Clone Name | bastl22g03 |
---|---|
Clone Library Name | barley_pub |
>gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 genomic sequence, complete sequence Length = 137366 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 gcccaacccaactccaccgtc 125 ||||||||||||||||||||| Sbjct: 123321 gcccaacccaactccaccgtc 123301
>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete sequence Length = 135789 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 gcccaacccaactccaccgtc 125 ||||||||||||||||||||| Sbjct: 111398 gcccaacccaactccaccgtc 111418
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 gcccaacccaactccaccgtc 125 ||||||||||||||||||||| Sbjct: 19654207 gcccaacccaactccaccgtc 19654227
>gb|AY109219.1| Zea mays PCO071871 mRNA sequence Length = 610 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 taccagcctccgccaccaccg 344 ||||||||||||||||||||| Sbjct: 276 taccagcctccgccaccaccg 256
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 gcccaacccaactccaccgtc 125 ||||||||||||||||||||| Sbjct: 19665467 gcccaacccaactccaccgtc 19665487
>gb|M23528.1|AVINIFHDGK A.vinelandii nitrogenase 3 (anf) subunits H,D,G,K genes, complete cds, and ORFs Length = 6108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 cggcgttccgcggccggcgcc 238 ||||||||||||||||||||| Sbjct: 5067 cggcgttccgcggccggcgcc 5087
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cggcgccgttcccggcgccc 251 |||||||||||||||||||| Sbjct: 2680252 cggcgccgttcccggcgccc 2680271
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 cgcggccggcgccgttcccggcgc 249 ||||||||||||||| |||||||| Sbjct: 189356 cgcggccggcgccgtccccggcgc 189379
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 cgcggccggcgccgttcccggcgc 249 ||||||||||||||| |||||||| Sbjct: 101440 cgcggccggcgccgtccccggcgc 101463
>emb|AJ576039.1|GWE576039 Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome Length = 101016 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 ccgccaccaccgtcgggtgg 352 |||||||||||||||||||| Sbjct: 90848 ccgccaccaccgtcgggtgg 90829
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ccgccgccgcccaacccaac 116 |||||||||||||||||||| Sbjct: 2416134 ccgccgccgcccaacccaac 2416115 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,796,352 Number of Sequences: 3902068 Number of extensions: 2796352 Number of successful extensions: 54125 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53830 Number of HSP's gapped (non-prelim): 295 length of query: 442 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 420 effective length of database: 17,147,199,772 effective search space: 7201823904240 effective search space used: 7201823904240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)