----GFGQTSTATNPFGSPTTAFGAQTGTTSPFG--AT 307
           FG  S    G +     G  S     G+G  +  +  FG   + FG   G    FG    
Sbjct: 55  FGSRSLYGLGGSKRISIGGGSCAISGGYGSRAGGSYGFGGAGSGFGFGGGAGIGFGLGGG 114

Query: 308 SSTAGAFGQPSAP 346
           +  AG FG P  P
Sbjct: 115 AGLAGGFGGPGFP 127

---

>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/58 (29%), Positives = 19/58 (32%)
 Frame = +2

Query: 173 FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAP 346
           F      P G   GF          G     FG + G     G    T GAFG+P  P
Sbjct: 362 FAGRPGGPGGGGGGFAGRPGGPGGGGGGRPGFGGRPGGP---GGRGGTQGAFGRPGGP 416

---

>KAPR_NEUCR (Q01386) cAMP-dependent protein kinase regulatory subunit (PKA|
           regulatory subunit)
          Length = 385

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/66 (30%), Positives = 27/66 (40%)
 Frame = +2

Query: 131 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 310
           FG+ NPFG S     G++ S P        +  T T+P             TT  FG  +
Sbjct: 10  FGNANPFGSS-----GRSESGPMHRLVEEDENDTITSP-------------TTPHFGVKN 51

Query: 311 STAGAF 328
           + A AF
Sbjct: 52  NAAPAF 57

---

>NUPL2_MOUSE (Q8CIC2) Nucleoporin-like 2 (NLP-1)|
          Length = 420

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = +2

Query: 185 SSNPFGAQSGFGQTSTATNPFGSPTTAFG---AQTGTTSPFGATSSTAGAFGQP 337
           S++ FG+   FG   +A +   S T AFG    +  + + F   S  A +F  P
Sbjct: 261 STSVFGSHPAFGAGPSAGSSISSSTPAFGLGKPEATSAASFSFKSPEASSFASP 314


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,035,950
Number of Sequences: 219361
Number of extensions: 704997
Number of successful extensions: 3404
Number of sequences better than 10.0: 146
Number of HSP's better than 10.0 without gapping: 2694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3218
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---