ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl22f10 |
|---|---|
| Clone Library Name | barley_pub |
>JIP1_HUMAN (Q9UQF2) C-jun-amino-terminal kinase-interacting protein 1| (JNK-interacting protein 1) (JIP-1) (JNK MAP kinase scaffold protein 1) (Islet-brain 1) (IB-1) (Mitogen-activated protein kinase 8-interacting protein 1) Length = 711 Score = 32.0 bits (71), Expect = 0.36 Identities = 12/15 (80%), Positives = 12/15 (80%) Frame = -3 Query: 82 PERVPPPGGGWGGSL 38 PER PPGGGW GSL Sbjct: 342 PERAEPPGGGWRGSL 356
>JIP1_MOUSE (Q9WVI9) C-jun-amino-terminal kinase-interacting protein 1| (JNK-interacting protein 1) (JIP-1) (JNK MAP kinase scaffold protein 1) (Islet-brain-1) (IB-1) (Mitogen-activated protein kinase 8-interacting protein 1) Length = 707 Score = 32.0 bits (71), Expect = 0.36 Identities = 12/15 (80%), Positives = 12/15 (80%) Frame = -3 Query: 82 PERVPPPGGGWGGSL 38 PER PPGGGW GSL Sbjct: 338 PERAEPPGGGWRGSL 352
>SGG_DROME (P18431) Protein kinase shaggy (EC 2.7.11.1) (Protein zeste-white 3)| Length = 1067 Score = 31.2 bits (69), Expect = 0.62 Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 8/94 (8%) Frame = -3 Query: 346 SPEARRSATAADQEAGREGSTARRNSARTEGVEVW--------MAVPCRLRVLEAGAAVQ 191 S + + TAA +G G+TA A G P + A AAV Sbjct: 973 SAQPQSQGTAAAAGSGSGGATAGTGGASAGGPGSGNNSSSGGASGAPSAVAAGGANAAVA 1032 Query: 190 GDAARGSTGGCTLAAAIA*MPVVATTRPGAEVYD 89 G A G G AAA A + AT GA V D Sbjct: 1033 GGAGGGGGAGAATAAATATGAIGATNAGGANVTD 1066
>ODP2_AZOVI (P10802) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) Length = 637 Score = 30.8 bits (68), Expect = 0.80 Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Frame = -3 Query: 208 AGAAVQGDAARGSTGGCTLA--AAIA*MPVVATTRPGAEVY 92 AGAA G ARGS G A AA A PV A +R GA+V+ Sbjct: 297 AGAAPSGPRARGSPGQAAAAPGAAPAPAPVGAPSRNGAKVH 337
>JIP1_RAT (Q9R237) C-jun-amino-terminal kinase-interacting protein 1| (JNK-interacting protein 1) (JIP-1) (JNK MAP kinase scaffold protein 1) (Islet-brain-1) (IB-1) (Mitogen-activated protein kinase 8-interacting protein 1) (JIP-1-related protein) (JRP) Length = 708 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = -3 Query: 82 PERVPPPGGGWGGSL 38 PE+ PPGGGW GSL Sbjct: 339 PEQAEPPGGGWRGSL 353
>BCCP_ARATH (Q42533) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,| chloroplast precursor (BCCP) Length = 280 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Frame = +3 Query: 147 AARVQPPVDPRAASPCTAAPASNTRSLQGTAIHTSTPSVRA----LFLRAVDPSRP 302 A ++ PP P AA+P + PAS T +S P+V++ F R+ P P Sbjct: 168 AQQMAPPAAPAAAAPAPSTPASLPPPSPPTPAKSSLPTVKSPMAGTFYRSPAPGEP 223
>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific| SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase complex subunit SET1) (SET-domain-containing protein 1A) Length = 1707 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/56 (30%), Positives = 21/56 (37%) Frame = +1 Query: 70 EPSQESGHKXXXXXXXXXXXXSKQWRQQECSLRSTHERRRLARQPPLPTPEAYRAR 237 E +E G + + + SLRS RRR PP P P AY R Sbjct: 1363 EEGEEEGEEEEEESSDSSSSSDGEGALRRRSLRSHARRRRPPPPPPPPPPRAYEPR 1418
>WIBG_DROME (P82804) Protein within the bgcn gene intron| Length = 207 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +1 Query: 133 SKQWRQQECSLRSTHERRRLARQPPLPTPEAYRARPSTLPP 255 SK+ R+++ R+ + + RQP P P PST PP Sbjct: 69 SKKEREKQERTRAKKQEKESGRQPKAPAPGVLVMPPSTCPP 109
>CCG8_RAT (Q8VHW5) Voltage-dependent calcium channel gamma-8 subunit| (Neuronal voltage-gated calcium channel gamma-8 subunit) Length = 421 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/52 (36%), Positives = 23/52 (44%) Frame = +3 Query: 99 SAPGRVVATTGI*AMAAARVQPPVDPRAASPCTAAPASNTRSLQGTAIHTST 254 +A G V TG PP P A P AAPA T S + A +T+T Sbjct: 372 AASGVTVTVTG----------PPAAPAPAPPAPAAPAPGTLSKEAAASNTNT 413
>CAN2_CHICK (Q92178) Calpain-2 catalytic subunit precursor (EC 3.4.22.53)| (Calpain-2 large subunit) (Calcium-activated neutral proteinase 2) (CANP 2) (Calpain M-type) (M-calpain) (Millimolar-calpain) Length = 699 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = -3 Query: 274 NSARTEGVEVWMAVP--CRLRVLEAGAAVQGDAARGSTGGCTLAAAIA 137 NS +T+GV VW C AG A + D +G+ G C L AAIA Sbjct: 65 NSYKTKGV-VWCRPTELCSCPRFIAGGATRTDICQGALGDCWLLAAIA 111
>SUZ2_DROME (P25172) Protein suppressor 2 of zeste (Protein posterior sex| combs) Length = 1368 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Frame = +1 Query: 49 PTPPPA--AEPSQESGHKXXXXX-XXXXXXXSKQWRQQECSLRSTHERRRLARQPPLPTP 219 PTPPP AEP Q+ + +Q +QQ+ + + L PPLP P Sbjct: 591 PTPPPTPTAEPEQQQQQQQQQQQPQQQQQQQQQQQQQQQFVVLPKIKDLTLPTSPPLP-P 649 Query: 220 EAYRA-RPSTLPPLP 261 ++A PST P P Sbjct: 650 SLFKAYTPSTTPTAP 664
>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) Length = 650 Score = 29.3 bits (64), Expect = 2.3 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +3 Query: 159 QPPVDPRAAS-PCTAAPASNTRSLQGTAIHTSTPSVRALFLRAVDPSRPASWSAAVADLL 335 QPP P AAS P A PAS+ G + P+VR +R DP + + L Sbjct: 44 QPPPGPAAASGPGAAGPASSPPP-AGPGPGPALPAVRLSLVRLGDPDGAGEPPSTPSGLG 102 Query: 336 ASGD 347 A GD Sbjct: 103 AGGD 106
>MRCKG_HUMAN (Q6DT37) Serine/threonine-protein kinase MRCK gamma (EC 2.7.11.1)| (CDC42-binding protein kinase gamma) (Myotonic dystrophy kinase-related CDC42-binding kinase gamma) (Myotonic dystrophy protein kinase-like alpha) (MRCK gamma) (DMPK-like gamma Length = 1551 Score = 29.3 bits (64), Expect = 2.3 Identities = 21/63 (33%), Positives = 27/63 (42%) Frame = -3 Query: 226 RLRVLEAGAAVQGDAARGSTGGCTLAAAIA*MPVVATTRPGAEVYDRFPERVPPPGGGWG 47 R+R L+A A VQ G A A P++ P A PE +PP GG G Sbjct: 1218 RIRELQAPATVQSLGLLGDRLCVGAAGGFALYPLLNEAAPLALGAGLVPEELPPSRGGLG 1277 Query: 46 GSL 38 +L Sbjct: 1278 EAL 1280
>NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)| Length = 1176 Score = 29.3 bits (64), Expect = 2.3 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = +3 Query: 162 PPVDPRAASPCTAAPASNTRSLQGTAIHTSTPSVRALFLRAVDPSRPAS 308 P PR++SP T+ P S T S +TP+ A +PS PAS Sbjct: 1013 PSTPPRSSSPVTSPPQSPTSS--------ATPATTASSSCTTNPSGPAS 1053
>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)| Length = 926 Score = 29.3 bits (64), Expect = 2.3 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = +3 Query: 117 VATTGI*AMAAARVQPPVDPRAASPCTAAPASNTRSLQG-TAIHTSTPSVRALFLRAVDP 293 VA + A AAA P AA AAPA++ + +A ++ +P+ V P Sbjct: 701 VAVAAVAAPAAAAATPSPANAAALAAAAAPATSVSAATSVSAANSISPAAPVAPAAVVPP 760 Query: 294 SRPASWSAAV 323 + P S +AAV Sbjct: 761 AAPVSPAAAV 770
>Y007_MYCTU (P71575) Hypothetical protein Rv0007/MT0007| Length = 304 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 232 PCRLRVLEAGAAVQGDAARGSTGGCTLAA 146 P R E GA +GD+A GS+GG ++ A Sbjct: 141 PAPARPAEGGAGSRGDSAAGSSGGRSITA 169
>IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)| Length = 512 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +3 Query: 141 MAAARVQPPVDPRAASPCTAAPASNT 218 M A PP DPRA +P APA++T Sbjct: 219 MTLAIAPPPADPRAPAPERKAPAADT 244
>IE63_HHV1E (P36295) Transcriptional regulator IE63 (VMW63) (ICP27)| Length = 511 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +3 Query: 141 MAAARVQPPVDPRAASPCTAAPASNT 218 M A PP DPRA +P APA++T Sbjct: 218 MTLAIAPPPADPRAPAPERKAPAADT 243
>EXPA_DROME (Q07436) Protein expanded| Length = 1427 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/79 (24%), Positives = 31/79 (39%) Frame = +1 Query: 28 AMTSNFHPTPPPAAEPSQESGHKXXXXXXXXXXXXSKQWRQQECSLRSTHERRRLARQPP 207 ++ S++ P PPP P+ + ++ R + L S + R PP Sbjct: 1142 SLCSSYEPPPPPPLHPAALAAAAAAGAGSSSSSMFARS-RSDDNILNSLDLLPKGKRLPP 1200 Query: 208 LPTPEAYRARPSTLPPLPS 264 P P Y R PP+P+ Sbjct: 1201 -PPPPPYVNRRLKKPPMPA 1218
>CHLD_SYNP7 (O07345) Magnesium-chelatase subunit chlD (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) Length = 677 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 1/77 (1%) Frame = +3 Query: 120 ATTGI*AMAAARVQPPVDPRAASPCTAAPASNTRSLQGTAIHTSTPSVRALFLR-AVDPS 296 A G + A + VDP A +S+ A+H P + L DP+ Sbjct: 15 AVVGQGPIKLALILAAVDPGLGGVAIAGRRGTAKSVMARALHALLPPIEILENSFNADPN 74 Query: 297 RPASWSAAVADLLASGD 347 R W A A+G+ Sbjct: 75 RAGDWDALTQQRQANGE 91
>CHLD_SYNY3 (P72772) Magnesium-chelatase subunit chlD (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) Length = 676 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 2/68 (2%) Frame = +3 Query: 114 VVATTGI*AMAAARVQPPVDPRAASPCTAAPASNTRSLQGTAIHTSTPSVRAL--FLRAV 287 + A G A+ A + +DP A +S+ AIHT P + + Sbjct: 14 ITAIVGQEAIKLALLLGAIDPGLGGIVIAGRRGTAKSVMARAIHTLLPPIEIIKGNRYQC 73 Query: 288 DPSRPASW 311 DP P SW Sbjct: 74 DPKNPGSW 81
>Y1709_RALSO (Q8XYP9) UPF0209 protein RSc1709| Length = 657 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/79 (27%), Positives = 34/79 (43%) Frame = +3 Query: 105 PGRVVATTGI*AMAAARVQPPVDPRAASPCTAAPASNTRSLQGTAIHTSTPSVRALFLRA 284 P R++ G+ ++A R+ P + A AP R H + P V L+ Sbjct: 551 PARLLGYVGVRCVSANRL-PLIGAVADEAAIMAPGFRLRGP-----HAALPRVPGLYAAL 604 Query: 285 VDPSRPASWSAAVADLLAS 341 SR +WS A+LLA+ Sbjct: 605 AYGSRGLTWSVLGAELLAA 623
>IKBL_PIG (Q9TSV7) NF-kappa-B inhibitor-like protein 1 (Inhibitor of kappa| B-like) (I-kappa-B-like) (IkappaBL) (Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1) Length = 380 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +1 Query: 133 SKQWRQQECSLRSTHERRRLARQPPLPTPEAYRARPSTLPPLP 261 S WRQQE R ER R A++ L +A RA+ + P+P Sbjct: 232 SHSWRQQEEEQRLFRERAR-AKEEELRESQARRAQEAPRDPVP 273
>EGLN1_HUMAN (Q9GZT9) Egl nine homolog 1 (EC 1.14.11.-) (Hypoxia-inducible| factor prolyl hydroxylase 2) (HIF-prolyl hydroxylase 2) (HIF-PH2) (HPH-2) (Prolyl hydroxylase domain-containing protein 2) (PHD2) (SM-20) Length = 426 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +3 Query: 78 SGKRS*TSAPGRVVATTGI*AMAAARVQPPVDP-RAASPCTAAPASNTRSLQGTAI 242 +G R A R +G A + +PP DP AASPC AA QG+A+ Sbjct: 88 AGAREPRKAAARRDNASGDAAKGKVKAKPPADPAAAASPCRAAAGG-----QGSAV 138
>DOC2A_RAT (P70611) Double C2-like domain-containing protein alpha| (Doc2-alpha) Length = 403 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -3 Query: 112 RPGAEVYDRFPERVPPPGGGWGG 44 RP ++ D FP R P P GG GG Sbjct: 27 RPIRQISDYFPRRGPGPEGGGGG 49
>BCSB_SALTY (Q93IN1) Cyclic di-GMP-binding protein precursor (Cellulose| synthase regulatory subunit) Length = 766 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -3 Query: 130 PVVATTRPGAEVYDRFPERVPPPG 59 PVVA T P EV F + PPPG Sbjct: 49 PVVAQTAPSREVKLTFAQIAPPPG 72
>BCSB_SALTI (Q8Z290) Cyclic di-GMP-binding protein precursor (Cellulose| synthase regulatory subunit) Length = 766 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -3 Query: 130 PVVATTRPGAEVYDRFPERVPPPG 59 PVVA T P EV F + PPPG Sbjct: 49 PVVAQTAPSREVKLTFAQIAPPPG 72
>DOC2A_MOUSE (Q7TNF0) Double C2-like domain-containing protein alpha| (Doc2-alpha) Length = 405 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -3 Query: 112 RPGAEVYDRFPERVPPPGGGWGG 44 RP ++ D FP R P P GG GG Sbjct: 27 RPIRQISDYFPRRGPGPEGGGGG 49
>TRPI_PSEAE (P11720) HTH-type transcriptional regulator trpI (TrpBA operon| transcriptional activator) Length = 295 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/62 (32%), Positives = 25/62 (40%) Frame = +3 Query: 141 MAAARVQPPVDPRAASPCTAAPASNTRSLQGTAIHTSTPSVRALFLRAVDPSRPASWSAA 320 +A R+ P V PR A A A R LQ +HT+ SRP +W A Sbjct: 161 LAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTA--------------SRPQAWPAW 206 Query: 321 VA 326 A Sbjct: 207 AA 208
>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1003 Score = 28.1 bits (61), Expect = 5.2 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Frame = +3 Query: 105 PGRVVATTGI*AMAAARVQPPVDPRAASPCTAAPASNTRS--LQGTAIHTSTPSVRALFL 278 P +AT+G+ A++ QPP P + SP + S ++ L ++ ++ S R L Sbjct: 177 PKPALATSGLSLALASQEQPPQSPSSPSPVPSPVLSPSQEGHLAAASVTSTPASERQLPA 236 Query: 279 RAVDPSRP 302 R D + P Sbjct: 237 RQKDTAVP 244
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 171 DPRAASPCTAAPASNTRSLQGTAIHTSTPSV 263 DP AA+P T A A SL G+AI P++ Sbjct: 1334 DPAAAAPQTIAEAMEAFSLGGSAIPEEAPTI 1364
>SUHB_MYCLE (P46813) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase)| (Inositol-1-phosphatase) (I-1-Pase) Length = 291 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = -3 Query: 253 VEVWMAVPCRLRVLEAGAAVQGDAARGSTGGCTLAAAIA 137 V+VW L EAGA VQ G GG L A A Sbjct: 231 VQVWDCAAGALIAAEAGACVQLPKRNGPVGGAGLVVAAA 269
>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) (Proline-rich inositol polyphosphate 5-phosphatase) Length = 1001 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = +3 Query: 105 PGRVVATTGI*AMAAARVQPPVDPRAASPCTAAPAS-NTRSLQGTAIHTSTPS 260 P +AT+G+ A++ QPP P + SP + S + S A TSTP+ Sbjct: 177 PKPALATSGLSLALASQEQPPQSPSSPSPVPSPVLSPSQESHLAPATVTSTPA 229
>LRTM3_MOUSE (Q8BZ81) Leucine-rich repeat transmembrane neuronal protein 3| precursor Length = 582 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = +1 Query: 157 CSLRSTHERRRLARQPPLPT--PEAYRARPSTLPPLP 261 C +T ER LAR P PT P+ R + + PPLP Sbjct: 361 CGKSTTTERFDLARALPKPTFKPKLPRPKHESKPPLP 397
>TETM_STRLI (Q02652) Tetracycline resistance protein tetM| Length = 639 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -3 Query: 262 TEGVEVWMAVPCRLRVLEAGAAVQGDAARGSTG 164 T G VW + PC R L+AG + G G +G Sbjct: 606 THGEAVWSSRPCEDRPLKAGNSGPGTGVGGHSG 638
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +3 Query: 138 AMAAARVQPPVDPRAASPCTAAPASNTRSLQGTA 239 A+AAA P P +SP A+PAS++ G++ Sbjct: 153 ALAAAEAGAPGGPGRSSPSAASPASSSSGSSGSS 186
>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22| Length = 907 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/81 (24%), Positives = 33/81 (40%) Frame = +1 Query: 13 QTKKYAMTSNFHPTPPPAAEPSQESGHKXXXXXXXXXXXXSKQWRQQECSLRSTHERRRL 192 +++ Y+ + + PTPP P+Q+ G + S + R + S + R Sbjct: 735 RSRSYSRSVSRSPTPPRRQAPAQQRGRQ-------RSYTPSDRSRSRSYSRSRSPRGRSY 787 Query: 193 ARQPPLPTPEAYRARPSTLPP 255 R P P+A A S PP Sbjct: 788 TRSPDRAGPQASTAPRSGGPP 808
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 8/69 (11%) Frame = +1 Query: 37 SNFHPTPPPAAE--------PSQESGHKXXXXXXXXXXXXSKQWRQQECSLRSTHERRRL 192 S+ PTPPP+ + PS+E G R E +LR T E + L Sbjct: 4349 SSLPPTPPPSVQQKMVNGVTPSEELGEHPKDAASA---------RDSERALRDTSEVKSL 4399 Query: 193 ARQPPLPTP 219 LPTP Sbjct: 4400 DLLAALPTP 4408
>RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis protein 1| (Rab3-interacting molecule 1) (RIM 1) Length = 1615 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +3 Query: 120 ATTGI*AMAAARVQPPVDPRAASPCTAAPASN 215 AT G A A ARV PP PRA + P + Sbjct: 430 ATAGKRAPATARVSPPESPRARAAAAQPPTEH 461
>LACTB_MOUSE (Q9EP89) Serine beta-lactamase-like protein LACTB| Length = 551 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = +3 Query: 147 AARVQPPVDPRAASPCTAAPASNTRSLQGTAIHTSTPSVRALFLRAVDPSR 299 A +Q P DP A+ S+ ++L + HT P F RA++ SR Sbjct: 63 AVPIQSPADPEASG---TTELSHEQALSPGSPHTPAPPAARGFSRAIESSR 110
>RIR1_HHV23 (P09853) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) (136 kDa subunit) Length = 1144 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 137 SNGGSKSAASGRPTSGVALHGSPRFQHPK 223 ++G S + + G TSG LHG+PR P+ Sbjct: 117 TSGPSATTSVGTQTSGEFLHGNPRTPEPQ 145
>PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor| Length = 1955 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +1 Query: 145 RQQECSLRSTHERRRLARQPPLPTPEAYRARPSTLPPLPSA 267 RQ EC+ + + A +P +P P A P PP P A Sbjct: 1405 RQAECTKTARIQAALPAAKPAVPAPAPVAAPPPPPPPPPGA 1445
>CT151_HUMAN (Q8NC74) Protein C20orf151| Length = 664 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Frame = +3 Query: 144 AAARVQPPVDPRAASPCTAAPASNTRSLQGTAI----HTSTPSVRALFLRAVDPSRP 302 AAA P P + P T +P + + +GT + STP +DPSRP Sbjct: 468 AAAHTASPEPPTQSGPLTRSPQALSNGTKGTRVPEQEEASTP---------MDPSRP 515
>SELPL_HUMAN (Q14242) P-selectin glycoprotein ligand 1 precursor (PSGL-1)| (Selectin P ligand) (CD162 antigen) Length = 412 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/61 (27%), Positives = 28/61 (45%) Frame = +3 Query: 78 SGKRS*TSAPGRVVATTGI*AMAAARVQPPVDPRAASPCTAAPASNTRSLQGTAIHTSTP 257 +G + T+AP + A T A A+ PP A + T A + T + + T T+ P Sbjct: 187 TGLEAQTTAPAAMEAQTTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQP 246 Query: 258 S 260 + Sbjct: 247 T 247
>MTG8R_XENLA (Q9IAB2) Protein CBFA2T2 (MTG8-like protein) (MTG8-related protein| 1) Length = 586 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +1 Query: 34 TSNFHPTPPPAAEPSQE 84 TS+FHPTPPP S E Sbjct: 267 TSHFHPTPPPLQHYSLE 283
>NR1H3_RAT (Q62685) Oxysterols receptor LXR-alpha (Liver X receptor alpha)| (Nuclear orphan receptor LXR-alpha) (RLD-1) Length = 445 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 148 QQECSLRSTHERRRLARQPPLPTPEAYRAR 237 QQ+C+ RS +R R+ P P P++ AR Sbjct: 219 QQQCNRRSFSDRLRVTPWPIAPDPQSREAR 248
>NR1H3_MOUSE (Q9Z0Y9) Oxysterols receptor LXR-alpha (Liver X receptor alpha)| (Nuclear orphan receptor LXR-alpha) Length = 445 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 148 QQECSLRSTHERRRLARQPPLPTPEAYRAR 237 QQ+C+ RS +R R+ P P P++ AR Sbjct: 219 QQQCNRRSFSDRLRVTPWPIAPDPQSREAR 248
>IF2_XANOR (Q5GXU9) Translation initiation factor IF-2| Length = 906 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = +3 Query: 138 AMAAARVQPPVDPRAA-SPCTAAPASNTRSLQGTAIHTSTPSVRALFLRAVDPSRP 302 A AAA P AA +P AAPA+ S +A S P + R P+RP Sbjct: 179 AAAAASAPAPAPVAAAPTPSAAAPAARAPSSPSSAPRPSRPGGASPASRPSTPARP 234
>PRMA_SYMTH (Q67S51) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 304 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = +3 Query: 162 PPVDPRAASPCTAAPASNTRSLQGTAIHTSTPSVRALFLRAVDPSR 299 PP DP + P + Q + T +R+L L AVDP+R Sbjct: 51 PPGDPEWVTVSGWLPEAGDVEQQRLRLETGLDEIRSLGLGAVDPAR 96
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 27.3 bits (59), Expect = 8.9 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Frame = +3 Query: 138 AMAAARVQPPVDPRA--ASPCTAAPASNTRSLQGTAIHTSTPSVRALFLRAVDPSRPASW 311 A AA + P P A A P AAP++ + + G A P V+A A P PA Sbjct: 77 ASAAPKPGAPAKPAAPAAKPAPAAPSAASAAKPGAA---PKPGVQAKPAAAAKPGAPAKP 133 Query: 312 SAAVA 326 +A A Sbjct: 134 AAPAA 138
>ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor endothelial| marker 8) Length = 562 Score = 27.3 bits (59), Expect = 8.9 Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 3/88 (3%) Frame = +1 Query: 13 QTKKYAMTSNFHPTPPPAAE---PSQESGHKXXXXXXXXXXXXSKQWRQQECSLRSTHER 183 Q KY + + +HP+ PP A P + H C + Sbjct: 489 QPAKYPLNNTYHPSSPPPAPIYTPPPPAPH---------------------CPPPAPS-- 525 Query: 184 RRLARQPPLPTPEAYRARPSTLPPLPSA 267 A PP+P+P PSTLPP P A Sbjct: 526 ---APTPPIPSP------PSTLPPPPQA 544
>XERD_XYLFT (Q87DN0) Tyrosine recombinase xerD| Length = 324 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 Query: 160 SLRSTHERRRLARQPPLPTPE 222 +LR+T++RR+LARQ P PE Sbjct: 2 TLRTTNQRRQLARQQPPLLPE 22
>RANB9_MOUSE (P69566) Ran-binding protein 9 (RanBP9) (Ran-binding protein M)| (RanBPM) (B cell antigen receptor Ig beta-associated protein 1) (IBAP-1) Length = 653 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +1 Query: 196 RQPPLPTPEAYRARPSTLPP 255 +QPP P P A A P+T PP Sbjct: 12 QQPPPPPPPASAAAPATAPP 31
>MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (Lol p Va) (Lol p| Ib) Length = 308 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%) Frame = +1 Query: 181 RRRLARQ---PPLPTPEAYRARPSTLPPLPS 264 R+RLA + PPLPTP + S+ PP PS Sbjct: 63 RQRLASRQPWPPLPTPLRRTSSRSSRPPSPS 93
>LRTM3_MACFA (Q9BGP6) Leucine-rich repeat transmembrane neuronal protein 3| precursor Length = 581 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +1 Query: 166 RSTHERRRLARQPPLPT--PEAYRARPSTLPPLP 261 +ST ER LAR P PT P+ R + + PPLP Sbjct: 363 KSTTERFDLARALPKPTFKPKLPRPKHESKPPLP 396
>LRTM3_HUMAN (Q86VH5) Leucine-rich repeat transmembrane neuronal protein 3| precursor Length = 581 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +1 Query: 166 RSTHERRRLARQPPLPT--PEAYRARPSTLPPLP 261 +ST ER LAR P PT P+ R + + PPLP Sbjct: 363 KSTTERFDLARALPKPTFKPKLPRPKHESKPPLP 396
>ATG26_LEPMC (Q8NJS1) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)| (Autophagy-related protein 26) (UDP-glycosyltransferase 51) Length = 1456 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +1 Query: 202 PPLPTPEAYRARPSTLPPLPSAR 270 PP P+PE P++ PP P+A+ Sbjct: 174 PPRPSPEGSMPAPASSPPPPAAK 196
>K1C23_HUMAN (Q9C075) Keratin, type I cytoskeletal 23 (Cytokeratin-23) (CK-23)| (Keratin-23) (K23) Length = 422 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%) Frame = -3 Query: 175 GSTGGCTLAAAIA*MPVVATTRPGAEVYDRFPER-VPPPGGGWGGSLMS 32 G+ GG + P V GA + F R PPPGG WG S Sbjct: 17 GAGGGWGRPRSFPRAPTVHGGAGGARISLSFTTRSCPPPGGSWGSGRSS 65
>IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 357 Score = 27.3 bits (59), Expect = 8.9 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Frame = +3 Query: 99 SAPGRVVATTGI*AMAAARVQPPV---DPRAASPCTAAPASNTRSLQGTAIHTSTPSV 263 +AP V A T A A P DP AA+ TAAP S Q A T P++ Sbjct: 21 AAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQTPASAQAPA-QTPAPAL 77 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.125 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,116,921 Number of Sequences: 219361 Number of extensions: 807775 Number of successful extensions: 3814 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 3376 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3795 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
