>TBC2_CHLRE (Q8VXP3) Tbc2 translation factor, chloroplast precursor|
          Length = 1115

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
 Frame = +1

Query: 124  AATAGLDRISAAGDPRFPIALLAVAAGDG----------DQGTRIAAAA 240
            AA AG    +AAGD    ++ +  AAGDG          D GT   AAA
Sbjct: 933  AAPAGASSAAAAGDSPAALSAVPAAAGDGALVPSFMSIDDDGTAAVAAA 981

>MMPL3_MYCTU (O53657) Putative membrane protein mmpL3|
          Length = 944

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
 Frame = +1

Query: 154  AAGDPRFPIALLAVAAGDGDQGTRI-----AAAAYLKIFARRNMEGGLSSSDL 297
            AAGDP  P A L +   DGD          A     K   RR   G LS+ DL
Sbjct: 885  AAGDPAEPTAALPIIRSDGDDSEAATEQLNARGTSDKTRQRRRGGGALSAQDL 937

>MTNA_LEPIN (Q8F2A8) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 364

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 17/76 (22%)
 Frame = +1

Query: 118 VDAATAGLDRISAAGDP-----RFPIALLA--------VAAGDGDQGTRIAAAAYLKIFA 258
           +DA   G DRI++ GD       +P+A++A        VAA       RI   +Y+ I  
Sbjct: 234 IDAVIVGADRIASNGDTANKIGTYPLAIVAKHHGVPFYVAATAKSMDFRIPNGSYIPIEM 293

Query: 259 RRNME----GGLSSSD 294
           R+  E    G L  SD
Sbjct: 294 RKEEEITSFGFLKDSD 309

>MTNA_LEPIC (Q72T46) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 364

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 17/76 (22%)
 Frame = +1

Query: 118 VDAATAGLDRISAAGDP-----RFPIALLA--------VAAGDGDQGTRIAAAAYLKIFA 258
           +DA   G DRI++ GD       +P+A++A        VAA       RI   +Y+ I  
Sbjct: 234 IDAVIVGADRIASNGDTANKIGTYPLAIVAKHHGVPFYVAATAKSMDFRIPNGSYIPIEM 293

Query: 259 RRNME----GGLSSSD 294
           R+  E    G L  SD
Sbjct: 294 RKEEEITSFGFLKDSD 309


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,108,367
Number of Sequences: 219361
Number of extensions: 267732
Number of successful extensions: 812
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)