Clone Name | bastl22d10 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane pro... | 49 | 5e-06 | 2 | AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane pro... | 39 | 0.005 | 3 | AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane pr... | 37 | 0.019 |
---|
>AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) Length = 762 Score = 48.5 bits (114), Expect = 5e-06 Identities = 23/23 (100%), Positives = 23/23 (100%) Frame = +3 Query: 99 MAILGELGTEILIPVCGVIGIVF 167 MAILGELGTEILIPVCGVIGIVF Sbjct: 1 MAILGELGTEILIPVCGVIGIVF 23
>AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) Length = 764 Score = 38.5 bits (88), Expect = 0.005 Identities = 18/22 (81%), Positives = 19/22 (86%) Frame = +3 Query: 102 AILGELGTEILIPVCGVIGIVF 167 AIL +LGTEILIPVC VIGI F Sbjct: 3 AILPDLGTEILIPVCAVIGIAF 24
>AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane proton pump 1| (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase 1) (H(+)-PPase 1) (Vacuolar proton pyrophosphatase 1) (Vacuolar proton pyrophosphatase 3) Length = 770 Score = 36.6 bits (83), Expect = 0.019 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = +3 Query: 90 LTAMAILGELGTEILIPVCGVIGIVF 167 + A A+L EL TEIL+P+C VIGI F Sbjct: 1 MVAPALLPELWTEILVPICAVIGIAF 26 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,835,337 Number of Sequences: 219361 Number of extensions: 87734 Number of successful extensions: 191 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 190 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 191 length of database: 80,573,946 effective HSP length: 31 effective length of database: 73,773,755 effective search space used: 1770570120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)