Clone Name | bastl22e09 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_466437.1| Oryza sativa (japonica cultivar-group), mRNA Length = 696 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 98 tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 140 ||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 132 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 174
>ref|XM_466438.1| Oryza sativa (japonica cultivar-group), mRNA Length = 655 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 98 tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 140 ||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 133 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 175
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 98 tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 140 ||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 22641908 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 22641950 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 ggcgtggcggcggccgcggcggagg 233 |||||||||||||| |||||||||| Sbjct: 5317811 ggcgtggcggcggcggcggcggagg 5317835 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cgccgtcctcctcgccaccg 139 |||||||||||||||||||| Sbjct: 32619262 cgccgtcctcctcgccaccg 32619281 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 1154983 ggcggcggccgcggcggagg 1154964
>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056I22 Length = 147728 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 98 tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 140 ||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 89719 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 89761
>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046O12 Length = 128223 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 98 tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 140 ||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 704 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 746
>dbj|AK105378.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-F02, full insert sequence Length = 655 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 98 tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 140 ||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 133 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 175
>dbj|AK063583.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-H12, full insert sequence Length = 696 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 98 tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 140 ||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 132 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 174
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 105 cgtcctcctcgcgtccgccgtcctcctcgccac 137 |||||||||||| ||||||||||||||||||| Sbjct: 273616 cgtcctcctcgccgccgccgtcctcctcgccac 273648 Score = 46.1 bits (23), Expect = 0.10 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 102 cgccgtcctcctcgc-gtccgccgtcctcctcgcc 135 ||||||||||||||| ||||| ||||||||||||| Sbjct: 424901 cgccgtcctcctcgccgtccgacgtcctcctcgcc 424935 Score = 40.1 bits (20), Expect = 6.2 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 103 gccgtcctcctcg-cgtccgccgtcctcctcgccaccgcg 141 ||||||||||||| |||| |||||| |||||||| ||||| Sbjct: 424863 gccgtcctcctcgccgtcggccgtcgtcctcgccgccgcg 424902 Score = 40.1 bits (20), Expect = 6.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 97 ctgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 140 |||| ||||||||||||||| ||||||||| |||||| |||| Sbjct: 188588 ctgcccgccgtcctcctcgccgtcgccgtcctgctcgccgccgc 188545
>ref|XM_504412.1| Yarrowia lipolytica CLIB122, YALI0E26125g predicted mRNA Length = 699 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 121 gccgtcctcctcgccaccgcggcctcc 147 |||||||||||||||||||| |||||| Sbjct: 13 gccgtcctcctcgccaccgccgcctcc 39
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 121 gccgtcctcctcgccaccgcggcctcc 147 |||||||||||||||||||| |||||| Sbjct: 3103995 gccgtcctcctcgccaccgccgcctcc 3104021
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 cccgggccgcgggggcggcggc 258 |||||||||||||||||||||| Sbjct: 3964355 cccgggccgcgggggcggcggc 3964334 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gtggcggcggccgcggcgga 231 |||||||||||||||||||| Sbjct: 3734972 gtggcggcggccgcggcgga 3734953
>ref|XM_587451.2| PREDICTED: Bos taurus similar to U4/U6 small nuclear ribonucleoprotein Prp3 (Pre-mRNA splicing factor 3) (U4/U6 snRNP 90 kDa protein) (hPrp3) (LOC510322), mRNA Length = 2995 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 209 ggcgtggcggcggccgcggcgg 230 |||||||||||||||||||||| Sbjct: 82 ggcgtggcggcggccgcggcgg 103
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cctgctcgccgtcctcctcgcg 117 |||||||||||||||||||||| Sbjct: 2226701 cctgctcgccgtcctcctcgcg 2226680
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 cccgggccgcgggggcggcggc 258 |||||||||||||||||||||| Sbjct: 155036 cccgggccgcgggggcggcggc 155015
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 cccgggccgcgggggcggcggc 258 |||||||||||||||||||||| Sbjct: 164427 cccgggccgcgggggcggcggc 164406
>dbj|AB075560.1| Nocardia uniformis gyrB gene for DNA gyrase subunit B, partial cds Length = 1254 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 ggcgtggcggcggccgcggcgg 230 |||||||||||||||||||||| Sbjct: 398 ggcgtggcggcggccgcggcgg 377
>gb|BC052024.1| Mus musculus SRY-box containing gene 3, mRNA (cDNA clone IMAGE:6403743), partial cds Length = 2083 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 1041 ggcggcggccgcggcggaggg 1021
>ref|XM_464450.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1359 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 ggcgtggcggcggccgcggcggagg 233 |||||||||||||| |||||||||| Sbjct: 703 ggcgtggcggcggcggcggcggagg 727
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11, complete sequence Length = 146677 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tccgccgtcctcctcgccacc 138 ||||||||||||||||||||| Sbjct: 108313 tccgccgtcctcctcgccacc 108293
>ref|XM_869713.1| PREDICTED: Bos taurus similar to low density lipoprotein receptor-related protein 11 (LOC617450), partial mRNA Length = 1050 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 cccgggccgcgggggcggcggctac 261 |||||||| |||||||||||||||| Sbjct: 588 cccgggccccgggggcggcggctac 612
>ref|NM_009237.1| Mus musculus SRY-box containing gene 3 (Sox3), mRNA Length = 1128 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 819 ggcggcggccgcggcggaggg 799
>gb|BC063061.1| Mus musculus SRY-box containing gene 3, mRNA (cDNA clone IMAGE:5717161), partial cds Length = 2077 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 1038 ggcggcggccgcggcggaggg 1018
>emb|CR699654.2|CNS0G2SY Tetraodon nigroviridis full-length cDNA Length = 1190 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggagg 233 ||||||||||||||||||||| Sbjct: 183 tggcggcggccgcggcggagg 203
>emb|CR696472.2|CNS0G0CK Tetraodon nigroviridis full-length cDNA Length = 1183 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggagg 233 ||||||||||||||||||||| Sbjct: 185 tggcggcggccgcggcggagg 205
>emb|CR687259.2|CNS0FT8N Tetraodon nigroviridis full-length cDNA Length = 1133 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggagg 233 ||||||||||||||||||||| Sbjct: 183 tggcggcggccgcggcggagg 203
>emb|CR684310.2|CNS0FQYQ Tetraodon nigroviridis full-length cDNA Length = 1190 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggagg 233 ||||||||||||||||||||| Sbjct: 184 tggcggcggccgcggcggagg 204
>gb|AF352564.2| Pseudorabies virus immediate-early protein IE180 gene, complete cds Length = 6281 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 5985 ggcggcggccgcggcggaggg 6005
>emb|X94125.1|MMSOX3 M.musculus SOX3 gene Length = 1150 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 841 ggcggcggccgcggcggaggg 821
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggagg 233 ||||||||||||||||||||| Sbjct: 76302 tggcggcggccgcggcggagg 76322
>gb|AE011870.1| Xanthomonas axonopodis pv. citri str. 306, section 248 of 469 of the complete genome Length = 12902 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 gcggccggtggggctgctgccgccgtggg 297 ||||||||||| ||||||| ||||||||| Sbjct: 4401 gcggccggtggcgctgctggcgccgtggg 4429
>gb|AF434675.1| Mus musculus transcription factor SOX3 (Sox3) gene, complete cds Length = 18632 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 6154 ggcggcggccgcggcggaggg 6134
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 141751 ggcggcggccgcggcggaggg 141771 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 102851 ggcggcggccgcggcggaggg 102831
>gb|BC096018.1| Mus musculus SRY-box containing gene 3, mRNA (cDNA clone IMAGE:6829907), partial cds Length = 2047 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 1002 ggcggcggccgcggcggaggg 982
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 118 tccgccgtcctcctcgccaccgcggcctc 146 ||||||||||||||| ||||||| ||||| Sbjct: 2192438 tccgccgtcctcctctccaccgccgcctc 2192466
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tccgccgtcctcctcgccacc 138 ||||||||||||||||||||| Sbjct: 9336368 tccgccgtcctcctcgccacc 9336348 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 25622216 tggcggcggccgcggcggag 25622235
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 118 tccgccgtcctcctcgccaccgcggcctc 146 ||||||||||||||| ||||||| ||||| Sbjct: 36974787 tccgccgtcctcctctccaccgccgcctc 36974759
>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1402_H07 Length = 140620 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 118 tccgccgtcctcctcgccaccgcggcctc 146 ||||||||||||||| ||||||| ||||| Sbjct: 65091 tccgccgtcctcctctccaccgccgcctc 65063
>dbj|AP005585.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B11 Length = 179858 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 118 tccgccgtcctcctcgccaccgcggcctc 146 ||||||||||||||| ||||||| ||||| Sbjct: 54276 tccgccgtcctcctctccaccgccgcctc 54304
>dbj|AB108674.1| Mus musculus Sox3 mRNA for transcriptional factor SOX3, complete cds Length = 1128 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 819 ggcggcggccgcggcggaggg 799
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 ggcgtggcggcggccgcggcggagg 233 |||||||||||||| |||||||||| Sbjct: 44114 ggcgtggcggcggcggcggcggagg 44138
>emb|X15120.1|HEPVIE Pseudorabies virus immediate-early gene Length = 5123 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 4971 ggcggcggccgcggcggaggg 4991
>gb|AY107648.1| Zea mays PCO091217 mRNA sequence Length = 1343 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 cgtccgccgtcctcctcgcca 136 ||||||||||||||||||||| Sbjct: 62 cgtccgccgtcctcctcgcca 82
>gb|AY104712.1| Zea mays PCO072958 mRNA sequence Length = 772 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 272 gccggtggggctgctgccgccgtgggtaccacggcgactgc 312 ||||||||||||||||| ||| |||||||| |||| |||| Sbjct: 355 gccggtggggctgctgcaaccgcgggtaccatggcggctgc 395
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gcgtggcggcggccgcggcgg 230 ||||||||||||||||||||| Sbjct: 28301 gcgtggcggcggccgcggcgg 28321
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 1598937 ggcggcggccgcggcggaggg 1598917
>emb|AL807233.10| Mouse DNA sequence from clone RP23-174O19 on chromosome X, complete sequence Length = 195054 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 128678 ggcggcggccgcggcggaggg 128698
>gb|M81222.1|SH1SEQ Herpesvirus-pseudorabies virus mRNA sequence Length = 4968 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 4907 ggcggcggccgcggcggaggg 4887
>gb|M34651.1|SH1PROIE Pseudorabies virus with upstream and downsteam sequences Length = 15141 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 10175 ggcggcggccgcggcggaggg 10195
>gb|M57505.1|SH1LLT Pseudorabies virus ORF1, ORF2, and ORF3 mRNA, complete cds Length = 8438 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 2093 ggcggcggccgcggcggaggg 2073
>gb|M25527.1|SH1EGB Pseudorabiesvirus immediate-early gene DNA sequence Length = 217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 62 ggcggcggccgcggcggaggg 82
>gb|L24958.1|SH1ULTRJ Pseudorabies virus long terminal repeat junction Length = 2080 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggaggg 234 ||||||||||||||||||||| Sbjct: 2019 ggcggcggccgcggcggaggg 1999
>gb|BC052392.1| Mus musculus RAN binding protein 5, mRNA (cDNA clone MGC:63401 IMAGE:5719784), complete cds Length = 4539 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 5 tggcggcggccgcggcggag 24
>ref|XM_480091.1| Oryza sativa (japonica cultivar-group), mRNA Length = 474 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 tcctcctcgccaccgcggcc 144 |||||||||||||||||||| Sbjct: 161 tcctcctcgccaccgcggcc 142
>ref|XM_468025.1| Oryza sativa (japonica cultivar-group), mRNA Length = 357 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cgccgtcctcctcgccaccg 139 |||||||||||||||||||| Sbjct: 82 cgccgtcctcctcgccaccg 63
>ref|XM_463921.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2182 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 310 ggcggcggccgcggcggagg 291
>ref|NM_195885.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBb0052C09.8), mRNA Length = 1545 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 84 ggcggcggccgcggcggagg 103
>ref|XM_469537.1| Oryza sativa (japonica cultivar-group), mRNA Length = 345 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ctgctcgccgtcctcctcgc 116 |||||||||||||||||||| Sbjct: 37 ctgctcgccgtcctcctcgc 56
>ref|NM_193019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 741 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 12 ggcggcggccgcggcggagg 31
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccggcaatggcgtccaccaa 86 |||||||||||||||||||| Sbjct: 1178038 ccggcaatggcgtccaccaa 1178019
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 138623 tggcggcggccgcggcggag 138642
>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0052C09, complete sequence Length = 139468 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 71544 ggcggcggccgcggcggagg 71525
>gb|BC001497.2| Homo sapiens RAN binding protein 5, mRNA (cDNA clone MGC:2068 IMAGE:2823581), complete cds Length = 3388 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 4 tggcggcggccgcggcggag 23
>gb|BC019309.1| Homo sapiens RAN binding protein 5, mRNA (cDNA clone IMAGE:2823581), partial cds Length = 3388 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 4 tggcggcggccgcggcggag 23
>gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0079P23, complete sequence Length = 125090 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggagggtac 237 ||||||||| |||||||||||||| Sbjct: 29992 ggcggcggcggcggcggagggtac 30015
>ref|XM_417816.1| PREDICTED: Gallus gallus similar to dJ1174N9.1 (novel protein with IBR domain) (LOC419669), mRNA Length = 2223 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tcctgctcgccgtcctcctc 114 |||||||||||||||||||| Sbjct: 1697 tcctgctcgccgtcctcctc 1678
>ref|XM_414205.1| PREDICTED: Gallus gallus similar to ankyrin repeat domain 11; nasopharyngeal carcinoma susceptibility protein; ankyrin repeat-containing protein 11 (LOC415845), mRNA Length = 9564 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gacaaggaggggaaggtggt 179 |||||||||||||||||||| Sbjct: 3202 gacaaggaggggaaggtggt 3221
>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07, complete sequence Length = 147122 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 34585 tggcggcggccgcggcggag 34604
>gb|AY427787.1| Bos taurus paternally expressed gene 3 (Peg3) mRNA, complete cds Length = 11076 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cgtggcggcggccgcggcgg 230 |||||||||||||||||||| Sbjct: 6927 cgtggcggcggccgcggcgg 6908
>ref|NM_178700.2| Mus musculus G-rich RNA sequence binding factor 1 (Grsf1), mRNA Length = 2529 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cgtggcggcggccgcggcgg 230 |||||||||||||||||||| Sbjct: 337 cgtggcggcggccgcggcgg 318
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ctgctcgccgtcctcctcgc 116 |||||||||||||||||||| Sbjct: 28587621 ctgctcgccgtcctcctcgc 28587640 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cgtggcggcggccgcggcgg 230 |||||||||||||||||||| Sbjct: 4532443 cgtggcggcggccgcggcgg 4532462
>gb|AC164603.4| Mus musculus chromosome 8, clone RP24-114E3, complete sequence Length = 164927 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ccaaggctctcttcctgctc 102 |||||||||||||||||||| Sbjct: 20451 ccaaggctctcttcctgctc 20470
>ref|XM_001006286.1| PREDICTED: Mus musculus similar to paternally expressed 3 (LOC677625), mRNA Length = 1116 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cgtggcggcggccgcggcgg 230 |||||||||||||||||||| Sbjct: 501 cgtggcggcggccgcggcgg 482
>ref|XM_542647.2| PREDICTED: Canis familiaris similar to RAN binding protein 5, transcript variant 1 (LOC485528), mRNA Length = 5104 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 234 tggcggcggccgcggcggag 253
>ref|XM_854438.1| PREDICTED: Canis familiaris similar to RAN binding protein 5, transcript variant 2 (LOC485528), mRNA Length = 4791 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 2 tggcggcggccgcggcggag 21
>emb|CR956415.12| Pig DNA sequence from clone PigE-223M7 on chromosome 6, complete sequence Length = 209049 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccgggccgcgggggcggcgg 257 |||||||||||||||||||| Sbjct: 26458 ccgggccgcgggggcggcgg 26439
>gb|AC125222.4| Mus musculus BAC clone RP23-83G5 from 8, complete sequence Length = 177435 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ccaaggctctcttcctgctc 102 |||||||||||||||||||| Sbjct: 53959 ccaaggctctcttcctgctc 53940
>ref|NM_001037817.1| Bos taurus RAN binding protein 6 (RANBP6), mRNA Length = 2031 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 28 tggcggcggccgcggcggag 47
>gb|AF143772.2| Mycobacterium avium strain 2151 glycopeptidolipid biosynthesis and daunorubicin resistance gene clusters and insertion sequences IS1601, IS1245 and IS1348, complete sequence Length = 71286 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ggggaaggtggtgaccaacg 187 |||||||||||||||||||| Sbjct: 39854 ggggaaggtggtgaccaacg 39835
>ref|NM_023579.2| Mus musculus RAN binding protein 5 (Ranbp5), mRNA Length = 4539 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 5 tggcggcggccgcggcggag 24
>emb|AL356580.13| Human DNA sequence from clone RP11-383H17 on chromosome 13 Contains a 60S ribosomal protein L7A (RPL7A) pseudogene, the 5' end of the KPNB3 gene for karyopherin (importin) beta 3, a pseudogene similar to part of ferritin light polypeptide (FTL) and a CpG island, complete sequence Length = 161072 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 120869 tggcggcggccgcggcggag 120888
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 12158 ggcggcggccgcggcggagg 12177
>gb|AY920629.1| Uncultured bacterium clone LW-fhcD-BF1 formyltransferase/hydrolase complex subunit D (fhcD) gene, partial cds Length = 824 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ccgggccgcgggggcggcgg 257 |||||||||||||||||||| Sbjct: 501 ccgggccgcgggggcggcgg 520
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gtggcggcggccgcggcgga 231 |||||||||||||||||||| Sbjct: 275078 gtggcggcggccgcggcgga 275059
>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14 Length = 308050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gtggcggcggccgcggcgga 231 |||||||||||||||||||| Sbjct: 253275 gtggcggcggccgcggcgga 253256
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cgggccgcgggggcggcggc 258 |||||||||||||||||||| Sbjct: 215740 cgggccgcgggggcggcggc 215721
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 217483 ggcggcggccgcggcggagg 217464
>gb|BC045640.1| Homo sapiens RAN binding protein 5, mRNA (cDNA clone MGC:41882 IMAGE:5298410), complete cds Length = 3592 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 217 tggcggcggccgcggcggag 236
>emb|AJ131707.2|SGA131707 Streptomyces galbus fda gene, strain DSM 40480 Length = 1604 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cgccgtcctcctcgccaccg 139 |||||||||||||||||||| Sbjct: 991 cgccgtcctcctcgccaccg 972
>emb|AJ864704.1| Saccharum officinarum mRNA for beta-2-xylosyltransferase (xt1 gene) Length = 1916 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cgggccgcgggggcggcggc 258 |||||||||||||||||||| Sbjct: 374 cgggccgcgggggcggcggc 393
>emb|CR859567.1| Pongo pygmaeus mRNA; cDNA DKFZp459E174 (from clone DKFZp459E174) Length = 4048 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 99 tggcggcggccgcggcggag 118
>gb|BC107531.1| Bos taurus cDNA clone IMAGE:7984416, complete cds Length = 2031 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 28 tggcggcggccgcggcggag 47
>ref|NM_002271.4| Homo sapiens RAN binding protein 5 (RANBP5), mRNA Length = 6019 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 236 tggcggcggccgcggcggag 255
>dbj|AK161668.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730467P14 product:karyopherin (importin) beta 3, full insert sequence Length = 3810 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 114 tggcggcggccgcggcggag 133
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cgtggcggcggccgcggcgg 230 |||||||||||||||||||| Sbjct: 3782636 cgtggcggcggccgcggcgg 3782655
>dbj|AK169664.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005F13 product:karyopherin (importin) beta 3, full insert sequence Length = 3925 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 30 tggcggcggccgcggcggag 49
>dbj|AK167303.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530001K04 product:karyopherin (importin) beta 3, full insert sequence Length = 3920 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 24 tggcggcggccgcggcggag 43
>dbj|AB168736.1| Macaca fascicularis testis cDNA, clone: QtsA-14470, similar to human protein phosphatase 3 (formerly 2B), catalytic subunit,gamma isoform (calcineurin A gamma) (PPP3CC), mRNA, RefSeq: NM_005605.3 Length = 2256 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 299 ggcggcggccgcggcggagg 318
>dbj|AK077782.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830450A15 product:GRSF-1 protein (fragment) homolog [Homo sapiens], full insert sequence Length = 2529 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cgtggcggcggccgcggcgg 230 |||||||||||||||||||| Sbjct: 337 cgtggcggcggccgcggcgg 318
>emb|CR387074.1| Gallus gallus finished cDNA, clone ChEST120l1 Length = 906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gacaaggaggggaaggtggt 179 |||||||||||||||||||| Sbjct: 236 gacaaggaggggaaggtggt 255
>emb|CR385263.1| Gallus gallus finished cDNA, clone ChEST548p18 Length = 1389 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tcctgctcgccgtcctcctc 114 |||||||||||||||||||| Sbjct: 803 tcctgctcgccgtcctcctc 784
>dbj|AK049422.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430006H22 product:karyopherin (importin) beta 3, full insert sequence Length = 3931 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 34 tggcggcggccgcggcggag 53
>dbj|AK079134.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430062O17 product:karyopherin (importin) beta 3, full insert sequence Length = 4416 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 32 tggcggcggccgcggcggag 51
>dbj|AK053681.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130120N09 product:karyopherin (importin) beta 3, full insert sequence Length = 3925 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 27 tggcggcggccgcggcggag 46
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggagggtac 237 ||||||||| |||||||||||||| Sbjct: 25091528 ggcggcggcggcggcggagggtac 25091551 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 24396831 ggcggcggccgcggcggagg 24396812
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 9719019 ggcggcggccgcggcggagg 9719000
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 tcctcctcgccaccgcggcc 144 |||||||||||||||||||| Sbjct: 2688077 tcctcctcgccaccgcggcc 2688058
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 25864816 ggcggcggccgcggcggagg 25864835
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 atctagctagctcttgttag 61 |||||||||||||||||||| Sbjct: 511901 atctagctagctcttgttag 511920
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ctgctcgccgtcctcctcgc 116 |||||||||||||||||||| Sbjct: 28678945 ctgctcgccgtcctcctcgc 28678964 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cgtggcggcggccgcggcgg 230 |||||||||||||||||||| Sbjct: 4532558 cgtggcggcggccgcggcgg 4532577
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cgtggcggcggccgcggcgg 230 |||||||||||||||||||| Sbjct: 137735 cgtggcggcggccgcggcgg 137754
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cgccgtcctcctcgccaccg 139 |||||||||||||||||||| Sbjct: 2114979 cgccgtcctcctcgccaccg 2114960
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgctcgccgtcctcctcgc 116 |||||||||||||||||||| Sbjct: 111275 ctgctcgccgtcctcctcgc 111256
>ref|XM_224534.3| PREDICTED: Rattus norvegicus karyopherin (importin) beta 3 (predicted) (Kpnb3_predicted), mRNA Length = 4882 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 275 tggcggcggccgcggcggag 294
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 gccgtcctcctcgccaccgcggcctccg 148 ||||||||||||||| ||||| |||||| Sbjct: 2267189 gccgtcctcctcgccgccgcgccctccg 2267162
>gb|AY190941.1| Drosophila erecta clone DERF01_12_N08 (D1431) genomic sequence Length = 43101 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 28663 ggcggcggccgcggcggagg 28644
>gb|AC154283.1| Mus musculus BAC clone RP24-279H4 from chromosome 14, complete sequence Length = 192706 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 59580 tggcggcggccgcggcggag 59561
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cgccgtcctcctcgccaccg 139 |||||||||||||||||||| Sbjct: 7510 cgccgtcctcctcgccaccg 7529
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 107507 ggcggcggccgcggcggagg 107488
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cgccgtcctcctcgccaccg 139 |||||||||||||||||||| Sbjct: 2770758 cgccgtcctcctcgccaccg 2770777
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccggcaatggcgtccaccaa 86 |||||||||||||||||||| Sbjct: 1133145 ccggcaatggcgtccaccaa 1133126
>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0514G12 Length = 138929 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 atctagctagctcttgttag 61 |||||||||||||||||||| Sbjct: 57409 atctagctagctcttgttag 57428
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tgctcgccgtcctcctcgcg 117 |||||||||||||||||||| Sbjct: 975226 tgctcgccgtcctcctcgcg 975207
>dbj|AP005741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470H09 Length = 141257 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 tcctcctcgccaccgcggcc 144 |||||||||||||||||||| Sbjct: 66358 tcctcctcgccaccgcggcc 66339
>ref|NM_001002887.1| Bos taurus paternally expressed gene 3 (PEG3), mRNA Length = 11076 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cgtggcggcggccgcggcgg 230 |||||||||||||||||||| Sbjct: 6927 cgtggcggcggccgcggcgg 6908
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cgccgtcctcctcgccaccg 139 |||||||||||||||||||| Sbjct: 46633 cgccgtcctcctcgccaccg 46652
>emb|BX648222.1|HSM808370 Homo sapiens mRNA; cDNA DKFZp686O1576 (from clone DKFZp686O1576) Length = 3425 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 66 tggcggcggccgcggcggag 85
>dbj|AK109567.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-D10, full insert sequence Length = 2181 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 310 ggcggcggccgcggcggagg 291
>dbj|AK105578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E01, full insert sequence Length = 1782 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 130 ggcggcggccgcggcggagg 149
>dbj|AK101515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F12, full insert sequence Length = 2211 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 tccgccgtcctcctcgccaccgcg 141 ||||||| |||||||||||||||| Sbjct: 71 tccgccgccctcctcgccaccgcg 94
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 35264 ggcggcggccgcggcggagg 35283
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 gcgtggcggcggccgcggcg 229 |||||||||||||||||||| Sbjct: 2597605 gcgtggcggcggccgcggcg 2597586
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ggggaaggtggtgaccaacg 187 |||||||||||||||||||| Sbjct: 1305075 ggggaaggtggtgaccaacg 1305056
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 9725058 ggcggcggccgcggcggagg 9725039
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 ggcggcggccgcggcggagggtac 237 ||||||||| |||||||||||||| Sbjct: 25402547 ggcggcggcggcggcggagggtac 25402570 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggcggcggccgcggcggagg 233 |||||||||||||||||||| Sbjct: 24708500 ggcggcggccgcggcggagg 24708481
>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence Length = 53591 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 gtggcggcggccgcggcggagggt 235 ||||||||||| |||||||||||| Sbjct: 34890 gtggcggcggcggcggcggagggt 34913
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccggcaatggcgtccaccaa 86 |||||||||||||||||||| Sbjct: 1127889 ccggcaatggcgtccaccaa 1127870
>emb|Y08890.1|HSRANBP5 Homo spaiens mRNA for Ran_GTP binding protein 5 (RanBP5(Importin5) gene) Length = 4826 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggcggcggccgcggcggag 232 |||||||||||||||||||| Sbjct: 238 tggcggcggccgcggcggag 257 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,943,601 Number of Sequences: 3902068 Number of extensions: 3943601 Number of successful extensions: 99550 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 146 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94985 Number of HSP's gapped (non-prelim): 4554 length of query: 462 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 440 effective length of database: 17,147,199,772 effective search space: 7544767899680 effective search space used: 7544767899680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)