ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl22d11 |
|---|---|
| Clone Library Name | barley_pub |
>AP2B1_RAT (P62944) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 Score = 90.5 bits (223), Expect = 9e-19 Identities = 45/55 (81%), Positives = 50/55 (90%) Frame = +3 Query: 195 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNC 359 DSKYF+T KKGEI ELK ELN++ K+KRK+AVKKVIAAMTVGKDVSSLF DVVNC Sbjct: 3 DSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNC 57
>AP2B1_MOUSE (Q9DBG3) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 Score = 90.5 bits (223), Expect = 9e-19 Identities = 45/55 (81%), Positives = 50/55 (90%) Frame = +3 Query: 195 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNC 359 DSKYF+T KKGEI ELK ELN++ K+KRK+AVKKVIAAMTVGKDVSSLF DVVNC Sbjct: 3 DSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNC 57
>AP2B1_HUMAN (P63010) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 Score = 90.5 bits (223), Expect = 9e-19 Identities = 45/55 (81%), Positives = 50/55 (90%) Frame = +3 Query: 195 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNC 359 DSKYF+T KKGEI ELK ELN++ K+KRK+AVKKVIAAMTVGKDVSSLF DVVNC Sbjct: 3 DSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNC 57
>AP1B1_RAT (P52303) AP-1 complex subunit beta-1 (Adapter-related protein| complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta large Length = 949 Score = 89.4 bits (220), Expect = 2e-18 Identities = 44/55 (80%), Positives = 50/55 (90%) Frame = +3 Query: 195 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNC 359 DSKYF+TTKKGEI ELK ELNS K+K+K+AVKKVIA+MTVGKDVS+LF DVVNC Sbjct: 3 DSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNC 57
>AP1B1_HUMAN (Q10567) AP-1 complex subunit beta-1 (Adapter-related protein| complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta larg Length = 949 Score = 89.4 bits (220), Expect = 2e-18 Identities = 44/55 (80%), Positives = 50/55 (90%) Frame = +3 Query: 195 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNC 359 DSKYF+TTKKGEI ELK ELNS K+K+K+AVKKVIA+MTVGKDVS+LF DVVNC Sbjct: 3 DSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNC 57
>AP1B1_MOUSE (O35643) AP-1 complex subunit beta-1 (Adapter-related protein| complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta larg Length = 943 Score = 89.4 bits (220), Expect = 2e-18 Identities = 44/55 (80%), Positives = 50/55 (90%) Frame = +3 Query: 195 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNC 359 DSKYF+TTKKGEI ELK ELNS K+K+K+AVKKVIA+MTVGKDVS+LF DVVNC Sbjct: 3 DSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNC 57
>AP1B1_SCHPO (O43079) AP-1 complex subunit beta-1 (Beta(1)-adaptin) (Clathrin| assembly protein large beta-1 chain) (Clathrin assembly protein complex 1 beta-1 large chain) Length = 683 Score = 58.5 bits (140), Expect = 4e-09 Identities = 32/52 (61%), Positives = 37/52 (71%) Frame = +3 Query: 198 SKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVV 353 S F KK E EL++ L SQY +R DAVK+ IAAMTVGKDVSSLF DV+ Sbjct: 8 SSRFKAFKKSETSELQKGLVSQYAYERIDAVKRTIAAMTVGKDVSSLFPDVL 59
>AP1B1_YEAST (P36000) AP-1 complex subunit beta-1 (Beta(1)-adaptin) (Clathrin| assembly protein large beta-1 chain) (Clathrin assembly protein complex 1 beta-1 large chain) Length = 726 Score = 56.6 bits (135), Expect = 1e-08 Identities = 28/44 (63%), Positives = 33/44 (75%) Frame = +3 Query: 222 KGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVV 353 KGE+ EL+ L SQY RKDA+KK I MT+GKDVSSLF DV+ Sbjct: 25 KGELSELRTGLVSQYPQTRKDAIKKTIQQMTLGKDVSSLFPDVL 68
>AP2B1_BOVIN (P63009) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) (Fragment) Length = 236 Score = 48.9 bits (115), Expect = 3e-06 Identities = 24/25 (96%), Positives = 24/25 (96%) Frame = +3 Query: 285 AVKKVIAAMTVGKDVSSLFTDVVNC 359 AVKKVIAAMTVGKDVSSLF DVVNC Sbjct: 1 AVKKVIAAMTVGKDVSSLFPDVVNC 25
>ATIN_BHV1P (P30020) Alpha trans-inducing protein (Alpha-TIF)| Length = 504 Score = 31.2 bits (69), Expect = 0.65 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -3 Query: 94 ARGGGRPACLRDGMGLDSARGSQAGVRAC 8 ARGG P+ +R G+GL ARGS AC Sbjct: 439 ARGGPGPSPVRSGLGLSRARGSPGPGPAC 467
>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 30.8 bits (68), Expect = 0.85 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -3 Query: 181 SPRRAYLPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDG 56 +PR + N ++P A PG GG R A G P R G Sbjct: 226 TPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSG 267
>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 30.8 bits (68), Expect = 0.85 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -3 Query: 181 SPRRAYLPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDG 56 +PR + N ++P A PG GG R A G P R G Sbjct: 226 TPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSG 267
>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 30.8 bits (68), Expect = 0.85 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -3 Query: 181 SPRRAYLPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDG 56 +PR + N ++P A PG GG R A G P R G Sbjct: 226 TPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSG 267
>AP3B2_MOUSE (Q9JME5) AP-3 complex subunit beta-2 (Adapter-related protein| complex 3 beta-2 subunit) (Beta3B-adaptin) (Adaptor protein complex AP-3 beta-2 subunit) (Clathrin assembly protein complex 3 beta-2 large chain) Length = 1082 Score = 30.8 bits (68), Expect = 0.85 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Frame = +3 Query: 189 GHDSK---YFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVV 353 GHD FS+ K +LKE L++ + +A+K+++A + GK+ S LF VV Sbjct: 23 GHDPASGGIFSSDYKRH-DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVV 79
>AP3B2_HUMAN (Q13367) AP-3 complex subunit beta-2 (Adapter-related protein| complex 3 beta-2 subunit) (Beta3B-adaptin) (Adaptor protein complex AP-3 beta-2 subunit) (AP-3 complex beta-2 subunit) (Clathrin assembly protein complex 3 beta-2 large chain) (Neu Length = 1082 Score = 30.8 bits (68), Expect = 0.85 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Frame = +3 Query: 189 GHDSK---YFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVV 353 GHD FS+ K +LKE L++ + +A+K+++A + GK+ S LF VV Sbjct: 23 GHDPASGGIFSSDYKRH-DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVV 79
>AP3B_ASHGO (Q759E2) AP-3 complex subunit beta (Beta-adaptin) (Adapter-related| protein complex 3 beta subunit) (Clathrin assembly protein large beta chain) (Clathrin assembly protein complex 3 beta large chain) Length = 781 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Frame = +3 Query: 195 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGK---DVSSLFTDVV 353 +S YF +K + L LNS+Y + +D +K+V++ M G ++ + F D+V Sbjct: 32 ESSYFHYSKSIDSESLPGLLNSRYTREVRDGMKRVMSLMGSGDSSIELETHFADIV 87
>KINH_STRPU (P35978) Kinesin heavy chain| Length = 1031 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -3 Query: 151 HRSPPPAAEPGVRDGGLRYARGGGRP 74 H P P G+R GG RGGG P Sbjct: 925 HPPPSPGGSTGIRGGGYSGIRGGGSP 950
>VCOM_ADEM1 (O10442) Minor core protein (Protein V) (pV)| Length = 228 Score = 29.3 bits (64), Expect = 2.5 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = +2 Query: 23 RLAPPRRVQSHPIAQTGRPPATARISEASITNPGLRSRRR 142 R PP V+ HP + RPPA A I+ P R RRR Sbjct: 130 RAVPPVGVRYHPSIEVARPPA------ARISPPRRRRRRR 163
>RENBP_PIG (P17560) N-acylglucosamine 2-epimerase (EC 5.1.3.8) (GlcNAc| 2-epimerase) (N-acetyl-D-glucosamine 2-epimerase) (AGE) (Renin-binding protein) (RnBP) Length = 402 Score = 29.3 bits (64), Expect = 2.5 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 4/86 (4%) Frame = +2 Query: 17 HTRLAPPRRVQSHPIAQTGRPPATAR--ISEASITNPGLRSRRR*PVCIWQVGSPGRYER 190 H R+APP + + + + GRP R SE T +W+V + RY+ Sbjct: 94 HARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNE--------LWRVTAEARYQS 145 Query: 191 ARLQVL--LHHQKGGDPRAQGGAQLP 262 + ++ + H DP G QLP Sbjct: 146 EAVDMMDQIVHWVREDPSGLGRPQLP 171
>RNZ_BRAJA (Q89NF8) Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3| endonuclease) Length = 301 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -3 Query: 151 HRSPPPAAEPGVRDGGLRYARGGGRPACLRDGMGLD 44 H P A GV DG LR GRP + DG +D Sbjct: 157 HLLPDRLASLGVPDGPLRGELAQGRPVVIEDGRTID 192
>ROCK1_PANTR (P61584) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (Fragment) Length = 1003 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 201 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 299 +YFST K ++ ELKEE+ ++K ++ +KK+ Sbjct: 499 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 527
>NELFA_HUMAN (Q9H3P2) Negative elongation factor A (NELF-A) (Wolf-Hirschhorn| syndrome candidate 2 protein) Length = 549 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -3 Query: 226 PFLVVEKYLESCPLISPRRAYLPNTHRSPPPAAEPGVR 113 P L YL S P + P +Y+P++ P P++ R Sbjct: 338 PALPSTSYLPSTPSVVPASSYIPSSETPPAPSSREASR 375
>TARSH_HUMAN (Q7Z7G0) Target of Nesh-SH3 precursor (Tarsh) (Nesh-binding| protein) (NeshBP) (ABI gene family member 3-binding protein) Length = 1075 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +2 Query: 35 PRRVQSHPIAQTGRPPATARISEASITNPGLRSRRR 142 PRR P TG+P + IS IT P LRS R Sbjct: 716 PRRKPLPPNNVTGKPGSAGIISSGPITTPPLRSTPR 751
>ROCK1_BOVIN (Q8MIT6) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (Fragment) Length = 441 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 201 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 299 +YFST K ++ ELKEE+ ++K ++ +KK+ Sbjct: 257 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 285
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Frame = -3 Query: 190 PLISPRRAYLPNTHRSP--PPAAEPGVRDGGLRYARGGG 80 P + PR A P R P P A G+R G R+ GG Sbjct: 2449 PPLGPRYAVFPKDQRGPYPPDVASMGMRPHGFRFGFPGG 2487
>LEA2_CICAR (O49817) Late embryogenesis abundant protein 2 (CapLEA-2)| Length = 155 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = +3 Query: 183 MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSS 335 M+ HD Y + KG E ++ +DK + A +K A KD +S Sbjct: 1 MTSHDQSYRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTS 51
>ROCK1_RABIT (O77819) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (cAMP-dependent protein kinase ROCK-I) (CePKA) (Corneal epithelial Rho-associated-Ser/Thr kinase 1) (HEB Length = 1354 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 201 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 299 +YFST K ++ ELKEE+ ++K ++ +KK+ Sbjct: 850 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 878
>ROCK1_HUMAN (Q13464) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (NY-REN-35 antigen) Length = 1354 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 201 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 299 +YFST K ++ ELKEE+ ++K ++ +KK+ Sbjct: 850 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 878
>NOLA1_HUMAN (Q9NY12) H/ACA ribonucleoprotein complex subunit 1 (Nucleolar| protein family A member 1) (snoRNP protein GAR1) Length = 217 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/48 (39%), Positives = 20/48 (41%) Frame = -3 Query: 163 LPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDGMGLDSARGSQAG 20 LP P P E G GG R RGGGR R G RG + G Sbjct: 152 LPLQRFLPRPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGG 199
>DPOLA_ORYSA (O48653) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| Length = 1534 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = -3 Query: 223 FLVVEKYLESCPLISPRRAYLPNTHRSPPPAAEPGVRDGGLRYARG 86 F+V +K+ S S +R P+T + P A+P + D G +G Sbjct: 852 FIVPDKFARSKEFNSTKRKMNPDTEAARPDEADPSIDDEGHHVDQG 897
>CCNA2_CHICK (P43449) Cyclin-A2 (Cyclin-A)| Length = 395 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = -3 Query: 163 LPNTHRSPPPAAEPGVRDGGLR--YARGGGRPACLRDGMGLDSARGSQ 26 +P ++PPPAA V G LR AR G R+G G +A G Q Sbjct: 11 VPPAAKAPPPAAGTRVALGLLRGGPARPGPAAQAARNGEGRGAAAGQQ 58
>ZSWM4_HUMAN (Q9H7M6) Zinc finger SWIM domain-containing protein 4| Length = 989 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/34 (47%), Positives = 16/34 (47%) Frame = -3 Query: 160 PNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRD 59 P RS A P RD G ARG GRP L D Sbjct: 4 PAAKRSRGCPAGPEERDAGAGAARGRGRPEALLD 37
>NELFA_MOUSE (Q8BG30) Negative elongation factor A (NELF-A) (Wolf-Hirschhorn| syndrome candidate 2 homolog) (mWHSC2) Length = 530 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = -3 Query: 226 PFLVVEKYLESCPLISPRRAYLPNTHRSPPPAAEPGVR 113 P L YL S P + P +Y+P++ P P + R Sbjct: 317 PTLPSTSYLPSTPSVVPASSYIPSSETPPAPPSREASR 354
>KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-associated| protein 5.11) (Ultrahigh sulfur keratin-associated protein 5.11) Length = 156 Score = 27.3 bits (59), Expect = 9.4 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +2 Query: 284 CCQESDCSNDCWKRCLIIVYGCCE 355 CCQ S C + C+K C CC+ Sbjct: 126 CCQSSCCQSSCFKPC------CCQ 143
>MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)| Length = 1147 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 3/53 (5%) Frame = -3 Query: 169 AYLPNTHRSPPPAAEPGVRDGGLRYARGG---GRPACLRDGMGLDSARGSQAG 20 A +P+ R P PG GG RGG G P R G G+ G G Sbjct: 969 AAVPSAGRGGPGMGGPGAGRGGPGMGRGGPGMGGPGAGRGGPGMGGPGGPGRG 1021
>1433_HELAN (O65352) 14-3-3-like protein| Length = 259 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +3 Query: 177 GDMSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSS 335 G SG DSK F KG+ E + D+RK A + ++A +D+++ Sbjct: 117 GSASGGDSKVFYLKMKGDYYRYLAEFKT--GDERKLAAENTLSAYKAAQDIAN 167
>ROCK1_RAT (Q63644) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (p150 RhoA-binding kinase ROK beta) (Liver regeneration-related protein LRRG199) Length = 1369 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/33 (36%), Positives = 23/33 (69%) Frame = +3 Query: 201 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 299 +YFST K ++ ELKEE+ ++K ++ ++K+ Sbjct: 850 QYFSTLYKTQVKELKEEI----EEKNRENLRKI 878
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = +2 Query: 14 THTRLAPPRRVQSHPIAQTGRPPATARISEASITNP 121 T T PP S PI T PP T + + T P Sbjct: 1670 TTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTP 1705
>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)| (Ubiquitin thioesterase 51) (Ubiquitin-specific-processing protease 51) (Deubiquitinating enzyme 51) Length = 711 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = -3 Query: 142 PPPAAEPGVRDGGLRYARGGGRPACLRDGMGLDSARGSQAGV 17 PPPA P G R +R G RP R G G G+ Sbjct: 138 PPPAPRPRAWRGSRRRSRPGSRPQTRRSCSGDLDGSGDPGGL 179
>ROCK1_MOUSE (P70335) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) Length = 1354 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/33 (36%), Positives = 23/33 (69%) Frame = +3 Query: 201 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 299 +YFST K ++ ELKEE+ ++K ++ ++K+ Sbjct: 850 QYFSTLYKTQVKELKEEI----EEKNRENLRKI 878 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,552,624 Number of Sequences: 219361 Number of extensions: 865552 Number of successful extensions: 3839 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3606 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3837 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
