Clone Name | bastl22g06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | EDA_HUMAN (Q92838) Ectodysplasin-A (Ectodermal dysplasia protein... | 28 | 5.6 | 2 | AGRN_CHICK (P31696) Agrin (Fragment) | 28 | 7.3 |
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>EDA_HUMAN (Q92838) Ectodysplasin-A (Ectodermal dysplasia protein) (EDA| protein) [Contains: Ectodysplasin-A, membrane form; Ectodysplasin-A, secreted form] Length = 391 Score = 28.5 bits (62), Expect = 5.6 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%) Frame = -1 Query: 88 PTKAPRQLDRQGIG--GAPGRKSRGNPSIFF 2 P APR+ QG G GAP R GN + F Sbjct: 13 PAAAPRERGSQGCGCGGAPARAGEGNSCLLF 43
>AGRN_CHICK (P31696) Agrin (Fragment)| Length = 1955 Score = 28.1 bits (61), Expect = 7.3 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +3 Query: 21 PRDFLPGAPPIPCRSSCRGALVGFG 95 P + PP P R +CRG L GFG Sbjct: 41 PNSYFTQTPPTP-RDACRGMLCGFG 64 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.126 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,902,821 Number of Sequences: 219361 Number of extensions: 164280 Number of successful extensions: 579 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 557 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 579 length of database: 80,573,946 effective HSP length: 7 effective length of database: 79,038,419 effective search space used: 1896922056 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)