Clone Name | bastl22h01 |
---|---|
Clone Library Name | barley_pub |
>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06, complete sequence Length = 136143 Score = 301 bits (152), Expect = 1e-78 Identities = 218/240 (90%) Strand = Plus / Plus Query: 242 gtaggaattgtttggttcaagactgtcattcaagatgatgcagaggccattccgcccgga 301 |||||| ||| ||||||||||| | || |||||||||||||||||||| ||||| ||||| Sbjct: 46035 gtaggagttggttggttcaagaatttcgttcaagatgatgcagaggccgttccgtccgga 46094 Query: 302 ggagtactccttgaaggagactactcctcaccttggtggggcagctgcaggtgacaagct 361 |||||||||||||||||||||| |||||||||||||||| | |||||| ||||||||||| Sbjct: 46095 ggagtactccttgaaggagacttctcctcaccttggtggtggagctgctggtgacaagct 46154 Query: 362 caccaccacctatgacctggttgagcagatgcagtacctttatgttcgagtggtaaaagc 421 |||||||||||||||| ||||||||||||||||||| |||||||| || || |||||||| Sbjct: 46155 caccaccacctatgacttggttgagcagatgcagtatctttatgtccgggtagtaaaagc 46214 Query: 422 gaaggaacttccaagtaaggacctcactggaagttgtgacccgtatgttgaggtgaagct 481 ||||| |||||||| |||||| |||||||||| |||||||| ||||||||||||||||| Sbjct: 46215 taaggaccttccaagcaaggacatcactggaagctgtgacccatatgttgaggtgaagct 46274
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 301 bits (152), Expect = 1e-78 Identities = 218/240 (90%) Strand = Plus / Plus Query: 242 gtaggaattgtttggttcaagactgtcattcaagatgatgcagaggccattccgcccgga 301 |||||| ||| ||||||||||| | || |||||||||||||||||||| ||||| ||||| Sbjct: 17669277 gtaggagttggttggttcaagaatttcgttcaagatgatgcagaggccgttccgtccgga 17669336 Query: 302 ggagtactccttgaaggagactactcctcaccttggtggggcagctgcaggtgacaagct 361 |||||||||||||||||||||| |||||||||||||||| | |||||| ||||||||||| Sbjct: 17669337 ggagtactccttgaaggagacttctcctcaccttggtggtggagctgctggtgacaagct 17669396 Query: 362 caccaccacctatgacctggttgagcagatgcagtacctttatgttcgagtggtaaaagc 421 |||||||||||||||| ||||||||||||||||||| |||||||| || || |||||||| Sbjct: 17669397 caccaccacctatgacttggttgagcagatgcagtatctttatgtccgggtagtaaaagc 17669456 Query: 422 gaaggaacttccaagtaaggacctcactggaagttgtgacccgtatgttgaggtgaagct 481 ||||| |||||||| |||||| |||||||||| |||||||| ||||||||||||||||| Sbjct: 17669457 taaggaccttccaagcaaggacatcactggaagctgtgacccatatgttgaggtgaagct 17669516
>dbj|AK102476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I04, full insert sequence Length = 3254 Score = 301 bits (152), Expect = 1e-78 Identities = 218/240 (90%) Strand = Plus / Plus Query: 242 gtaggaattgtttggttcaagactgtcattcaagatgatgcagaggccattccgcccgga 301 |||||| ||| ||||||||||| | || |||||||||||||||||||| ||||| ||||| Sbjct: 392 gtaggagttggttggttcaagaatttcgttcaagatgatgcagaggccgttccgtccgga 451 Query: 302 ggagtactccttgaaggagactactcctcaccttggtggggcagctgcaggtgacaagct 361 |||||||||||||||||||||| |||||||||||||||| | |||||| ||||||||||| Sbjct: 452 ggagtactccttgaaggagacttctcctcaccttggtggtggagctgctggtgacaagct 511 Query: 362 caccaccacctatgacctggttgagcagatgcagtacctttatgttcgagtggtaaaagc 421 |||||||||||||||| ||||||||||||||||||| |||||||| || || |||||||| Sbjct: 512 caccaccacctatgacttggttgagcagatgcagtatctttatgtccgggtagtaaaagc 571 Query: 422 gaaggaacttccaagtaaggacctcactggaagttgtgacccgtatgttgaggtgaagct 481 ||||| |||||||| |||||| |||||||||| |||||||| ||||||||||||||||| Sbjct: 572 taaggaccttccaagcaaggacatcactggaagctgtgacccatatgttgaggtgaagct 631
>gb|AY104903.1| Zea mays PCO065532 mRNA sequence Length = 737 Score = 210 bits (106), Expect = 3e-51 Identities = 184/210 (87%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 272 caagatgatgcagaggccat---tccgcccggaggagtactccttgaaggagactactcc 328 ||||||||||||||| ||| |||| ||||||||||||||||||||||| || || || Sbjct: 485 caagatgatgcagagaccaccgctccgtccggaggagtactccttgaaggaaaccacacc 544 Query: 329 tcaccttggtggggcagctgcaggtgacaagctcaccaccacctatgacctggttgagca 388 |||||||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 545 tcaccttggtggtgcagctgctggtgacaagcttacaaccacctatgacctggttgagca 604 Query: 389 gatgcagtacctttatgttcgagtggtaaaagcgaaggaacttccaagtaaggacctcac 448 |||||||||||||||||| ||||||||||||| ||||||||| | | ||||| |||| Sbjct: 605 gatgcagtacctttatgtaagagtggtaaaagcaaaggaacttncgaactaggacatcac 664 Query: 449 tggaagttgtgacccgtatgttgaggtgaa 478 || |||||||| || |||||||||||||| Sbjct: 665 tgngagttgtgatccttatgttgaggtgaa 694
>ref|NM_104035.2| Arabidopsis thaliana unknown protein AT1G51570 mRNA, complete cds Length = 2513 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 357 aagctcaccaccacctatgacctggttgagcagatgcagtacctttatgttcgagtggta 416 |||||||| ||||| |||||||| || ||||| |||||||| || |||||||| || ||| Sbjct: 79 aagctcacaaccacatatgacctcgtcgagcaaatgcagtatctctatgttcgtgtcgta 138 Query: 417 aaagcgaaggaacttccaagtaaggacctcactggaagttgtgacccgtatgttgaggtg 476 || || || ||| | ||| |||| ||| | ||||| ||||||||||| || ||||| || Sbjct: 139 aaggctaaagaattaccaggtaaagacttaactggtagttgtgacccttacgttgaagtt 198 Query: 477 aagct 481 ||||| Sbjct: 199 aagct 203
>gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 BAC F19C24 genomic sequence, complete sequence Length = 124511 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 357 aagctcaccaccacctatgacctggttgagcagatgcagtacctttatgttcgagtggta 416 |||||||| ||||| |||||||| || ||||| |||||||| || |||||||| || ||| Sbjct: 121117 aagctcacaaccacatatgacctcgtcgagcaaatgcagtatctctatgttcgtgtcgta 121176 Query: 417 aaagcgaaggaacttccaagtaaggacctcactggaagttgtgacccgtatgttgaggtg 476 || || || ||| | ||| |||| ||| | ||||| ||||||||||| || ||||| || Sbjct: 121177 aaggctaaagaattaccaggtaaagacttaactggtagttgtgacccttacgttgaagtt 121236 Query: 477 aagct 481 ||||| Sbjct: 121237 aagct 121241
>gb|AC024261.6|AC024261 Arabidopsis thaliana chromosome 1 BAC F5D21 genomic sequence, complete sequence Length = 92652 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 357 aagctcaccaccacctatgacctggttgagcagatgcagtacctttatgttcgagtggta 416 |||||||| ||||| |||||||| || ||||| |||||||| || |||||||| || ||| Sbjct: 16137 aagctcacaaccacatatgacctcgtcgagcaaatgcagtatctctatgttcgtgtcgta 16196 Query: 417 aaagcgaaggaacttccaagtaaggacctcactggaagttgtgacccgtatgttgaggtg 476 || || || ||| | ||| |||| ||| | ||||| ||||||||||| || ||||| || Sbjct: 16197 aaggctaaagaattaccaggtaaagacttaactggtagttgtgacccttacgttgaagtt 16256 Query: 477 aagct 481 ||||| Sbjct: 16257 aagct 16261
>ref|NM_115650.2| Arabidopsis thaliana unknown protein AT3G57880 mRNA, complete cds Length = 2713 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 372 tatgacctggttgagcagatgcagtacctttatgttcgagtggtaaaagcgaaggaactt 431 |||||||| |||||||| |||||||| || |||||||| ||||| || || ||||| | Sbjct: 303 tatgaccttgttgagcaaatgcagtatctctatgttcgtgtggttaaggcaaaggagtta 362 Query: 432 ccaagtaaggacctcactggaagttgtgacccgtatgttgaggtgaagct 481 || | ||||| | ||||| ||||||||||| ||||||||||| ||||| Sbjct: 363 cctggcaaggatatgactggtagttgtgacccttatgttgaggttaagct 412
>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17 Length = 109016 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 372 tatgacctggttgagcagatgcagtacctttatgttcgagtggtaaaagcgaaggaactt 431 |||||||| |||||||| |||||||| || |||||||| ||||| || || ||||| | Sbjct: 28505 tatgaccttgttgagcaaatgcagtatctctatgttcgtgtggttaaggcaaaggagtta 28446 Query: 432 ccaagtaaggacctcactggaagttgtgacccgtatgttgaggtgaagct 481 || | ||||| | ||||| ||||||||||| ||||||||||| ||||| Sbjct: 28445 cctggcaaggatatgactggtagttgtgacccttatgttgaggttaagct 28396
>gb|AY120689.1| Arabidopsis thaliana AT3g57880/T10K17_90 mRNA, complete cds Length = 2322 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 372 tatgacctggttgagcagatgcagtacctttatgttcgagtggtaaaagcgaaggaactt 431 |||||||| |||||||| |||||||| || |||||||| ||||| || || ||||| | Sbjct: 94 tatgaccttgttgagcaaatgcagtatctctatgttcgtgtggttaaggcaaaggagtta 153 Query: 432 ccaagtaaggacctcactggaagttgtgacccgtatgttgaggtgaagct 481 || | ||||| | ||||| ||||||||||| ||||||||||| ||||| Sbjct: 154 cctggcaaggatatgactggtagttgtgacccttatgttgaggttaagct 203
>gb|AF375436.1| Arabidopsis thaliana AT3g57880/T10K17_90 mRNA, complete cds Length = 2714 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 372 tatgacctggttgagcagatgcagtacctttatgttcgagtggtaaaagcgaaggaactt 431 |||||||| |||||||| |||||||| || |||||||| ||||| || || ||||| | Sbjct: 303 tatgaccttgttgagcaaatgcagtatctctatgttcgtgtggttaaggcaaaggagtta 362 Query: 432 ccaagtaaggacctcactggaagttgtgacccgtatgttgaggtgaagct 481 || | ||||| | ||||| ||||||||||| ||||||||||| ||||| Sbjct: 363 cctggcaaggatatgactggtagttgtgacccttatgttgaggttaagct 412
>gb|AC157891.3| Medicago truncatula chromosome 7 BAC clone mte1-1i2, complete sequence Length = 154095 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 369 acctatgacctggttgagcagatgcagtacctttatgtt 407 ||||||||||| |||||||| |||||||| ||||||||| Sbjct: 89269 acctatgaccttgttgagcaaatgcagtatctttatgtt 89307
>ref|NM_100296.1| Arabidopsis thaliana unknown protein AT1G04150 mRNA, complete cds Length = 3039 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 367 ccacctatgacctggttgagcagatgcagtacctttatgtt 407 |||| ||||| || |||||||| |||||||||||||||||| Sbjct: 809 ccacttatgatctagttgagcaaatgcagtacctttatgtt 849
>gb|AC146704.8| Medicago truncatula clone mth2-107f11, complete sequence Length = 116591 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 369 acctatgacctggttgagcagatgcagtacctttatgttcgagtggtaaaagcgaag 425 ||||||||||| |||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 79246 acctatgaccttgttgagcagatgttttatctttatgtccgagtcgtgaaagcgaag 79190
>gb|AC002411.1|F20D22 Arabidopsis thaliana chromosome 1 BAC F20D22 sequence, complete sequence Length = 78259 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 367 ccacctatgacctggttgagcagatgcagtacctttatgtt 407 |||| ||||| || |||||||| |||||||||||||||||| Sbjct: 42439 ccacttatgatctagttgagcaaatgcagtacctttatgtt 42479
>ref|XM_468390.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3000 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 369 acctatgacctggttgagcagatgcagtacct 400 ||||| |||||||| ||||||||||||||||| Sbjct: 757 acctacgacctggtcgagcagatgcagtacct 788
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 369 acctatgacctggttgagcagatgcagtacct 400 ||||| |||||||| ||||||||||||||||| Sbjct: 34977570 acctacgacctggtcgagcagatgcagtacct 34977601
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 369 acctatgacctggttgagcagatgcagtacct 400 ||||| |||||||| ||||||||||||||||| Sbjct: 37911 acctacgacctggtcgagcagatgcagtacct 37942
>ref|XM_957463.1| Neurospora crassa OR74A hypothetical protein (NCU06294.1) partial mRNA Length = 9492 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 254 tggttcaagactgtcattcaag 275 |||||||||||||||||||||| Sbjct: 967 tggttcaagactgtcattcaag 988
>ref|XM_326148.1| Neurospora crassa OR74A hypothetical protein (NCU06294.1) partial mRNA Length = 9492 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 254 tggttcaagactgtcattcaag 275 |||||||||||||||||||||| Sbjct: 967 tggttcaagactgtcattcaag 988
>gb|AC105052.3| Homo sapiens BAC clone RP11-577H5 from 7, complete sequence Length = 186465 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 tggggcagctgcaggtgacaa 358 ||||||||||||||||||||| Sbjct: 61219 tggggcagctgcaggtgacaa 61239
>gb|AC004951.5| Homo sapiens PAC clone RP5-1022I14 from 7, complete sequence Length = 51993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 tggggcagctgcaggtgacaa 358 ||||||||||||||||||||| Sbjct: 22222 tggggcagctgcaggtgacaa 22202
>gb|AC101527.12| Mus musculus chromosome 15, clone RP23-191D20, complete sequence Length = 193390 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 attcaagatgatgcagaggcc 289 ||||||||||||||||||||| Sbjct: 128876 attcaagatgatgcagaggcc 128856
>gb|BC018908.2| Homo sapiens cDNA clone IMAGE:3959993 Length = 1023 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 tggggcagctgcaggtgacaa 358 ||||||||||||||||||||| Sbjct: 680 tggggcagctgcaggtgacaa 660
>gb|BC038185.1| Homo sapiens, clone IMAGE:4650783, mRNA Length = 1023 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 tggggcagctgcaggtgacaa 358 ||||||||||||||||||||| Sbjct: 680 tggggcagctgcaggtgacaa 660
>gb|AC150911.4| Pan troglodytes BAC clone CH251-489G13 from chromosome 7, complete sequence Length = 200337 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 tggggcagctgcaggtgacaa 358 ||||||||||||||||||||| Sbjct: 87913 tggggcagctgcaggtgacaa 87933
>gb|AC093668.4| Homo sapiens BAC clone RP11-514P8 from 7, complete sequence Length = 200771 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 tggggcagctgcaggtgacaa 358 ||||||||||||||||||||| Sbjct: 162334 tggggcagctgcaggtgacaa 162354
>gb|AC004084.1| Homo sapiens BAC clone CTB-158O17 from 7, complete sequence Length = 93273 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 tggggcagctgcaggtgacaa 358 ||||||||||||||||||||| Sbjct: 89287 tggggcagctgcaggtgacaa 89267
>gb|BC041025.1| Homo sapiens, clone IMAGE:3925788, mRNA Length = 1023 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 tggggcagctgcaggtgacaa 358 ||||||||||||||||||||| Sbjct: 680 tggggcagctgcaggtgacaa 660
>gb|AC108829.13| Mus musculus chromosome 3, clone RP23-159D18, complete sequence Length = 184470 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 31766 tggtggggcagctgcaggtg 31747
>gb|AC147806.5| Mus musculus chromosome 1, clone RP23-6O16, complete sequence Length = 229200 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 200977 tggtggggcagctgcaggtg 200958
>gb|AC139845.19| Mus musculus chromosome 15, clone RP23-310D3, complete sequence Length = 202913 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 133365 tggtggggcagctgcaggtg 133346
>gb|AC163041.3| Mus musculus BAC clone RP23-32K16 from chromosome 12, complete sequence Length = 254666 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 252563 tggtggggcagctgcaggtg 252582
>gb|AC139293.4| Mus musculus BAC clone RP24-381N4 from chromosome 8, complete sequence Length = 161248 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 41122 tggtggggcagctgcaggtg 41103
>gb|AC153148.4| Mus musculus BAC clone RP23-189N11 from chromosome 5, complete sequence Length = 229020 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 18149 tggtggggcagctgcaggtg 18130
>gb|AC102447.11| Mus musculus chromosome 7, clone RP24-206D20, complete sequence Length = 176911 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 151644 tggtggggcagctgcaggtg 151663
>gb|AC136746.15| Mus musculus chromosome 5, clone RP23-151C5, complete sequence Length = 195530 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 150978 tggtggggcagctgcaggtg 150959
>gb|AC163631.5| Mus musculus BAC clone RP23-147B15 from chromosome 13, complete sequence Length = 211368 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 121760 tggtggggcagctgcaggtg 121741
>gb|AC169083.1| Mus musculus chromosome 3, clone RP23-28D7, complete sequence Length = 215143 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 149853 tggtggggcagctgcaggtg 149872
>gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, complete sequence Length = 165714 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 caagatgatgcagaggccat 291 |||||||||||||||||||| Sbjct: 94427 caagatgatgcagaggccat 94408
>gb|AC101831.7| Mus musculus chromosome 15, clone RP24-491D12, complete sequence Length = 129818 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 55967 tggtggggcagctgcaggtg 55948
>gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, complete sequence Length = 210819 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 173168 tggtggggcagctgcaggtg 173149
>ref|XM_881296.1| PREDICTED: Bos taurus similar to leucine zipper domain protein, transcript variant 5 (LOC510492), mRNA Length = 556 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 394 tggtggggcagctgcaggtg 413
>ref|XM_881274.1| PREDICTED: Bos taurus similar to leucine zipper domain protein, transcript variant 4 (LOC510492), mRNA Length = 588 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 388 tggtggggcagctgcaggtg 407
>gb|AC125149.4| Mus musculus BAC clone RP24-354E17 from chromosome 1, complete sequence Length = 169725 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 29305 tggtggggcagctgcaggtg 29324
>gb|AC125052.4| Mus musculus BAC clone RP23-388L12 from chromosome 5, complete sequence Length = 217001 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 94494 tggtggggcagctgcaggtg 94513
>gb|AC123856.4| Mus musculus BAC clone RP23-341H24 from chromosome 1, complete sequence Length = 226881 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 23787 tggtggggcagctgcaggtg 23806
>gb|AC123654.9| Mus musculus chromosome 15, clone RP23-161D16, complete sequence Length = 182376 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 114643 tggtggggcagctgcaggtg 114662
>gb|AC140205.2| Mus musculus BAC clone RP24-344F2 from chromosome 8, complete sequence Length = 140215 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 99784 tggtggggcagctgcaggtg 99803 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 91524 tggtggggcagctgcaggtg 91543
>gb|AC140199.2| Mus musculus BAC clone RP23-480D7 from chromosome 9, complete sequence Length = 170896 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 50541 tggtggggcagctgcaggtg 50560
>gb|AC132270.3| Mus musculus BAC clone RP24-338C23 from chromosome 5, complete sequence Length = 145471 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 133653 tggtggggcagctgcaggtg 133634
>gb|AC132223.2| Mus musculus BAC clone RP24-553G3 from chromosome 7, complete sequence Length = 149254 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 84536 tggtggggcagctgcaggtg 84555
>gb|AC158220.4| Mus musculus chromosome 7, clone RP23-278M8, complete sequence Length = 189304 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 135037 tggtggggcagctgcaggtg 135018
>gb|AC164544.4| Mus musculus chromosome 1, clone RP24-163G4, complete sequence Length = 142689 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 67807 tggtggggcagctgcaggtg 67788
>gb|AC165280.3| Mus musculus chromosome 3, clone RP23-389C4, complete sequence Length = 201348 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 95243 tggtggggcagctgcaggtg 95262
>gb|AC119985.6| Mus musculus chromosome 5, clone RP24-502C10, complete sequence Length = 134739 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 78724 tggtggggcagctgcaggtg 78743
>gb|AC166290.7| Mus musculus BAC RP23-14P17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 242055 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 131119 tggtggggcagctgcaggtg 131138
>gb|AC123549.5| Mus musculus BAC clone RP24-91K17 from chromosome 6, complete sequence Length = 182759 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 181523 tggtggggcagctgcaggtg 181542
>gb|AC122224.4| Mus musculus BAC clone RP23-130L16 from chromosome 9, complete sequence Length = 200246 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 129241 tggtggggcagctgcaggtg 129222
>gb|AC080144.11| Mus musculus chromosome 6, clone RP23-237K24, complete sequence Length = 184091 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 109529 tggtggggcagctgcaggtg 109510
>gb|AC140428.3| Mus musculus BAC clone RP23-100P8 from chromosome 7, complete sequence Length = 218370 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 63194 tggtggggcagctgcaggtg 63213
>gb|AC135640.5| Mus musculus BAC clone RP23-362A12 from chromosome 7, complete sequence Length = 205974 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 53268 tggtggggcagctgcaggtg 53287
>gb|AC123850.3| Mus musculus BAC clone RP23-319K22 from chromosome 5, complete sequence Length = 200934 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 120135 tggtggggcagctgcaggtg 120154
>emb|CR847512.10| Zebrafish DNA sequence from clone DKEYP-13G11 in linkage group 9, complete sequence Length = 169581 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 attgttgattgcaaagccat 190 |||||||||||||||||||| Sbjct: 135609 attgttgattgcaaagccat 135628
>gb|AC099710.8| Mus musculus, clone RP23-366C6, complete sequence Length = 225122 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 63343 tggtggggcagctgcaggtg 63362
>gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome 18, complete sequence Length = 186726 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 68208 tggtggggcagctgcaggtg 68189
>gb|AC127351.3| Mus musculus BAC clone RP23-66K20 from chromosome 5, complete sequence Length = 238781 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 202977 tggtggggcagctgcaggtg 202996
>gb|AC127336.4| Mus musculus BAC clone RP23-161G2 from chromosome 7, complete sequence Length = 222059 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 197682 tggtggggcagctgcaggtg 197701
>gb|AC129322.3| Mus musculus BAC clone RP23-220F4 from chromosome 19, complete sequence Length = 182093 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 117344 tggtggggcagctgcaggtg 117325
>gb|AC121595.3| Mus musculus BAC clone RP23-299A12 from chromosome X, complete sequence Length = 214297 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 95459 tggtggggcagctgcaggtg 95440
>gb|AC127310.4| Mus musculus BAC clone RP23-297D6 from chromosome 7, complete sequence Length = 199980 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 33669 tggtggggcagctgcaggtg 33650
>gb|AC124530.4| Mus musculus BAC clone RP23-286D7 from chromosome 12, complete sequence Length = 174849 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 16922 tggtggggcagctgcaggtg 16903
>gb|AC125543.3| Mus musculus BAC clone RP23-360H5 from chromosome 12, complete sequence Length = 184081 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 43903 tggtggggcagctgcaggtg 43884
>gb|AC117259.3| Mus musculus BAC clone RP24-492O19 from chromosome 12, complete sequence Length = 145944 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 143888 tggtggggcagctgcaggtg 143869
>gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome 13, complete sequence Length = 186870 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 23205 tggtggggcagctgcaggtg 23186
>gb|AC127267.3| Mus musculus BAC clone RP23-401H14 from chromosome 6, complete sequence Length = 186704 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 152791 tggtggggcagctgcaggtg 152772
>gb|AC122276.4| Mus musculus BAC clone RP23-230D23 from 6, complete sequence Length = 169437 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 89940 tggtggggcagctgcaggtg 89959
>gb|AC121603.4| Mus musculus BAC clone RP23-310D9 from 18, complete sequence Length = 195555 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 144904 tggtggggcagctgcaggtg 144923
>gb|AC122857.2| Mus musculus BAC clone RP23-125A8 from 2, complete sequence Length = 221951 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 140990 tggtggggcagctgcaggtg 140971
>gb|AC108410.9| Mus musculus chromosome 7, clone RP23-480A17, complete sequence Length = 184780 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 112050 tggtggggcagctgcaggtg 112069
>gb|AC114569.7| Mus musculus chromosome 6, clone RP23-139J6, complete sequence Length = 179927 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 26199 tggtggggcagctgcaggtg 26180
>gb|AC115731.11| Mus musculus chromosome 16, clone RP23-184A15, complete sequence Length = 228467 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 136645 tggtggggcagctgcaggtg 136664
>gb|AC165350.3| Mus musculus BAC clone RP23-249A17 from chromosome 12, complete sequence Length = 227048 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 207971 tggtggggcagctgcaggtg 207990
>gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, complete sequence Length = 195549 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 48571 tggtggggcagctgcaggtg 48552
>emb|AL928734.9| Mouse DNA sequence from clone RP23-409P4 on chromosome 2, complete sequence Length = 113197 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 36788 tggtggggcagctgcaggtg 36769
>gb|AC162364.6| Mus musculus chromosome 15, clone RP24-117M19, complete sequence Length = 164862 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 132018 tggtggggcagctgcaggtg 131999
>gb|AC124599.4| Mus musculus chromosome UL clone RP23-24D13, complete sequence Length = 208587 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 193552 tggtggggcagctgcaggtg 193571
>gb|AC163742.4| Mus musculus BAC clone RP23-383K19 from chromosome 14, complete sequence Length = 199109 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 42488 tggtggggcagctgcaggtg 42469
>emb|AL591496.13| Mouse DNA sequence from clone RP23-384C18 on chromosome 11 Contains the 3' end of a novel gene, five novel genes, the Serpinf1 and Serpinf2 genes for serine (or cysteine) proteinase inhibitor, clade F) members 1 and 2, an H+ transporting mitochondrial F0 complex ATP synthase subunit c (subunit 9) isoform 1 (Atp5g1) pseudogene, the Prpf8 gene for pre-mRNA processing factor 8, the gene for the ortholog of human scavenger receptor class F member 1 SCARF1, the 5' end of the gene for novel protein similar to solute carrier family 43 member 1 Slc43a1 and seven CpG islands, complete sequence Length = 205633 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 9012 tggtggggcagctgcaggtg 9031
>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 267509 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ttgcaaagccattctgggga 198 |||||||||||||||||||| Sbjct: 94108 ttgcaaagccattctgggga 94127
>emb|AL929313.13| Mouse DNA sequence from clone RP23-101D13 on chromosome 4, complete sequence Length = 104026 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 72701 tggtggggcagctgcaggtg 72720
>gb|AC161116.4| Mus musculus BAC clone RP24-133P10 from chromosome 12, complete sequence Length = 158009 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 23466 tggtggggcagctgcaggtg 23447
>gb|AC160984.3| Mus musculus BAC clone RP23-260C12 from chromosome 14, complete sequence Length = 206110 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 46917 tggtggggcagctgcaggtg 46936
>gb|AC162925.4| Mus musculus BAC clone RP23-302D18 from chromosome 6, complete sequence Length = 225947 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 8280 tggtggggcagctgcaggtg 8261
>gb|AC161266.2| Mus musculus BAC clone RP23-231B13 from chromosome 13, complete sequence Length = 190192 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 127134 tggtggggcagctgcaggtg 127153
>gb|AC162311.7| Mus musculus 6 BAC RP23-81K19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 266441 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 37522 tggtggggcagctgcaggtg 37503
>gb|AC127346.4| Mus musculus BAC clone RP23-54F4 from chromosome 6, complete sequence Length = 203187 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 13502 tggtggggcagctgcaggtg 13483
>gb|AC152449.4| Mus musculus BAC clone RP24-560O24 from chromosome 7, complete sequence Length = 166134 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 156315 tggtggggcagctgcaggtg 156296
>gb|AC154802.3| Mus musculus BAC clone RP24-502O7 from chromosome 12, complete sequence Length = 164001 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 91773 tggtggggcagctgcaggtg 91754
>gb|U43661.1|XLU43661 Xenopus laevis transposon TXz.19 transposase pseudogene, partial cds Length = 1604 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gttcaagactgtcattcaag 275 |||||||||||||||||||| Sbjct: 1492 gttcaagactgtcattcaag 1511
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagctgcaggtgacaagct 361 |||||||||||||||||||| Sbjct: 12074595 gcagctgcaggtgacaagct 12074614
>gb|AC157092.6| Mus musculus 10 BAC RP24-397N4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 141291 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 102453 tggtggggcagctgcaggtg 102434
>gb|AC154322.1| Mus musculus BAC clone RP23-299P17 from chromosome 14, complete sequence Length = 182146 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 60880 tggtggggcagctgcaggtg 60899
>gb|AC122920.4| Mus musculus BAC clone RP23-33J11 from chromosome 8, complete sequence Length = 229472 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 44877 tggtggggcagctgcaggtg 44896
>gb|AC122311.6| Mus musculus BAC clone RP23-298B23 from chromosome 6, complete sequence Length = 209435 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 157915 tggtggggcagctgcaggtg 157934
>gb|AC175706.2| Mus musculus BAC clone RP24-307B22 from chromosome y, complete sequence Length = 186810 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 147215 tggtggggcagctgcaggtg 147196
>gb|AC124589.5| Mus musculus BAC clone RP23-133M13 from chromosome unknown, complete sequence Length = 209265 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 153332 tggtggggcagctgcaggtg 153313
>gb|AC134857.7| Mus musculus BAC clone RP23-336M11 from chromosome unknown, complete sequence Length = 200440 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 79319 tggtggggcagctgcaggtg 79338
>gb|AC140365.4| Mus musculus BAC clone RP24-221M24 from chromosome 5, complete sequence Length = 191473 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 54914 tggtggggcagctgcaggtg 54933
>gb|AC012147.7|AC012147 Mus musculus, clone RP23-191A4, complete sequence Length = 217034 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 168406 tggtggggcagctgcaggtg 168387
>gb|AC102544.14| Mus musculus chromosome 8, clone RP23-118B13, complete sequence Length = 224946 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 111719 tggtggggcagctgcaggtg 111700
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagctgcaggtgacaagct 361 |||||||||||||||||||| Sbjct: 179075 gcagctgcaggtgacaagct 179094
>emb|BX322590.10| Mouse DNA sequence from clone RP23-14B5 on chromosome X, complete sequence Length = 223699 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 15371 tggtggggcagctgcaggtg 15352
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagctgcaggtgacaagct 361 |||||||||||||||||||| Sbjct: 8974 gcagctgcaggtgacaagct 8993
>emb|AL672020.5| Mouse DNA sequence from clone RP23-185A3 on chromosome X, complete sequence Length = 200613 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 17117 tggtggggcagctgcaggtg 17136
>emb|BX548056.3| Mouse DNA sequence from clone RP23-240D4 on chromosome X, complete sequence Length = 110099 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 37906 tggtggggcagctgcaggtg 37925
>emb|BX547936.5| Mouse DNA sequence from clone RP23-109A11 on chromosome X, complete sequence Length = 70333 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 53585 tggtggggcagctgcaggtg 53604
>gb|AC124744.3| Mus musculus BAC clone RP23-223E16 from 13, complete sequence Length = 199767 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 135588 tggtggggcagctgcaggtg 135569
>emb|CT033781.12| Mouse DNA sequence from clone RP24-85H21 on chromosome 13, complete sequence Length = 206653 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 24326 tggtggggcagctgcaggtg 24345
>gb|AC134462.5| Mus musculus BAC clone RP23-391L12 from chromosome 12, complete sequence Length = 197870 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 190159 tggtggggcagctgcaggtg 190140
>gb|AC115689.22| Mus musculus chromosome 9, clone RP23-166A9, complete sequence Length = 221548 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 187383 tggtggggcagctgcaggtg 187402
>gb|AC171678.8| Mus musculus chromosome 8, clone RP24-104E12, complete sequence Length = 175681 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 128657 tggtggggcagctgcaggtg 128638
>dbj|AP001359.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-820L6, complete sequences Length = 221535 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 accctgagtaggaattgttt 254 |||||||||||||||||||| Sbjct: 220252 accctgagtaggaattgttt 220271
>dbj|AP000755.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-716H6, complete sequences Length = 152306 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 accctgagtaggaattgttt 254 |||||||||||||||||||| Sbjct: 49964 accctgagtaggaattgttt 49983
>gb|AC154010.3| Mus musculus 6 BAC RP24-493P16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 213098 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 132637 tggtggggcagctgcaggtg 132618
>emb|AL928914.15| Mouse DNA sequence from clone RP23-399J8 on chromosome 2, complete sequence Length = 199873 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 182548 tggtggggcagctgcaggtg 182529
>emb|CT033772.6| Mouse DNA sequence from clone RP23-144A16 on chromosome 17, complete sequence Length = 214867 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 28326 tggtggggcagctgcaggtg 28345
>gb|AC147256.3| Mus musculus BAC clone RP24-147G24 from 12, complete sequence Length = 170987 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 64436 tggtggggcagctgcaggtg 64455
>emb|CT030695.5| Mouse DNA sequence from clone RP23-259F10 on chromosome 9, complete sequence Length = 173589 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 150936 tggtggggcagctgcaggtg 150955
>gb|AC134584.5| Mus musculus BAC clone RP23-299M6 from 5, complete sequence Length = 212518 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 39731 tggtggggcagctgcaggtg 39712
>gb|AC130824.4| Mus musculus BAC clone RP23-349B5 from 12, complete sequence Length = 178133 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 148168 tggtggggcagctgcaggtg 148149
>gb|AC141562.4| Mus musculus BAC clone RP23-381N2 from 9, complete sequence Length = 190178 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 82271 tggtggggcagctgcaggtg 82252
>gb|AC122351.5| Mus musculus BAC clone RP23-388H1 from 12, complete sequence Length = 201060 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 184209 tggtggggcagctgcaggtg 184228
>gb|AC125463.4| Mus musculus BAC clone RP23-106G8 from 8, complete sequence Length = 212677 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 45652 tggtggggcagctgcaggtg 45671
>emb|BX005469.9| Mouse DNA sequence from clone RP23-218K9 on chromosome X, complete sequence Length = 121341 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 59430 tggtggggcagctgcaggtg 59449
>gb|AC165956.4| Mus musculus BAC clone RP23-437I5 from chromosome 13, complete sequence Length = 211774 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 72624 tggtggggcagctgcaggtg 72643
>gb|AC173050.1| Mus musculus BAC clone RP23-55I3 from chromosome 7, complete sequence Length = 266043 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 254518 tggtggggcagctgcaggtg 254537
>gb|AC172367.1| Mus musculus BAC clone RP23-342N5 from chromosome 7, complete sequence Length = 178231 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 8053 tggtggggcagctgcaggtg 8072
>emb|AL805908.10| Mouse DNA sequence from clone RP23-461P20 on chromosome 4, complete sequence Length = 127187 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 36933 tggtggggcagctgcaggtg 36914
>emb|AL732412.8| Mouse DNA sequence from clone RP23-114P13 on chromosome X, complete sequence Length = 142781 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 57104 tggtggggcagctgcaggtg 57085
>gb|AC146978.7| Mus musculus chromosome 7, clone RP24-217F6, complete sequence Length = 152682 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 91344 tggtggggcagctgcaggtg 91325
>emb|AL731695.11| Mouse DNA sequence from clone RP23-188M14 on chromosome X, complete sequence Length = 177098 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 148437 tggtggggcagctgcaggtg 148456
>gb|AC109618.12| Mus musculus chromosome 8, clone RP23-478L3, complete sequence Length = 173511 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 60165 tggtggggcagctgcaggtg 60146
>emb|AL670181.6| Mouse DNA sequence from clone RP23-216P24 on chromosome X, complete sequence Length = 166660 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 87663 tggtggggcagctgcaggtg 87682
>emb|AL844190.5| Mouse DNA sequence from clone RP23-425H15 on chromosome 4, complete sequence Length = 211151 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 176102 tggtggggcagctgcaggtg 176083
>emb|AL732470.7| Mouse DNA sequence from clone RP23-38D3 on chromosome X, complete sequence Length = 220069 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 50078 tggtggggcagctgcaggtg 50059
>emb|AL732454.12| Mouse DNA sequence from clone RP23-289P8 on chromosome X, complete sequence Length = 179447 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 88407 tggtggggcagctgcaggtg 88388
>gb|AC124606.3| Mus musculus BAC clone RP23-82D2 from chromosome unknown, complete sequence Length = 225720 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tggtggggcagctgcaggtg 354 |||||||||||||||||||| Sbjct: 210687 tggtggggcagctgcaggtg 210706 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,746,741 Number of Sequences: 3902068 Number of extensions: 3746741 Number of successful extensions: 103037 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102560 Number of HSP's gapped (non-prelim): 475 length of query: 481 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 459 effective length of database: 17,147,199,772 effective search space: 7870564695348 effective search space used: 7870564695348 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)