ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl22f10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_477609.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2022 Score = 127 bits (64), Expect = 3e-26 Identities = 124/144 (86%) Strand = Plus / Plus Query: 262 tccgcgcgctgttcctccgcgccgtcgacccctcccgtcccgcctcctggtccgccgccg 321 |||||||||| |||||||||||||||||||| || || ||||| ||||||||||| |||| Sbjct: 134 tccgcgcgctcttcctccgcgccgtcgacccgtcgcgccccgcgtcctggtccgcggccg 193 Query: 322 tcgccgacctccttgcttccggagacgccgtcgccgctctggccacctttgccgccgctc 381 |||| |||||||| | ||||| ||||| |||||||| || ||||| || |||||||| Sbjct: 194 tcgcagacctcctctcctccggcgacgcggtcgccgccctcgccacgttcgccgccgccg 253 Query: 382 tccgcgctaacccggccgcgctcc 405 ||||||| ||||| |||||||||| Sbjct: 254 tccgcgccaaccccgccgcgctcc 277
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 127 bits (64), Expect = 3e-26 Identities = 124/144 (86%) Strand = Plus / Minus Query: 262 tccgcgcgctgttcctccgcgccgtcgacccctcccgtcccgcctcctggtccgccgccg 321 |||||||||| |||||||||||||||||||| || || ||||| ||||||||||| |||| Sbjct: 11823528 tccgcgcgctcttcctccgcgccgtcgacccgtcgcgccccgcgtcctggtccgcggccg 11823469 Query: 322 tcgccgacctccttgcttccggagacgccgtcgccgctctggccacctttgccgccgctc 381 |||| |||||||| | ||||| ||||| |||||||| || ||||| || |||||||| Sbjct: 11823468 tcgcagacctcctctcctccggcgacgcggtcgccgccctcgccacgttcgccgccgccg 11823409 Query: 382 tccgcgctaacccggccgcgctcc 405 ||||||| ||||| |||||||||| Sbjct: 11823408 tccgcgccaaccccgccgcgctcc 11823385
>dbj|AP006343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1032F05 Length = 151412 Score = 127 bits (64), Expect = 3e-26 Identities = 124/144 (86%) Strand = Plus / Minus Query: 262 tccgcgcgctgttcctccgcgccgtcgacccctcccgtcccgcctcctggtccgccgccg 321 |||||||||| |||||||||||||||||||| || || ||||| ||||||||||| |||| Sbjct: 55828 tccgcgcgctcttcctccgcgccgtcgacccgtcgcgccccgcgtcctggtccgcggccg 55769 Query: 322 tcgccgacctccttgcttccggagacgccgtcgccgctctggccacctttgccgccgctc 381 |||| |||||||| | ||||| ||||| |||||||| || ||||| || |||||||| Sbjct: 55768 tcgcagacctcctctcctccggcgacgcggtcgccgccctcgccacgttcgccgccgccg 55709 Query: 382 tccgcgctaacccggccgcgctcc 405 ||||||| ||||| |||||||||| Sbjct: 55708 tccgcgccaaccccgccgcgctcc 55685
>ref|XM_480900.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1044 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 300 cccgcctcctggtccgccgccgtcgccga 328 |||||||||| |||||||||||||||||| Sbjct: 49 cccgcctcctcgtccgccgccgtcgccga 77
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 300 cccgcctcctggtccgccgccgtcgccga 328 |||||||||| |||||||||||||||||| Sbjct: 8493683 cccgcctcctcgtccgccgccgtcgccga 8493655
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 300 cccgcctcctggtccgccgccgtcgccga 328 |||||||||| |||||||||||||||||| Sbjct: 5594 cccgcctcctcgtccgccgccgtcgccga 5566
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 300 cccgcctcctggtccgccgccgtcgccga 328 |||||||||| |||||||||||||||||| Sbjct: 23226 cccgcctcctcgtccgccgccgtcgccga 23198
>gb|AC103352.8| Mus musculus chromosome 8, clone RP23-418G1, complete sequence Length = 207330 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatgcca 31 ||||||||||||||||||||||| Sbjct: 72748 caaacaaacaaaaaagtatgcca 72726
>gb|BT009433.1| Triticum aestivum clone wlmk4.pk0002.h5:fis, full insert mRNA sequence Length = 415 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 313 ccgccgccgtcgccgacctcct 334 |||||||||||||||||||||| Sbjct: 378 ccgccgccgtcgccgacctcct 399
>gb|AC142405.4| Mus musculus BAC clone RP24-559P3 from chromosome 5, complete sequence Length = 144109 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaagt 25 ||||||||||||||||||||| Sbjct: 80084 caatcaaacaaacaaaaaagt 80064
>ref|XM_756908.1| Ustilago maydis 521 hypothetical protein (UM05854.1) partial mRNA Length = 4965 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 ccgcctcctggtccgccgccg 321 ||||||||||||||||||||| Sbjct: 3184 ccgcctcctggtccgccgccg 3204
>ref|XM_755372.1| Ustilago maydis 521 hypothetical protein (UM04318.1) partial mRNA Length = 1899 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 ttccggagacgccgtcgccgc 358 ||||||||||||||||||||| Sbjct: 1382 ttccggagacgccgtcgccgc 1402
>gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosome 17, complete sequence Length = 192971 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatgc 29 ||||||||||||||||||||| Sbjct: 101024 caaacaaacaaaaaagtatgc 101004
>gb|AC095532.8| Rattus norvegicus 18 BAC CH230-8E4 (Children's Hospital Oakland Research Institute) complete sequence Length = 227576 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 gcaatcaaacaaacaaaaaag 24 ||||||||||||||||||||| Sbjct: 34482 gcaatcaaacaaacaaaaaag 34502
>emb|CR932800.1| Mus musculus chromosome 2, clone ResGen-169L23 strain 129/Sv, complete sequence Length = 124093 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaagtatgc 29 |||||||||||||||||| |||||| Sbjct: 85917 caatcaaacaaacaaaaatgtatgc 85893
>emb|BX897725.7| Zebrafish DNA sequence from clone CH211-244P18 in linkage group 20 Contains the gene for a novel protein similar to vertebrate delta-like 4 (Drosophila) (DLL4), the vps18 gene for vacuolar protein sorting protein 18, the gene for a novel protein containing an SNF2 family N-terminal domain and a Helicase conserved C-terminal domain, the gene for a novel protein similar to vertebrate ras homolog gene family, member V (RHOV), the gene for a novel protein containing a ChaC-like protein domain and three CpG islands, complete sequence Length = 170125 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 caatcaaacaaacaaaaaagt 25 ||||||||||||||||||||| Sbjct: 86854 caatcaaacaaacaaaaaagt 86874
>emb|CR759734.3| Zebrafish DNA sequence from clone CH211-140L7 in linkage group 20, complete sequence Length = 185855 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaagt 25 ||||||||||||||||||||| Sbjct: 54521 caatcaaacaaacaaaaaagt 54501
>gb|AC106763.2| Homo sapiens chromosome 5 clone RP11-21C10, complete sequence Length = 165902 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatgc 29 ||||||||||||||||||||| Sbjct: 80340 caaacaaacaaaaaagtatgc 80320
>gb|AC012468.10| Homo sapiens chromosome 10 clone RP11-179H18, complete sequence Length = 146578 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatgc 29 ||||||||||||||||||||| Sbjct: 109886 caaacaaacaaaaaagtatgc 109866
>gb|AC011433.5| Homo sapiens chromosome 5 clone P1_988H11, complete sequence Length = 75454 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatgc 29 ||||||||||||||||||||| Sbjct: 67507 caaacaaacaaaaaagtatgc 67527
>gb|AC005874.3|AC005874 citb_175_g_20, complete sequence Length = 177750 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatgc 29 ||||||||||||||||||||| Sbjct: 36307 caaacaaacaaaaaagtatgc 36287
>emb|AL929049.4| Zebrafish DNA sequence from clone DKEY-14A13 in linkage group 20, complete sequence Length = 223182 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 caatcaaacaaacaaaaaagt 25 ||||||||||||||||||||| Sbjct: 94077 caatcaaacaaacaaaaaagt 94097
>gb|AF134471.2| Homo sapiens chromosome 10 clone citb_175_g_20_Contig902E_1999.01.14, complete sequence Length = 177747 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatgc 29 ||||||||||||||||||||| Sbjct: 36304 caaacaaacaaaaaagtatgc 36284
>emb|AL928877.6| Mouse DNA sequence from clone RP23-52D18 on chromosome 2, complete sequence Length = 201120 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaagtatgc 29 |||||||||||||||||| |||||| Sbjct: 172522 caatcaaacaaacaaaaatgtatgc 172498
>emb|AL772207.4| Mouse DNA sequence from clone RP23-91G17 on chromosome 4, complete sequence Length = 148320 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 caatcaaacaaacaaaaaagt 25 ||||||||||||||||||||| Sbjct: 26597 caatcaaacaaacaaaaaagt 26617
>gb|AC168116.3| Mus musculus BAC clone RP24-108N24 from chromosome 1, complete sequence Length = 158847 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 147681 caatcaaacaaacaaaaaag 147700
>gb|AC102291.7| Mus musculus chromosome 15, clone RP24-366F6, complete sequence Length = 143783 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 53529 caaacaaacaaaaaagtatg 53548
>gb|AC111100.13| Mus musculus chromosome 3, clone RP23-179J8, complete sequence Length = 216852 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 188271 caaacaaacaaaaaagtatg 188290
>gb|AC166800.5| Mus musculus chromosome 1, clone RP24-260I21, complete sequence Length = 162752 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 7077 caaacaaacaaaaaagtatg 7058
>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aatcaaacaaacaaaaaagt 25 |||||||||||||||||||| Sbjct: 36760 aatcaaacaaacaaaaaagt 36779
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 347 cgccgtcgccgctctggccacctttgccgccg 378 |||||||||||| ||||| |||||||||||| Sbjct: 3921377 cgccgtcgccgccttggccgcctttgccgccg 3921346
>ref|XM_602429.2| PREDICTED: Bos taurus similar to Protocadherin 19 precursor (LOC524109), mRNA Length = 3552 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 agtgcagcctccggtcgacccacg 178 ||||||||||||||||| |||||| Sbjct: 3322 agtgcagcctccggtcgccccacg 3299
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 cgccgccgtcgccgacctcc 333 |||||||||||||||||||| Sbjct: 2070757 cgccgccgtcgccgacctcc 2070738
>gb|AE009095.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 121 of 256 of the complete sequence Length = 10601 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cgaagcctacagggcacggc 238 |||||||||||||||||||| Sbjct: 253 cgaagcctacagggcacggc 272
>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence Length = 225376 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcaatcaaacaaacaaaaaa 23 |||||||||||||||||||| Sbjct: 177760 gcaatcaaacaaacaaaaaa 177741
>gb|AC161180.3| Mus musculus chromosome 1, clone RP23-149C6, complete sequence Length = 215599 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aatcaaacaaacaaaaaagt 25 |||||||||||||||||||| Sbjct: 209883 aatcaaacaaacaaaaaagt 209864
>gb|AY569015.1| Homo sapiens angiopoietin-like 3 (ANGPTL3) gene, complete cds Length = 11294 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aatcaaacaaacaaaaaagt 25 |||||||||||||||||||| Sbjct: 6655 aatcaaacaaacaaaaaagt 6674
>gb|AC100539.12| Mus musculus chromosome 1, clone RP23-152E3, complete sequence Length = 225993 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 184035 caaacaaacaaaaaagtatg 184016
>gb|AC140428.3| Mus musculus BAC clone RP23-100P8 from chromosome 7, complete sequence Length = 218370 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 138570 caatcaaacaaacaaaaaag 138551
>emb|CR974589.6| Mouse DNA sequence from clone RP23-77B14 on chromosome 12, complete sequence Length = 198849 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 47076 caatcaaacaaacaaaaaag 47057
>ref|XM_805671.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510391.10) partial mRNA Length = 10446 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cgccgtcgacccctcccgtcccgc 304 |||||||||| ||||||||||||| Sbjct: 4749 cgccgtcgacgcctcccgtcccgc 4726
>gb|AC125146.3| Mus musculus BAC clone RP24-348B1 from chromosome 2, complete sequence Length = 212563 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 23220 caatcaaacaaacaaaaaag 23239
>gb|AC128673.4| Homo sapiens BAC clone RP11-1195P3 from UL, complete sequence Length = 209514 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 12818 caaacaaacaaaaaagtatg 12837
>ref|XM_800387.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053508395.9) partial mRNA Length = 5871 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cgccgtcgacccctcccgtcccgc 304 |||||||||| ||||||||||||| Sbjct: 4746 cgccgtcgacgcctcccgtcccgc 4723
>ref|XM_814564.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510463.39) partial mRNA Length = 10005 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cgccgtcgacccctcccgtcccgc 304 |||||||||| ||||||||||||| Sbjct: 4749 cgccgtcgacgcctcccgtcccgc 4726
>gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, complete sequence Length = 195651 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcaatcaaacaaacaaaaaa 23 |||||||||||||||||||| Sbjct: 11482 gcaatcaaacaaacaaaaaa 11463
>gb|AC108773.9| Mus musculus chromosome 5, clone RP23-118L1, complete sequence Length = 222706 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 51082 caaacaaacaaaaaagtatg 51101
>gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, complete sequence Length = 210347 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatgccat 32 |||||||||||||||||| ||||| Sbjct: 85104 caaacaaacaaaaaagtaggccat 85081
>emb|CR708095.2|CNS0G9BF Tetraodon nigroviridis full-length cDNA Length = 1282 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cggagacgccgtcgccgctc 360 |||||||||||||||||||| Sbjct: 931 cggagacgccgtcgccgctc 950
>gb|AF317339.1| Gaetice depressus cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 577 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 agcaatggcggcagcaagag 156 |||||||||||||||||||| Sbjct: 329 agcaatggcggcagcaagag 310
>emb|AL592295.25| Human DNA sequence from clone RP11-122G18 on chromosome 1 Contains the 3' end of a novel gene, the MPZ gene for myelin protein zero (Charcot-Marie-Tooth neuropathy 1B), the SDHC gene for succinate dehydrogenase complex subunit C integral membrane protein 15kDa, the gene for a novel protein, a novel gene, a pseudogene similar to part of ribonucleotide reductase M2 polypeptide (RRM2), a ribosomal protein S2 (RPS2) pseudogene and two CpG islands, complete sequence Length = 162189 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 77582 caaacaaacaaaaaagtatg 77563
>emb|AL591368.6| Human DNA sequence from clone RP11-154D17 on chromosome 9 Contains the 3' end of a novel gene, complete sequence Length = 64425 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 40502 caaacaaacaaaaaagtatg 40521
>emb|AL513007.5| Human DNA sequence from clone CTD-2530H13 on chromosome X Contains the RNF12 gene for ring finger protein 12, a cytoplasmic poly(A) binding protein (PABPC) pseudogene and a CpG island, complete sequence Length = 90105 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcaatcaaacaaacaaaaaa 23 |||||||||||||||||||| Sbjct: 44456 gcaatcaaacaaacaaaaaa 44437
>gb|AF333159.1| Dermatocarpon miniatum var. miniatum isolate SH10 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; 28S ribosomal RNA gene, partial sequence Length = 556 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggtccgccgccgtcgccgac 329 |||||||||||||||||||| Sbjct: 396 ggtccgccgccgtcgccgac 377
>gb|AF333158.1| Dermatocarpon linkolae isolate SH17 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; 28S ribosomal RNA gene, partial sequence Length = 553 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggtccgccgccgtcgccgac 329 |||||||||||||||||||| Sbjct: 394 ggtccgccgccgtcgccgac 375
>gb|AF333156.1| Dermatocarpon leptophyllum isolate SH20 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; 28S ribosomal RNA gene, partial sequence Length = 553 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggtccgccgccgtcgccgac 329 |||||||||||||||||||| Sbjct: 391 ggtccgccgccgtcgccgac 372
>gb|AF333153.1| Dermatocarpon miniatum var. miniatum isolate SH27 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; 28S ribosomal RNA gene, partial sequence Length = 559 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggtccgccgccgtcgccgac 329 |||||||||||||||||||| Sbjct: 397 ggtccgccgccgtcgccgac 378
>gb|AF333152.1| Dermatocarpon miniatum var. complicatum isolate SH15 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; 28S ribosomal RNA gene, partial sequence Length = 559 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggtccgccgccgtcgccgac 329 |||||||||||||||||||| Sbjct: 397 ggtccgccgccgtcgccgac 378
>gb|AF333151.1| Dermatocarpon miniatum var. complicatum isolate SH4 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; 28S ribosomal RNA gene, partial sequence Length = 559 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggtccgccgccgtcgccgac 329 |||||||||||||||||||| Sbjct: 397 ggtccgccgccgtcgccgac 378
>gb|AF333133.1| Dermatocarpon luridum isolate SH6 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; 28S ribosomal RNA gene, partial sequence Length = 556 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggtccgccgccgtcgccgac 329 |||||||||||||||||||| Sbjct: 394 ggtccgccgccgtcgccgac 375
>gb|AF333132.1| Dermatocarpon luridum isolate SH55 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; 28S ribosomal RNA gene, partial sequence Length = 555 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggtccgccgccgtcgccgac 329 |||||||||||||||||||| Sbjct: 393 ggtccgccgccgtcgccgac 374
>emb|AL356098.10| Human DNA sequence from clone RP11-457L23 on chromosome 13 Contains an Alport syndrome mental retardation midface hypoplasia and elliptocytosis chromosomal region gene 1 (AMMECR1) pseudogene, complete sequence Length = 186305 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 94153 caatcaaacaaacaaaaaag 94134
>gb|AF516703.1| Gaetice depressus cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 558 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 agcaatggcggcagcaagag 156 |||||||||||||||||||| Sbjct: 306 agcaatggcggcagcaagag 287
>emb|AL138847.14| Human DNA sequence from clone RP5-849H19 on chromosome 1p32.1-33 Contains part of the DOCK7 gene for dedicator of cytokinesis 7, a ribosomal protein L13a (RPL13A) and the ANGPTL3 gene for angiopoietin-like 3, complete sequence Length = 66673 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aatcaaacaaacaaaaaagt 25 |||||||||||||||||||| Sbjct: 22591 aatcaaacaaacaaaaaagt 22610
>emb|AL157826.8| Human DNA sequence from clone RP11-176P17 on chromosome 9p22.3-24.1 Contains part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 149087 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 147178 caaacaaacaaaaaagtatg 147197
>emb|AL034373.13|HS424L16 Human DNA sequence from clone RP3-424L16 on chromosome 6q12-13 Contains part of the RAB3IP2 gene for RAB3 interacting protein 2, complete sequence Length = 107484 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 45997 caatcaaacaaacaaaaaag 45978
>gb|AE008834.1| Salmonella typhimurium LT2, section 138 of 220 of the complete genome Length = 20029 Score = 40.1 bits (20), Expect = 5.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 247 cttccaccccttccgtccgcgcgctgtt 274 ||||||||||||||| |||||||||||| Sbjct: 15642 cttccaccccttccg-ccgcgcgctgtt 15668
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 347 cgccgtcgccgctctggccacctttgccgccg 378 |||||||||||| ||||| |||||||||||| Sbjct: 110368 cgccgtcgccgccttggccgcctttgccgccg 110337
>gb|AC164291.2| Mus musculus BAC clone RP24-85F23 from chromosome 16, complete sequence Length = 237479 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 gcaatcaaacaaacaaaaaagtat 27 |||| ||||||||||||||||||| Sbjct: 55714 gcaaacaaacaaacaaaaaagtat 55691
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 347 cgccgtcgccgctctggccacctttgccgccg 378 |||||||||||| ||||| |||||||||||| Sbjct: 122167 cgccgtcgccgccttggccgcctttgccgccg 122136
>emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on chromosome 13 Contains the 3' end of the Csh1 gene for chorionic somatomammotropin hormone 1, two genes for novel proteins similar to chorionic somatomammotropin hormone 1 (Csh1), the Prlpi gene for prolactin-like protein I (Prlpj, decidualin), the Csh2 gene for chorionic somatomammotropin hormone 2, the gene for protein 1600016E11RIK similar to prolactin and a novel gene (4930511O05Rik), complete sequence Length = 207737 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 128920 caatcaaacaaacaaaaaag 128939
>emb|CR381585.11| Zebrafish DNA sequence from clone DKEY-27P7 in linkage group 20 Contains the gene for a novel protein similar to mouse and human integrin beta 1 binding protein 1 (ITGB1BP1), the gene for a novel protein similar to vertebrate development and differentiation enhancing factor 2 (DDEF2) and three CpG islands, complete sequence Length = 209698 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 167993 caaacaaacaaaaaagtatg 167974
>ref|NM_001012562.1| Gallus gallus ankylosis, progressive homolog (mouse) (ANKH), mRNA Length = 1612 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 1569 caaacaaacaaaaaagtatg 1550
>gb|AC090480.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-248L18, Complete Sequence, complete sequence Length = 231039 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 47254 caatcaaacaaacaaaaaag 47273
>gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127439 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 126199 caaacaaacaaaaaagtatg 126218
>gb|AC022145.8| Homo sapiens chromosome 19 clone CTD-2579N5, complete sequence Length = 174994 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 168705 caaacaaacaaaaaagtatg 168724
>gb|AC093318.52| Mus musculus strain C57BL/6J clone rp23-252h7 map 1, complete sequence Length = 198381 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 111322 caatcaaacaaacaaaaaag 111341
>gb|AC099060.2| Homo sapiens chromosome 1 clone RP11-415A20, complete sequence Length = 152692 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aatcaaacaaacaaaaaagt 25 |||||||||||||||||||| Sbjct: 129105 aatcaaacaaacaaaaaagt 129086
>gb|AF457206.1| Drosophila melanogaster pygopus mRNA, complete cds Length = 2448 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 ccgcctcctggtccgccgcc 320 |||||||||||||||||||| Sbjct: 386 ccgcctcctggtccgccgcc 367
>dbj|AK138537.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330053C18 product:unclassifiable, full insert sequence Length = 3383 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gcaatcaaacaaacaaaaaa 23 |||||||||||||||||||| Sbjct: 3046 gcaatcaaacaaacaaaaaa 3065
>gb|AC084200.22| Homo sapiens 12q BAC RP11-654D12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191886 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 758 caaacaaacaaaaaagtatg 777
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cgaagcctacagggcacggc 238 |||||||||||||||||||| Sbjct: 1322149 cgaagcctacagggcacggc 1322168
>gb|AC022325.5| Homo sapiens BAC clone RP11-391J13 from 4, complete sequence Length = 193057 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 28144 caaacaaacaaaaaagtatg 28163
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 ccgccgccgtcgccgacctccttg 336 ||||||||||||| |||||||||| Sbjct: 87532 ccgccgccgtcgcagacctccttg 87509
>gb|AC026469.8| Homo sapiens chromosome 16 clone RP11-442O1, complete sequence Length = 199669 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gcaatcaaacaaacaaaaaa 23 |||||||||||||||||||| Sbjct: 103012 gcaatcaaacaaacaaaaaa 103031
>emb|BX323987.12| Zebrafish DNA sequence from clone DKEY-125E8, complete sequence Length = 164299 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 109135 caatcaaacaaacaaaaaag 109154
>emb|CR406743.1| Gallus gallus finished cDNA, clone ChEST988o4 Length = 998 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 gcaatcaaacaaacaaaaaagtat 27 |||| ||||||||||||||||||| Sbjct: 556 gcaaacaaacaaacaaaaaagtat 579
>gb|AC134432.4| Mus musculus BAC clone RP24-389K11 from chromosome 8, complete sequence Length = 150334 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 37470 caatcaaacaaacaaaaaag 37451
>gb|AC179924.2| Mus musculus BAC clone RP23-270O20 from chromosome 12, complete sequence Length = 217229 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcaatcaaacaaacaaaaaa 23 |||||||||||||||||||| Sbjct: 173737 gcaatcaaacaaacaaaaaa 173718
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 tccgccgccgtcgccgacct 331 |||||||||||||||||||| Sbjct: 28263390 tccgccgccgtcgccgacct 28263409
>gb|AC107210.5| Homo sapiens BAC clone RP11-70M19 from 4, complete sequence Length = 112895 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aatcaaacaaacaaaaaagt 25 |||||||||||||||||||| Sbjct: 102288 aatcaaacaaacaaaaaagt 102307
>gb|AC104084.5| Homo sapiens BAC clone RP11-601I8 from 2, complete sequence Length = 109138 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 58068 caaacaaacaaaaaagtatg 58049
>gb|AC011502.7| Homo sapiens chromosome 19 clone CTB-87J17, complete sequence Length = 38882 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 8347 caaacaaacaaaaaagtatg 8366
>gb|AC092601.3| Homo sapiens BAC clone RP11-125M15 from 2, complete sequence Length = 198364 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 23698 caatcaaacaaacaaaaaag 23679
>gb|AC005000.2|AC005000 Homo sapiens clone RP1-241P17, complete sequence Length = 107314 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 88834 caaacaaacaaaaaagtatg 88815
>gb|AC090430.7| Mus Musculus Strain C57BL6/J chromosome 10 BAC, RP23-131G5, complete sequence Length = 185453 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcaatcaaacaaacaaaaaa 23 |||||||||||||||||||| Sbjct: 144724 gcaatcaaacaaacaaaaaa 144705
>emb|AL844604.4| Mouse DNA sequence from clone RP24-318C20 on chromosome 4, complete sequence Length = 173133 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 99332 caatcaaacaaacaaaaaag 99313
>emb|AL773520.3| Mouse DNA sequence from clone RP23-350F23 on chromosome 4, complete sequence Length = 214496 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 77424 caatcaaacaaacaaaaaag 77405
>gb|AC102224.21| Mus musculus chromosome 3, clone RP24-372D1, complete sequence Length = 196936 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 47057 caaacaaacaaaaaagtatg 47076
>emb|AL590328.2|CNS07EG5 Human chromosome 14 DNA sequence BAC R-818K5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 175210 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 85118 caaacaaacaaaaaagtatg 85137
>gb|AC007057.3|AC007057 Homo sapiens chromosome 14 clone containing genes for UP50 and Trip230, complete sequence Length = 171901 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 21185 caaacaaacaaaaaagtatg 21166
>emb|AL136332.5|CNS01DW4 Human chromosome 14 DNA sequence BAC R-807G16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 209157 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gcaatcaaacaaacaaaaaa 23 |||||||||||||||||||| Sbjct: 208028 gcaatcaaacaaacaaaaaa 208047
>emb|AL135998.6|CNS01DVO Human chromosome 14 DNA sequence BAC R-137H15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 165871 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 37395 caatcaaacaaacaaaaaag 37376
>emb|AL159141.5|CNS01RGQ Human chromosome 14 DNA sequence BAC R-828K24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174318 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcaatcaaacaaacaaaaaa 23 |||||||||||||||||||| Sbjct: 68890 gcaatcaaacaaacaaaaaa 68871
>gb|AY900659.1| Gallus gallus progressive ankylosis protein (ANK) mRNA, complete cds Length = 1612 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 1569 caaacaaacaaaaaagtatg 1550
>gb|AC161367.4| Mus musculus BAC clone RP23-450F3 from chromosome 1, complete sequence Length = 188588 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 126681 caatcaaacaaacaaaaaag 126662
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 aacacccgaagcctacaggg 232 |||||||||||||||||||| Sbjct: 971839 aacacccgaagcctacaggg 971820
>emb|BX537531.1|HSM806059 Homo sapiens mRNA; cDNA DKFZp686G091 (from clone DKFZp686G091) Length = 6675 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 1235 caaacaaacaaaaaagtatg 1254
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gccgccgtcgccgacctcct 334 |||||||||||||||||||| Sbjct: 2903124 gccgccgtcgccgacctcct 2903105
>emb|AL831741.16| Mouse DNA sequence from clone RP23-337N2 on chromosome 4, complete sequence Length = 213347 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 209077 caatcaaacaaacaaaaaag 209058
>gb|AC115832.14| Mus musculus chromosome 3, clone RP24-137P14, complete sequence Length = 139149 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 127014 caaacaaacaaaaaagtatg 126995
>emb|AL831708.9| Mouse DNA sequence from clone RP23-23B17 on chromosome X, complete sequence Length = 113082 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 75861 caatcaaacaaacaaaaaag 75880
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 tccgccgccgtcgccgacct 331 |||||||||||||||||||| Sbjct: 55698 tccgccgccgtcgccgacct 55717
>emb|AL133246.3|CNS01DUJ BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 852C13 of library RPCI-11 from chromosome 2 of Homo sapiens (Human) Length = 222730 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cctctcaggaaagcggtcat 93 |||||||||||||||||||| Sbjct: 47553 cctctcaggaaagcggtcat 47534
>gb|AC160645.2| Gallus gallus BAC clone CH261-21L11 from chromosome unknown, complete sequence Length = 223748 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 147253 caatcaaacaaacaaaaaag 147234
>gb|AC142104.4| Mus musculus BAC clone RP24-313C11 from 8, complete sequence Length = 157626 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 27540 caatcaaacaaacaaaaaag 27559
>gb|AC151573.2| Mus musculus BAC clone RP23-410B24 from 8, complete sequence Length = 202731 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 64802 caatcaaacaaacaaaaaag 64783
>emb|AL953900.7| Mouse DNA sequence from clone RP24-166A20 on chromosome 2, complete sequence Length = 131582 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caatcaaacaaacaaaaaag 24 |||||||||||||||||||| Sbjct: 102666 caatcaaacaaacaaaaaag 102647
>gb|AC158523.2| Mus musculus BAC clone RP23-371I11 from chromosome 12, complete sequence Length = 176139 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcaatcaaacaaacaaaaaa 23 |||||||||||||||||||| Sbjct: 11963 gcaatcaaacaaacaaaaaa 11944
>emb|AL590994.13| Mouse DNA sequence from clone RP23-382C19 on chromosome 11, complete sequence Length = 207814 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 caaacaaacaaaaaagtatg 28 |||||||||||||||||||| Sbjct: 75829 caaacaaacaaaaaagtatg 75810
>gb|M23007.1|STYCYSJIHA S.typhimurium NADPH-sulfite reductase flavoprotein component (cysJ), NADPH-sulfite reductase hemoprotein component (cysI), and 3' phosphoadenosine 5'-phosphosulfate sulfotransferase (cysH) genes, complete cds Length = 6050 Score = 40.1 bits (20), Expect = 5.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 247 cttccaccccttccgtccgcgcgctgtt 274 ||||||||||||||| |||||||||||| Sbjct: 1830 cttccaccccttccg-ccgcgcgctgtt 1804 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,222,452 Number of Sequences: 3902068 Number of extensions: 4222452 Number of successful extensions: 316567 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 315346 Number of HSP's gapped (non-prelim): 1223 length of query: 405 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 383 effective length of database: 17,147,199,772 effective search space: 6567377512676 effective search space used: 6567377512676 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
