>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H|
            antigen)
          Length = 2115

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +2

Query: 245  GALLPHVAAAGISARLATRRFPRASRIPASATTVGWISATPR 370
            GA    ++ A  + R  TRR PR +   ASA T   I ATPR
Sbjct: 2067 GASKKALSKASPNTRSGTRRSPRIATTTASAATAAAIGATPR 2108

>LATS2_HUMAN (Q9NRM7) Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 2) (Serine/threonine-protein
           kinase kpm) (Kinase phosphorylated during mitosis
           protein) (Warts-like kinase)
          Length = 1088

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 5/86 (5%)
 Frame = +3

Query: 9   PSVHVQICPRFLVGSLPPRFPRRGAMSRPPAAAQP-----NSTVAAQFNQXXXXXXXXXX 173
           P  HV   P   V S    F        PP  A+P     N+  A               
Sbjct: 390 PRAHVAFRPDCPVPSRTNSFNSHQPRPGPPGKAEPSLPAPNTVTAVTAAHILHPVKSVRV 449

Query: 174 XXXXXXXVAGPFQPLGVPRPAPFPAP 251
                    GP  P  VP PAP PAP
Sbjct: 450 LRPEPQTAVGPSHPAWVPAPAPAPAP 475

>PACS1_RAT (O88588) Phosphofurin acidic cluster sorting protein 1 (PACS-1)|
          Length = 961

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
 Frame = +3

Query: 57  PPRFPRRGAMSRPPAAAQPNSTVAAQFNQXXXXXXXXXXXXXXXXXVAGPFQPLGVPRPA 236
           PP+ P +     PP  AQ  S+ ++  +                  VA    P G P P 
Sbjct: 33  PPQQPSQPQQPTPPKLAQATSS-SSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPG 91

Query: 237 PFPAP----FYHTW 266
             PAP     Y TW
Sbjct: 92  RTPAPVQMNLYATW 105

>VEGA_MYXXA (P07935) Vegetative protein|
          Length = 178

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -2

Query: 282 EIPAAATCGRRAPGTAPAA 226
           +IPAAA  GRR PG  PAA
Sbjct: 60  QIPAAAKAGRRGPGRPPAA 78

>SYFB_PSESM (Q883H7) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 792

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +1

Query: 280 FRPSCHPALSAGLAYTSLRHHRRVDFGHTQAPPLTRSVGL 399
           F P  HPAL  G     LR  R V F     P L++++GL
Sbjct: 633 FTPGQHPALHPGQTARILRDGREVGFLGAIHPELSKNLGL 672

>FUMC_PSEPK (Q88M20) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)|
          Length = 464

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
 Frame = +1

Query: 304 LSAGLAYTSLRHHRRVDFGHT---QAPPLT 384
           LS+GLA  S+RHH+ V  G T    A P+T
Sbjct: 165 LSSGLAELSMRHHKLVKTGRTHMMDATPIT 194


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,900,495
Number of Sequences: 219361
Number of extensions: 797707
Number of successful extensions: 4179
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4145
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)