ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl22g11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478067.1| Oryza sativa (japonica cultivar-group), mRNA Length = 408 Score = 101 bits (51), Expect = 2e-18 Identities = 160/196 (81%), Gaps = 9/196 (4%) Strand = Plus / Plus Query: 66 gagggtggcggtggtcggcggcggggtgagtgggctggcggcggcgcacgagttgctcgc 125 ||||||||| ||||| |||| ||||||||| |||||||| || ||||||||| || Sbjct: 205 gagggtggcagtggtgggcgccggggtgagcgggctggctgccgcgcacgag------gc 258 Query: 126 cgccagcggcggaggcgacgtgcgtgtcaccctgtacgagcaggaggagagcctcggagg 185 || || ||||| |||| |||||| || || ||||||||| |||||| |||||||| || Sbjct: 259 ggcgaggggcggcggcggcgtgcgcgtgacgctgtacgagagggaggacagcctcggcgg 318 Query: 186 gcatgccaggacggtggccgtcgacgacggcgccggcggctgcgtcaacctcgacctcgg 245 ||| |||||||||||||||||||||| || ||||||| | ||| ||||||||||||| Sbjct: 319 gcacgccaggacggtggccgtcgacggcgacgccggcccc---gtcgacctcgacctcgg 375 Query: 246 cttcatgagcttcaac 261 |||||| ||||||| Sbjct: 376 attcatggtcttcaac 391
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 101 bits (51), Expect = 2e-18 Identities = 160/196 (81%), Gaps = 9/196 (4%) Strand = Plus / Plus Query: 66 gagggtggcggtggtcggcggcggggtgagtgggctggcggcggcgcacgagttgctcgc 125 ||||||||| ||||| |||| ||||||||| |||||||| || ||||||||| || Sbjct: 17044547 gagggtggcagtggtgggcgccggggtgagcgggctggctgccgcgcacgag------gc 17044600 Query: 126 cgccagcggcggaggcgacgtgcgtgtcaccctgtacgagcaggaggagagcctcggagg 185 || || ||||| |||| |||||| || || ||||||||| |||||| |||||||| || Sbjct: 17044601 ggcgaggggcggcggcggcgtgcgcgtgacgctgtacgagagggaggacagcctcggcgg 17044660 Query: 186 gcatgccaggacggtggccgtcgacgacggcgccggcggctgcgtcaacctcgacctcgg 245 ||| |||||||||||||||||||||| || ||||||| | ||| ||||||||||||| Sbjct: 17044661 gcacgccaggacggtggccgtcgacggcgacgccggcccc---gtcgacctcgacctcgg 17044717 Query: 246 cttcatgagcttcaac 261 |||||| ||||||| Sbjct: 17044718 attcatggtcttcaac 17044733 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gtgggctggcggcggcgcacg 115 ||||||||||||||||||||| Sbjct: 17795707 gtgggctggcggcggcgcacg 17795687 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cgtcgacgacggcgccggcg 223 |||||||||||||||||||| Sbjct: 28866756 cgtcgacgacggcgccggcg 28866737
>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0016H06 Length = 148158 Score = 101 bits (51), Expect = 2e-18 Identities = 160/196 (81%), Gaps = 9/196 (4%) Strand = Plus / Plus Query: 66 gagggtggcggtggtcggcggcggggtgagtgggctggcggcggcgcacgagttgctcgc 125 ||||||||| ||||| |||| ||||||||| |||||||| || ||||||||| || Sbjct: 123958 gagggtggcagtggtgggcgccggggtgagcgggctggctgccgcgcacgag------gc 124011 Query: 126 cgccagcggcggaggcgacgtgcgtgtcaccctgtacgagcaggaggagagcctcggagg 185 || || ||||| |||| |||||| || || ||||||||| |||||| |||||||| || Sbjct: 124012 ggcgaggggcggcggcggcgtgcgcgtgacgctgtacgagagggaggacagcctcggcgg 124071 Query: 186 gcatgccaggacggtggccgtcgacgacggcgccggcggctgcgtcaacctcgacctcgg 245 ||| |||||||||||||||||||||| || ||||||| | ||| ||||||||||||| Sbjct: 124072 gcacgccaggacggtggccgtcgacggcgacgccggcccc---gtcgacctcgacctcgg 124128 Query: 246 cttcatgagcttcaac 261 |||||| ||||||| Sbjct: 124129 attcatggtcttcaac 124144
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 62 ggatgagggtggcggtggtcggcggcggggtgagtgggctggcggcggcgcacgag 117 ||||||||||||||||||| |||| ||| || || ||||||||||||||||||||| Sbjct: 9528049 ggatgagggtggcggtggtgggcgccggagtaagcgggctggcggcggcgcacgag 9528104 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 atggagagatcagacatgtctttctc 338 |||||||||||||||||||| ||||| Sbjct: 9532707 atggagagatcagacatgtccttctc 9532732 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgacggcgccggcggctgcg 229 |||||||||||||||||||| Sbjct: 21589090 cgacggcgccggcggctgcg 21589109
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 62 ggatgagggtggcggtggtcggcggcggggtgagtgggctggcggcggcgcacgag 117 ||||||||||||||||||| |||| ||| || || ||||||||||||||||||||| Sbjct: 9527934 ggatgagggtggcggtggtgggcgccggagtaagcgggctggcggcggcgcacgag 9527989 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 atggagagatcagacatgtctttctc 338 |||||||||||||||||||| ||||| Sbjct: 9532592 atggagagatcagacatgtccttctc 9532617 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgacggcgccggcggctgcg 229 |||||||||||||||||||| Sbjct: 21517411 cgacggcgccggcggctgcg 21517430
>emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC OSJNBb0077C18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123766 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 62 ggatgagggtggcggtggtcggcggcggggtgagtgggctggcggcggcgcacgag 117 ||||||||||||||||||| |||| ||| || || ||||||||||||||||||||| Sbjct: 113273 ggatgagggtggcggtggtgggcgccggagtaagcgggctggcggcggcgcacgag 113328 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 atggagagatcagacatgtctttctc 338 |||||||||||||||||||| ||||| Sbjct: 117931 atggagagatcagacatgtccttctc 117956
>gb|AE004443.1| Pseudomonas aeruginosa PAO1, section 4 of 529 of the complete genome Length = 19372 Score = 46.1 bits (23), Expect = 0.090 Identities = 26/27 (96%) Strand = Plus / Plus Query: 221 gcggctgcgtcaacctcgacctcggct 247 |||||| |||||||||||||||||||| Sbjct: 6539 gcggcttcgtcaacctcgacctcggct 6565
>gb|AY623658.2| Aeromicrobium erythreum putative transcriptional repressor and putative dehydrogenase/reductase genes, complete cds; erythromycin biosynthesis gene cluster, complete sequence; putative oxidoreductase and LipN genes, complete cds; monoamine oxidase gene, partial cds; and unknown gene Length = 61845 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 204 cgtcgacgacggcgccggcggct 226 ||||||||||||||||||||||| Sbjct: 1872 cgtcgacgacggcgccggcggct 1850
>ref|XM_470552.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1620 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 66 gagggtggcggtggtcggcggcggggtgagtgggctggcggcggcg 111 |||||||||| | ||||||||||| | || ||||||||||||||| Sbjct: 75 gagggtggcgatcatcggcggcgggatcagcgggctggcggcggcg 120
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 66 gagggtggcggtggtcggcggcggggtgagtgggctggcggcggcg 111 |||||||||| | ||||||||||| | || ||||||||||||||| Sbjct: 4293038 gagggtggcgatcatcggcggcgggatcagcgggctggcggcggcg 4293083
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 66 gagggtggcggtggtcggcggcggggtgagtgggctggcggcggcg 111 |||||||||| | ||||||||||| | || ||||||||||||||| Sbjct: 4293153 gagggtggcgatcatcggcggcgggatcagcgggctggcggcggcg 4293198
>gb|AE005101.1| Halobacterium sp. NRC-1 section 132 of 170 of the complete genome Length = 12730 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 69 ggtggcggtggtcggcggcggggtga 94 |||||| ||||||||||||||||||| Sbjct: 7599 ggtggccgtggtcggcggcggggtga 7624
>dbj|AK069115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H02, full insert sequence Length = 2846 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 atggagagatcagacatgtctttctc 338 |||||||||||||||||||| ||||| Sbjct: 318 atggagagatcagacatgtccttctc 343
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 66 gagggtggcggtggtcggcggcggggtgagtgggctggcggcggcg 111 |||||||||| | ||||||||||| | || ||||||||||||||| Sbjct: 121653 gagggtggcgatcatcggcggcgggatcagcgggctggcggcggcg 121698
>gb|AC119670.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007H22, complete sequence Length = 160938 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 ggtggcggtggtcggcggcggggtg 93 |||||||||| |||||||||||||| Sbjct: 31021 ggtggcggtgctcggcggcggggtg 30997
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 201 ggccgtcgacgacggcgccggcggc 225 |||||||||||||| |||||||||| Sbjct: 80568 ggccgtcgacgacgacgccggcggc 80544
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 75 ggtggtcggcggcggggtgagtgggctggcggc 107 |||||| ||||||||| |||| ||||||||||| Sbjct: 1569222 ggtggtgggcggcgggctgagcgggctggcggc 1569254
>gb|AF365398.1| Drosophila melanogaster strain K9 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365397.1| Drosophila melanogaster strain K8 cramped (crm) gene, complete cds Length = 4074 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365396.1| Drosophila melanogaster strain K5 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365394.1| Drosophila melanogaster strain K3 cramped (crm) gene, complete cds Length = 4073 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365393.1| Drosophila melanogaster strain K2 cramped (crm) gene, complete cds Length = 4080 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365392.1| Drosophila melanogaster strain K11 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365391.1| Drosophila melanogaster strain K1 cramped (crm) gene, complete cds Length = 4068 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365390.1| Drosophila melanogaster strain wi8 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365389.1| Drosophila melanogaster strain wi7 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365388.1| Drosophila melanogaster strain wi5 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365387.1| Drosophila melanogaster strain wi4 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365386.1| Drosophila melanogaster strain wi28 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365385.1| Drosophila melanogaster strain wi27 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365384.1| Drosophila melanogaster strain wi2 cramped (crm) gene, complete cds Length = 4079 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365383.1| Drosophila melanogaster strain wi19 cramped (crm) gene, complete cds Length = 4085 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365382.1| Drosophila melanogaster strain wi18 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365381.1| Drosophila melanogaster strain wi16 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365380.1| Drosophila melanogaster strain wi14 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365379.1| Drosophila melanogaster strain wi13 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365378.1| Drosophila melanogaster strain wi12 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365377.1| Drosophila melanogaster strain wi10 cramped (crm) gene, complete cds Length = 4085 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365376.1| Drosophila melanogaster strain wi1 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365375.1| Drosophila melanogaster strain pe9 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365374.1| Drosophila melanogaster strain pe7 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365373.1| Drosophila melanogaster strain pe5 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365372.1| Drosophila melanogaster strain pe46 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365371.1| Drosophila melanogaster strain pe45 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365370.1| Drosophila melanogaster strain pe4 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365369.1| Drosophila melanogaster strain pe33 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365368.1| Drosophila melanogaster strain pe29 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365367.1| Drosophila melanogaster strain pe2 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365366.1| Drosophila melanogaster strain pe12 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365365.1| Drosophila melanogaster strain pe10 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AF365364.1| Drosophila melanogaster strain pe1 cramped (crm) gene, complete cds Length = 4086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 170 gacgacggcggcggcggctgcgtca 146
>gb|AE008862.1| Salmonella typhimurium LT2, section 166 of 220 of the complete genome Length = 22307 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gtgggctggcggcggcgcacg 115 ||||||||||||||||||||| Sbjct: 16316 gtgggctggcggcggcgcacg 16296
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ggtggcggtggtcggcggcgg 89 ||||||||||||||||||||| Sbjct: 138080 ggtggcggtggtcggcggcgg 138100
>emb|AL021728.1|DMC95B7 Drosophila melanogaster cosmid clone 95B7 Length = 45857 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 23075 gacgacggcggcggcggctgcgtca 23099
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 agttgctcgccgccagcggcg 136 ||||||||||||||||||||| Sbjct: 4788619 agttgctcgccgccagcggcg 4788599
>gb|AC104145.7| Drosophila melanogaster X BAC RP98-30B1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161569 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 77948 gacgacggcggcggcggctgcgtca 77972
>ref|NM_166951.1| Drosophila melanogaster cramped CG2714-RB, transcript variant B (crm), mRNA Length = 3845 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 199 gacgacggcggcggcggctgcgtca 175
>ref|NM_057757.3| Drosophila melanogaster cramped CG2714-RA, transcript variant A (crm), mRNA Length = 3784 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 138 gacgacggcggcggcggctgcgtca 114
>gb|AY051767.1| Drosophila melanogaster LD29481 full length cDNA Length = 3865 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 199 gacgacggcggcggcggctgcgtca 175
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 201 ggccgtcgacgacggcgccggcggc 225 |||||||||||||| |||||||||| Sbjct: 22372248 ggccgtcgacgacgacgccggcggc 22372272 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 ggtggcggtggtcggcggcggggtg 93 |||||||||| |||||||||||||| Sbjct: 6855830 ggtggcggtgctcggcggcggggtg 6855854 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 tgctcgccgccagcggcggaggcg 142 ||||||||||| |||||||||||| Sbjct: 25190383 tgctcgccgccggcggcggaggcg 25190360 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 202 gccgtcgacgacggcgccggcggctgcg 229 |||| ||||| ||||||||||||||||| Sbjct: 19246218 gccggcgacgccggcgccggcggctgcg 19246245
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gcggtggtcggcggcggggtg 93 ||||||||||||||||||||| Sbjct: 12376800 gcggtggtcggcggcggggtg 12376780
>dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0683C09 Length = 185139 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gtgggctggcggcggcgcacg 115 ||||||||||||||||||||| Sbjct: 22699 gtgggctggcggcggcgcacg 22679
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 197 cggtggccgtcgacgacggcgccggcggc 225 |||| ||||||||||||| |||||||||| Sbjct: 3499548 cggtcgccgtcgacgacgtcgccggcggc 3499576
>dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0011P19 Length = 150811 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gcggtggtcggcggcggggtg 93 ||||||||||||||||||||| Sbjct: 62445 gcggtggtcggcggcggggtg 62425
>dbj|AP003849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1753_E03 Length = 126734 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gtgggctggcggcggcgcacg 115 ||||||||||||||||||||| Sbjct: 100460 gtgggctggcggcggcgcacg 100440
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 gtggcggtggtcggcggcggg 90 ||||||||||||||||||||| Sbjct: 503128 gtggcggtggtcggcggcggg 503148
>gb|AE003425.3| Drosophila melanogaster chromosome X, section 9 of 74 of the complete sequence Length = 309053 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 104552 gacgacggcggcggcggctgcgtca 104576
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gtgggctggcggcggcgcacg 115 ||||||||||||||||||||| Sbjct: 3646162 gtgggctggcggcggcgcacg 3646142
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 agttgctcgccgccagcggcg 136 ||||||||||||||||||||| Sbjct: 4793530 agttgctcgccgccagcggcg 4793510
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 cgacgacggcgccggcggctg 227 ||||||||||||||||||||| Sbjct: 1312525 cgacgacggcgccggcggctg 1312545
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ggtggcggtggtcggcggcgg 89 ||||||||||||||||||||| Sbjct: 3295667 ggtggcggtggtcggcggcgg 3295687
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 201 ggccgtcgacgacggcgccggcggc 225 |||||||||||||| |||||||||| Sbjct: 22682159 ggccgtcgacgacgacgccggcggc 22682183 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 ggtggcggtggtcggcggcggggtg 93 |||||||||| |||||||||||||| Sbjct: 6922297 ggtggcggtgctcggcggcggggtg 6922321 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 tgctcgccgccagcggcggaggcg 142 ||||||||||| |||||||||||| Sbjct: 25509041 tgctcgccgccggcggcggaggcg 25509018 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 202 gccgtcgacgacggcgccggcggctgcg 229 |||| ||||| ||||||||||||||||| Sbjct: 19405767 gccggcgacgccggcgccggcggctgcg 19405794
>emb|Y13674.1|DMCRAMP Drosophila melanogaster mRNA for cramped protein (crm gene) Length = 3793 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 gacgacggcgccggcggctgcgtca 232 |||||||||| |||||||||||||| Sbjct: 138 gacgacggcggcggcggctgcgtca 114
>gb|AF336802.1| Yersinia pseudotuberculosis peripheral membrane protein BtuD gene, partial cds; alpha-helical peptide and polymyxin resistance operon, complete sequence; and putative lipoprotein NLPC-like precursor gene, partial cds Length = 8577 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tgagtgggctggcggcggcg 111 |||||||||||||||||||| Sbjct: 2375 tgagtgggctggcggcggcg 2394
>ref|XM_482570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcgacgacggcgccggcggc 225 |||||||||||||||||||| Sbjct: 845 tcgacgacggcgccggcggc 864
>ref|NM_195011.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0015J03.21), mRNA Length = 666 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgacgacggcgccggcggct 226 |||||||||||||||||||| Sbjct: 489 cgacgacggcgccggcggct 470
>ref|XM_464722.1| Oryza sativa (japonica cultivar-group), mRNA Length = 699 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cgtcgacgacggcgccggcg 223 |||||||||||||||||||| Sbjct: 562 cgtcgacgacggcgccggcg 543
>ref|XM_479559.1| Oryza sativa (japonica cultivar-group), mRNA Length = 942 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cgtcgacgacggcgccggcg 223 |||||||||||||||||||| Sbjct: 502 cgtcgacgacggcgccggcg 483
>gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700, complete sequence Length = 410554 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ggacggtggccgtcgacgac 213 |||||||||||||||||||| Sbjct: 85452 ggacggtggccgtcgacgac 85471
>gb|AE017135.1| Yersinia pestis biovar Medievalis str. 91001 section 9 of 16 of the complete genome Length = 291326 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tgagtgggctggcggcggcg 111 |||||||||||||||||||| Sbjct: 134824 tgagtgggctggcggcggcg 134805
>gb|AC151537.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0087D01, complete sequence Length = 83225 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cggtggccgtcgacgacggc 216 |||||||||||||||||||| Sbjct: 64526 cggtggccgtcgacgacggc 64507
>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 202 gccgtcgacgacggcgccggcggctgcg 229 |||| ||||| ||||||||||||||||| Sbjct: 115006 gccggcgacgccggcgccggcggctgcg 115033
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 105 ggcggcgcacgagttgctcgccgccagcggcg 136 ||||||||||||| | |||| ||||||||||| Sbjct: 3402558 ggcggcgcacgagatactcgtcgccagcggcg 3402527
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tgagtgggctggcggcggcg 111 |||||||||||||||||||| Sbjct: 2112194 tgagtgggctggcggcggcg 2112213
>gb|AC145775.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0313E01, complete sequence Length = 149215 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 tgctcgccgccagcggcggaggcg 142 ||||||||||| |||||||||||| Sbjct: 65653 tgctcgccgccggcggcggaggcg 65630
>gb|AC006372.2| Homo sapiens BAC clone RP11-331D5 from 7, complete sequence Length = 190846 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 316 gagagatcagacatgtctttctca 339 ||||||| |||||||||||||||| Sbjct: 83767 gagagattagacatgtctttctca 83790
>gb|AF143772.2| Mycobacterium avium strain 2151 glycopeptidolipid biosynthesis and daunorubicin resistance gene clusters and insertion sequences IS1601, IS1245 and IS1348, complete sequence Length = 71286 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gacgacggcgccggcggctg 227 |||||||||||||||||||| Sbjct: 56322 gacgacggcgccggcggctg 56341 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gacgacggcgccggcggctg 227 |||||||||||||||||||| Sbjct: 51808 gacgacggcgccggcggctg 51827
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gctcgccgccagcggcggag 139 |||||||||||||||||||| Sbjct: 3749944 gctcgccgccagcggcggag 3749963
>gb|BT009021.1| Triticum aestivum clone wdk3c.pk007.j3:fis, full insert mRNA sequence Length = 1349 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 gagggtggcggtggtcggcggcgg 89 |||||||| ||||||||||||||| Sbjct: 79 gagggtggtggtggtcggcggcgg 102
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tgagtgggctggcggcggcg 111 |||||||||||||||||||| Sbjct: 2752070 tgagtgggctggcggcggcg 2752051
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 ggatgagggtggcggtggtcggcg 85 ||||| |||||||||||||||||| Sbjct: 153161 ggatgcgggtggcggtggtcggcg 153138
>emb|AJ414152.1| Yersinia pestis strain CO92 complete genome; segment 12/20 Length = 313050 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tgagtgggctggcggcggcg 111 |||||||||||||||||||| Sbjct: 122064 tgagtgggctggcggcggcg 122045
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgacgacggcgccggcggct 226 |||||||||||||||||||| Sbjct: 132058 cgacgacggcgccggcggct 132077
>gb|AC159035.2| Pan troglodytes BAC clone CH251-297P8 from chromosome unknown, complete sequence Length = 207834 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 aggaggagagcctcggaggg 186 |||||||||||||||||||| Sbjct: 164981 aggaggagagcctcggaggg 165000
>gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequence Length = 41295 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 tggccgtcgacgacggcgcc 219 |||||||||||||||||||| Sbjct: 38145 tggccgtcgacgacggcgcc 38164
>gb|DQ397551.1| Cenarchaeum symbiosum clone C05D09, complete sequence Length = 43893 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 tggccgtcgacgacggcgcc 219 |||||||||||||||||||| Sbjct: 15939 tggccgtcgacgacggcgcc 15958
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gtggcggtggtcggcggcgg 89 |||||||||||||||||||| Sbjct: 1831594 gtggcggtggtcggcggcgg 1831575
>gb|AE005927.1| Caulobacter crescentus CB15 section 253 of 359 of the complete genome Length = 14874 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ggcggtggtcggcggcgggg 91 |||||||||||||||||||| Sbjct: 12435 ggcggtggtcggcggcgggg 12416
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tggcggtggtcggcggcggg 90 |||||||||||||||||||| Sbjct: 514735 tggcggtggtcggcggcggg 514716
>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0089D15, from Chromosome 10, complete sequence Length = 164679 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgacgacggcgccggcggct 226 |||||||||||||||||||| Sbjct: 157231 cgacgacggcgccggcggct 157212
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ggcggtggtcggcggcgggg 91 |||||||||||||||||||| Sbjct: 187136 ggcggtggtcggcggcgggg 187155
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 cgacggcgccggcggctgcg 229 |||||||||||||||||||| Sbjct: 837359 cgacggcgccggcggctgcg 837340
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgacgacggcgccggcggct 226 |||||||||||||||||||| Sbjct: 4160402 cgacgacggcgccggcggct 4160383
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 gccgtcgacgacggcgccggcggc 225 ||||||||||||| |||||||||| Sbjct: 16089351 gccgtcgacgacgtcgccggcggc 16089374 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgacggcgccggcggctgcg 229 |||||||||||||||||||| Sbjct: 11479719 cgacggcgccggcggctgcg 11479738
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcgacgacggcgccggcggc 225 |||||||||||||||||||| Sbjct: 21150269 tcgacgacggcgccggcggc 21150288
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcgacgacggcgccggcggc 225 |||||||||||||||||||| Sbjct: 5646189 tcgacgacggcgccggcggc 5646170
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cgtcgacgacggcgccggcg 223 |||||||||||||||||||| Sbjct: 6915123 cgtcgacgacggcgccggcg 6915104 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 gagggtggcggtggtcggcggcgg 89 |||||||| ||||||||||||||| Sbjct: 2776546 gagggtggtggtggtcggcggcgg 2776569
>dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0591A03 Length = 147043 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgacggcgccggcggctgcg 229 |||||||||||||||||||| Sbjct: 113407 cgacggcgccggcggctgcg 113426
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cgtcgacgacggcgccggcg 223 |||||||||||||||||||| Sbjct: 124442 cgtcgacgacggcgccggcg 124423
>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470A03 Length = 133167 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cgtcgacgacggcgccggcg 223 |||||||||||||||||||| Sbjct: 8745 cgtcgacgacggcgccggcg 8726
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 gagggtggcggtggtcggcggcgg 89 |||||||| ||||||||||||||| Sbjct: 44774 gagggtggtggtggtcggcggcgg 44797
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1328_D07 Length = 155007 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 gccgtcgacgacggcgccggcggc 225 ||||||||||||| |||||||||| Sbjct: 89564 gccgtcgacgacgtcgccggcggc 89587
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcgacgacggcgccggcggc 225 |||||||||||||||||||| Sbjct: 38336 tcgacgacggcgccggcggc 38317
>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0758B01 Length = 159206 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cgtcgacgacggcgccggcg 223 |||||||||||||||||||| Sbjct: 132849 cgtcgacgacggcgccggcg 132830
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcgacgacggcgccggcggc 225 |||||||||||||||||||| Sbjct: 121479 tcgacgacggcgccggcggc 121498
>dbj|AK120153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029P18, full insert sequence Length = 2277 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 gagggtggcggtggtcggcggcgg 89 |||||||| ||||||||||||||| Sbjct: 100 gagggtggtggtggtcggcggcgg 123
>dbj|AK111318.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-C11, full insert sequence Length = 799 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 cgtcgacgacggcgccggcg 223 |||||||||||||||||||| Sbjct: 401 cgtcgacgacggcgccggcg 420
>dbj|AK110453.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-E10, full insert sequence Length = 2368 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcgacgacggcgccggcggc 225 |||||||||||||||||||| Sbjct: 350 tcgacgacggcgccggcggc 369
>dbj|AK110569.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-D09, full insert sequence Length = 942 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cgtcgacgacggcgccggcg 223 |||||||||||||||||||| Sbjct: 502 cgtcgacgacggcgccggcg 483
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgacgacggcgccggcggct 226 |||||||||||||||||||| Sbjct: 4161223 cgacgacggcgccggcggct 4161204
>emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa0085B23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158019 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 cgacggcgccggcggctgcg 229 |||||||||||||||||||| Sbjct: 56799 cgacggcgccggcggctgcg 56780
>gb|CP000231.1| Rhodospirillum rubrum ATCC 11170 plasmid, complete sequence Length = 53732 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccgtcgacgacggcgccggc 222 |||||||||||||||||||| Sbjct: 40857 ccgtcgacgacggcgccggc 40876 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,799,859 Number of Sequences: 3902068 Number of extensions: 2799859 Number of successful extensions: 68065 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64496 Number of HSP's gapped (non-prelim): 3569 length of query: 416 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 394 effective length of database: 17,147,199,772 effective search space: 6755996710168 effective search space used: 6755996710168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
